Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03485 and BL00781

See DNA alignment / Visit BSNT_03485 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_03485___spoVAC.1.5803.seq
#    -bsequence pep-align/BL00781___spoVAC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03485___spoVAC-BL00781___spoVAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03485___spoVAC-BL00781___spoVAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03485___spoVAC
# 2: BL00781___spoVAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     123/150 (82.0%)
# Similarity:   134/150 (89.3%)
# Gaps:           1/150 ( 0.7%)
# Score: 640.0
# 
#
#=======================================

BSNT_03485___      1 MTNIKENYKSKVKTYQPKPPYVWNCVKAFLVGGLICAIGQGLQNFYIHFF     50
                     |:::|:||:||||.|||.||||.||:||||||||||.|||..||||:..|
BL00781___spo      1 MSSLKDNYQSKVKAYQPSPPYVLNCIKAFLVGGLICTIGQAFQNFYMAVF     50

BSNT_03485___     51 DFNEKTAGNPTAATLILISALLTGFGIYDRIGQFAGAGSAVPVTGFANSM    100
                     .|:||||||||.||||||||||||.|:|||||||||||||||||||||||
BL00781___spo     51 HFDEKTAGNPTVATLILISALLTGLGVYDRIGQFAGAGSAVPVTGFANSM    100

BSNT_03485___    101 ASAALEYKSEGLVLGVATNMFKLAGNVIVFGVVAAYIVGMIRFAFEKLMS    150
                     .|||||:||||.||||.||||||||||||||||||||||||||||:||. 
BL00781___spo    101 TSAALEHKSEGYVLGVGTNMFKLAGNVIVFGVVAAYIVGMIRFAFDKLF-    149


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.