Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01010 and BL00700

See DNA alignment / Visit BSNT_01010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_01010___ydhR.1.5803.seq
#    -bsequence pep-align/BL00700___ydhR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01010___ydhR-BL00700___ydhR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01010___ydhR-BL00700___ydhR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01010___ydhR
# 2: BL00700___ydhR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     165/301 (54.8%)
# Similarity:   209/301 (69.4%)
# Gaps:          17/301 ( 5.6%)
# Score: 894.5
# 
#
#=======================================

BSNT_01010___      1 --MLGGIEAGGTKVICAVGKEDGTIIDRIEFPTKMPDETIEKVIQYFRQF     48
                       ..|.|||||||.:||||.|.|.||||:..||:.|:|||.|:..:|.::
BL00700___ydh      1 MKHYGAIEAGGTKFVCAVGTEKGEIIDRLTIPTETPEETIGKLTDFFSKY     50

BSNT_01010___     49 SLQAIGIGSFGPVDNDKTSQTYGTIMATPKAGWRHYPFLQTVKNEMKIPV     98
                     .|.::|:|||||:...|..:.||.|..|||..|:.|||:..::..:.|||
BL00700___ydh     51 QLTSMGVGSFGPISVAKNKEDYGYITNTPKLAWKGYPFIPELEKRLGIPV    100

BSNT_01010___     99 GFSTDVNAAALGEFLFGEAKGLDSCLYITIGTGIGAGAIVGGRLLQGLSH    148
                     .|:||||||||||...|||:||:||||||:||||||||||||||:|...|
BL00700___ydh    101 SFTTDVNAAALGELTKGEAQGLESCLYITVGTGIGAGAIVGGRLVQSTLH    150

BSNT_01010___    149 PEMGHIYIRRHPDDAYQGKCPYHGDCFEGLASGPAIEARWGKKAADLSGI    198
                     |||||:.|||||.|.::|.||||.||.||:|||||:|.|||||..||:..
BL00700___ydh    151 PEMGHLLIRRHPQDTFEGICPYHKDCLEGMASGPALEKRWGKKGKDLAEN    200

BSNT_01010___    199 AQVWELEGYYIAQALAQYILILAPKKIILGGGVMQQKQVFSYIYQYVPKI    248
                     .:|||||..|:||||.||||||.|:|||:|||||:|:|:|..|.:.:.:.
BL00700___ydh    201 EEVWELEADYLAQALMQYILILCPEKIIMGGGVMKQQQLFPLIRKKLAEY    250

BSNT_01010___    249 MNNYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQAEAASGEVR    298
                     :|.|:|.    .|:.:|||||.||.:.||.|.|.|||...          
BL00700___ydh    251 LNGYVDL----PDLEEYIVPPGLGDDQGITGALALAHSIG----------    286

BSNT_01010___    299 S    299
                      
BL00700___ydh    286 -    286


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