Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04927 and BL00728

See DNA alignment / Visit BSNT_04927 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04927___yvqF.1.5803.seq
#    -bsequence pep-align/BL00728___liaF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04927___yvqF-BL00728___liaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04927___yvqF-BL00728___liaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04927___yvqF
# 2: BL00728___liaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     150/243 (61.7%)
# Similarity:   200/243 (82.3%)
# Gaps:           2/243 ( 0.8%)
# Score: 825.0
# 
#
#=======================================

BSNT_04927___      1 --MTKKQLLGLIIALFGISMFLQIIGIGDLLFWPLFFLIAGYFLKKYSRD     48
                       :||.||:||||.|||||:|||..|:||.|||||.||.|||||.||||.
BL00728___lia      1 MRLTKNQLIGLIIVLFGISIFLQNSGLGDALFWPLAFLFAGYFLHKYSRR     50

BSNT_04927___     49 WLGSVMYIFAAFLFLKNLFSITFNLFGYAFAAFLIYAGYRLIKGKPIFEP     98
                     ||||||||||.||.||::|||||:|||:.||||||||||||:..:|:|:.
BL00728___lia     51 WLGSVMYIFAGFLLLKDIFSITFSLFGFFFAAFLIYAGYRLVTNQPVFDR    100

BSNT_04927___     99 NEKQVNLNKKEHHDPPKDVKHPDMRSFFIGELQMMKQPFDLNDLNVSGFI    148
                     ::.:....:|....|.::...|..||||.|::::||.||||||||:||||
BL00728___lia    101 HKPKDRGKEKADFKPLQEKNSPGQRSFFFGDVKLMKTPFDLNDLNISGFI    150

BSNT_04927___    149 GDIKIDLSKAMIPEGESTIVISGVIGNVDIYVPSDLEVAVSSAVFIGDIN    198
                     ||:|||||||:|.|||:||||:|:||:||||:||||||::||:.|:|||:
BL00728___lia    151 GDVKIDLSKAIISEGENTIVITGLIGDVDIYIPSDLEVSISSSAFVGDID    200

BSNT_04927___    199 LIGSKKSGLSTKVYAASTDFSESKRRVKVSVSLFIGDVDVKYV    241
                     :||.:|||:..::|:.:.::.:|.||||:|:|||||||||:::
BL00728___lia    201 VIGGRKSGIGNQIYSETENYEQSARRVKISISLFIGDVDVRFI    243


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