Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03284 and BL00674
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03284___ypbR.1.5803.seq
# -bsequence pep-align/BL00674___ypbR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03284___ypbR-BL00674___ypbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03284___ypbR-BL00674___ypbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03284___ypbR
# 2: BL00674___ypbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1205
# Identity: 587/1205 (48.7%)
# Similarity: 788/1205 (65.4%)
# Gaps: 30/1205 ( 2.5%)
# Score: 2896.5
#
#
#=======================================
BSNT_03284___ 1 MTDQNRK-ELLHKTGELYKQFIENQDEQRAAKLAAVMKKAADEEVYIAFT 49
|...|.| :|:.:.|.::.:..:|.|::|:|:||.:::|...:|||||.|
BL00674___ypb 1 MAQINTKDDLMKRAGAVFGELTKNGDDKRSAQLAGIIRKWLRKEVYIALT 50
BSNT_03284___ 50 GHYSAGKSSLLNCLLMENILPTSPIPTSANLVVIRNGEKRVRLHTTDGAC 99
||||||||||||.||.|.:|||||||||||||::|.||.:..|||.||..
BL00674___ypb 51 GHYSAGKSSLLNALLQEEVLPTSPIPTSANLVLVRRGEMKTTLHTVDGRY 100
BSNT_03284___ 100 AELEGAYQKDKVQQYCKDGEQIESVEIFDRYTEIDSGVAYIDTPGIDSTD 149
|:::|:|.|:|||.||:||.|||.|||...::.|......||||||||||
BL00674___ypb 101 AQMDGSYDKEKVQAYCRDGSQIEMVEIGGPFSGIAPQAVLIDTPGIDSTD 150
BSNT_03284___ 150 DAHFLSAASILHQADALFYVVHYNHVHSEENVKFLRSIKESIPNVYFIVN 199
|||||||:|||||||||||||||||||||||||||||||:.|||::||||
BL00674___ypb 151 DAHFLSASSILHQADALFYVVHYNHVHSEENVKFLRSIKDKIPNIFFIVN 200
BSNT_03284___ 200 QIDRHDETETKFGDYKAQVEEMLCNEGISKEALYFTSVTEPDHPFNQMGA 249
|||||||.||.|..||.||.:||..||||:|.|:|||||..|||.|:...
BL00674___ypb 201 QIDRHDEAETDFHAYKKQVLDMLLKEGISEEHLFFTSVTAADHPLNEFNR 250
BSNT_03284___ 250 LREELRRIEQQSKSNMQALTEQKVRNLLKEHTEMLKKDETGAPSFAEQLN 299
||.||.|::.||:..:||.||||:.:|:.||.:||..||..| .:|:..
BL00674___ypb 251 LRAELERLQHQSEQQLQAYTEQKISSLIHEHIKMLISDEDTA--LSEETA 298
BSNT_03284___ 300 IQTGLVQSLRDQFNEAEKQTTEAEKRMQEEINLILKNANLTPFEMRELAA 349
.....|::|:.|..:..:|...||::::::|..|.:|||:|||||||||.
BL00674___ypb 299 SLRETVETLKSQLADLTEQEKRAEEQIKKDIQTIAQNANITPFEMRELAK 348
BSNT_03284___ 350 AFLESQEPSFKTGFFFSKAKTAQERDKRRNAFFSDVAKRTEAEADWHMID 399
::|||.|..||.|..||||||.:|:.||:.||.:||.||.:||.|||:|:
BL00674___ypb 349 SYLESIEKGFKKGILFSKAKTLEEKQKRKEAFLADVQKRVQAEIDWHVIE 398
BSNT_03284___ 400 TLHKLAKAFDVYTAESEKLIQAYRTPLDISIIERAVKHGAAFSSEYVLQY 449
.:....|.|:|...|..:.:..:||.:|.:.:.|:.|.||..:.||||.|
BL00674___ypb 399 AIKAFMKCFNVQNDEMLREVLQFRTVIDENDLLRSRKKGAELTPEYVLNY 448
BSNT_03284___ 450 TKDLAELIRKEAKREAADIIKVLSAMVKERVSKDVQTINDRLVQESEKLV 499
||:|||.||::|||:|..:|..|...:|||.....:.|......|..||.
BL00674___ypb 449 TKELAENIRRKAKRQAQPLIDQLKTFIKERSVLQAEAIKAEYDAEQAKLA 498
BSNT_03284___ 500 FLQEQARLENNAREKTDRLWAIWE--EESACPMHIDTEWF--------KS 539
..:.:...:..:.||.:|||..|| .:|..| ..|: |:
BL00674___ypb 499 ERERRLIEQQKSYEKANRLWDQWEHGNQSDLP----ANWYAAERKPLEKT 544
BSNT_03284___ 540 KKTRVAAPEQKQGRSQLTAQPMPKSEIKMEQEMPLQDQIKRFYTLSDLLG 589
...:.|.|.:.||.:. .:.:..:..:..:.:.|:.|:.|:.:|.
BL00674___ypb 545 LDAKRAEPVRAQGENS------SRKDEALHPKKGVSESIEHFFELARILA 588
BSNT_03284___ 590 ECSMLLKQTSAFRERVKRLEERKFTLALFGGFSSGKSSFANALVGERVLP 639
:...|.||..||..:.:||..|:|||||||.||||||||||||.|.:|||
BL00674___ypb 589 DIPALEKQRKAFLHKTERLHTRQFTLALFGAFSSGKSSFANALCGRKVLP 638
BSNT_03284___ 640 SSPTPTTATINKITMPINGNLNKTADVVFKTEDDITAEILQ-LTGIPKEP 688
||||||||||||||.|.....:.||:|.||||.:||||:.| |.|.....
BL00674___ypb 639 SSPTPTTATINKITKPSGTKRDGTAEVAFKTEGEITAELDQLLDGKMASA 688
BSNT_03284___ 689 AGRSFTEKWEKAVKKNRLQEEHVKLISNFLLAYEKYQQYIQEQKKLTIPL 738
.|.:|.||.:..:||..|.::...||.|||.||::|..||.:|:.|||..
BL00674___ypb 689 KGSAFGEKLKNLLKKEELHDDERLLIKNFLKAYKRYGSYINDQEILTISA 738
BSNT_03284___ 739 SELKPYVAEETTACVVKEVTVYYTCPLTEKGITIVDTPGASSMNKRHTEL 788
.:|.||||||.|||.|:|||||.:.|:|||||||||||||||||||||||
BL00674___ypb 739 DDLHPYVAEEQTACAVREVTVYLSTPVTEKGITIVDTPGASSMNKRHTEL 788
BSNT_03284___ 789 AFQYIKDADAFFYMTYYQHSFSKGDRSFLRKLGLVKESLSMDKMFFIINA 838
||||:|||||..|:|||||||||.||||||:|||:|::.||||||||:||
BL00674___ypb 789 AFQYMKDADALLYLTYYQHSFSKADRSFLRRLGLIKDAFSMDKMFFILNA 838
BSNT_03284___ 839 ADLAKDKTELETVTDYVSAELVKEGVYEPQLFTVSSKEELVGKPESFYNQ 888
|||||...||:||.|||..||:|||:..|.|:.||||:|| .|..|.||.
BL00674___ypb 839 ADLAKSPVELQTVEDYVRGELLKEGIQNPHLYHVSSKQEL-NKKTSPYND 887
BSNT_03284___ 889 FSKVRKHLDRFIEVDVKKASAAQLSSEADKLCETVFQLHQSQHQSREEKE 938
||::::.||.|||..:.:.:..:|..|..|||||||||..|.|:|.||||
BL00674___ypb 888 FSRLKRELDDFIENGLARTAVEELLDEGKKLCETVFQLRGSLHRSAEEKE 937
BSNT_03284___ 939 AQKQRLMLSFERTAADIEKRRNSKTIIEKVKKDTREQLYHIAQRLSYFAN 988
|:::|:..:::...|.||:.....:|::..:||..||.||:.|||::||:
BL00674___ypb 938 AEQKRVAKAYQEALAAIEEAEKGSSILQMTEKDVEEQFYHMKQRLAFFAH 987
BSNT_03284___ 989 DLLKSAFHPGLQNGDWKKNVSKAMTTALHEYQFEYIQEIKTLDVRMSGFI 1038
||.|:|.|||||||||:.|:..|:.:.|.||:||::||:|.||:||...:
BL00674___ypb 988 DLFKAAIHPGLQNGDWRANLQTALKSCLKEYEFEFLQELKALDIRMENLM 1037
BSNT_03284___ 1039 ERHINEEWLDQFQKTLNEDGYFSVYAGDQHSNGIQLKEVEPEIEERAFEQ 1088
.:...|:|.:..::.|..:.||||:...........:..|...:|..|..
BL00674___ypb 1038 LKFAGEQWANAVKERLAGNPYFSVHIQADRPETESWETTEASADEGEFTD 1087
BSNT_03284___ 1089 ELKEVKSPKQFFEQKGKAAFIEAVRMKLTKITEAWIKNEEESLISHYTAH 1138
|||..|:||.||:|.|||..:||...||:.||:.||:.|:::.::.....
BL00674___ypb 1088 ELKMFKTPKTFFQQNGKARLVEAFTAKLSAITDNWIQREKQTFLNRCKTS 1137
BSNT_03284___ 1139 LRRLQEDMGEKAIAQITDQKETYLRGYAEGEHAKEIEMAYQACISWKNSD 1188
..:||:.....|.||:.:|||.|.....|....:.||.|:.....|..|.
BL00674___ypb 1138 AGQLQKAAVLSAKAQLEEQKEAYFHEALESAERENIEKAHALAGEWLRSC 1187
BSNT_03284___ 1189 NTIKM 1193
BL00674___ypb 1187 ----- 1187
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