Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00123 and BL00853

See DNA alignment / Visit BSNT_00123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00123___yacB.1.5803.seq
#    -bsequence pep-align/BL00853___yacB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00123___yacB-BL00853___yacB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00123___yacB-BL00853___yacB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00123___yacB
# 2: BL00853___yacB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     225/258 (87.2%)
# Similarity:   244/258 (94.6%)
# Gaps:           6/258 ( 2.3%)
# Score: 1190.0
# 
#
#=======================================

BSNT_00123___      1 ------MGNTNTVLGVYHDGKLEYHWRIETSRHKTEDEFGMILRSLFDHS     44
                           :||||||||:||:|:||||||||||||||||||||:||||||:.
BL00853___yac      1 MLLVIDVGNTNTVLGIYHEGELEYHWRIETSRHKTEDEFGMLLRSLFDYV     50

BSNT_00123___     45 GLMFEQIDGIIISSVVPPIMFALERMCTKYFHIEPQIVGPGMKTGLNIKY     94
                     ||||:||:|||||||||||||:|||||.|||.||||||||||||||||||
BL00853___yac     51 GLMFDQIEGIIISSVVPPIMFSLERMCIKYFQIEPQIVGPGMKTGLNIKY    100

BSNT_00123___     95 DNPKEVGADRIVNAVAAIHLYGNPLIVVDFGTATTYCYIDENKQYMGGAI    144
                     ||||||||||||||||||||||:||||||||||||||||:|.|:||||||
BL00853___yac    101 DNPKEVGADRIVNAVAAIHLYGSPLIVVDFGTATTYCYINERKEYMGGAI    150

BSNT_00123___    145 APGITISTEALYSRAAKLPRIEITRPDNIIGKNTVSAMQSGILFGYVGQV    194
                     |||||||||||||||||||||||.|||:|:||:||||||||||:||||||
BL00853___yac    151 APGITISTEALYSRAAKLPRIEIARPDHIVGKSTVSAMQSGILYGYVGQV    200

BSNT_00123___    195 EGIVKRMKWQAKQEPKVIATGGLAPLIANESDCIDIVDPFLTLKGLELIY    244
                     ||||||||||:|:.||||||||||.|||:|||||||||||||||||||||
BL00853___yac    201 EGIVKRMKWQSKKNPKVIATGGLASLIADESDCIDIVDPFLTLKGLELIY    250

BSNT_00123___    245 ERNRVGSV    252
                     |||||.||
BL00853___yac    251 ERNRVESV    258


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