Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04964 and BL00705

See DNA alignment / Visit BSNT_04964 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_04964___fhuC.1.5803.seq
#    -bsequence pep-align/BL00705___fhuC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04964___fhuC-BL00705___fhuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04964___fhuC-BL00705___fhuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04964___fhuC
# 2: BL00705___fhuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     203/271 (74.9%)
# Similarity:   240/271 (88.6%)
# Gaps:           3/271 ( 1.1%)
# Score: 1080.5
# 
#
#=======================================

BSNT_04964___      1 MNSLSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMS     50
                      .||||..||||||:::|||:||:.|||||:||:|||||||||||||||:
BL00705___fhu      1 -MSLSTNNLGIGYGEQMIVENLNLHIPKGKVTTMIGPNGCGKSTILKTMA     49

BSNT_04964___     51 RIMRSHAGAVYLNGKAIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSY    100
                     ||.||..|||||||||||:|||||:||.|||||||||||.||||:|||||
BL00705___fhu     50 RIQRSRTGAVYLNGKAIHQMSTKDVAKQMAILPQTPEAPGGLTVYELVSY     99

BSNT_04964___    101 GRFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPIEALSGGQRQRVWI    150
                     ||||||.|.|||:.:|||:::|:|:.|||..:.:||||||||||||||||
BL00705___fhu    100 GRFPHQKGMGRLSADDRRMVEWSLQVTGMLPFYDRPIEALSGGQRQRVWI    149

BSNT_04964___    151 AMALAQGTELLLLDEPTTYLDLAHQLEILQLLDRLNKEQGRTILMVIHDL    200
                     ||||||.|||||||||||||||||||||||||::||:|:|||||||||||
BL00705___fhu    150 AMALAQETELLLLDEPTTYLDLAHQLEILQLLEKLNQEEGRTILMVIHDL    199

BSNT_04964___    201 NHAARFSHYMIALKKGTVIKEGTALEVMTPDILKQVFQIDAEIVTDPRTN    250
                     ||||||:|:|:||.:|.::|||...||||.::||:||||||||:.||||.
BL00705___fhu    200 NHAARFAHHMVALNRGAIVKEGAPHEVMTSEVLKKVFQIDAEIILDPRTG    249

BSNT_04964___    251 KPVCLTYDLIKNEKE--LVTV    269
                     |||||||||:|.|::  |.|.
BL00705___fhu    250 KPVCLTYDLLKKEEDQRLATG    270


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