Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03446 and BL00661

See DNA alignment / Visit BSNT_03446 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_03446___resA.1.5803.seq
#    -bsequence pep-align/BL00661___resA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03446___resA-BL00661___resA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03446___resA-BL00661___resA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03446___resA
# 2: BL00661___resA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     130/179 (72.6%)
# Similarity:   153/179 (85.5%)
# Gaps:           2/179 ( 1.1%)
# Score: 708.0
# 
#
#=======================================

BSNT_03446___      1 MKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDT     50
                      .||:|.:|||||||||:.|||||:|:|||...||::.|..||.|.|||.
BL00661___res      1 -MKKKRFYIRTGILLVLLAALGYTLYSAVFQNTESVAVGEKAPIFSLEDV     49

BSNT_03446___     51 NGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVA    100
                     :|.|::|.:|||||||||||||||||||:||||||||||.||.:||||||
BL00661___res     50 DGNRLKLDELKGKGVFLNFWGTWCEPCKREFPYMANQYKVFKDKGVEIVA     99

BSNT_03446___    101 VNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEG    150
                     ||||||.:||.||||.:|||||||||.|||||:||||:||||||||||:|
BL00661___res    100 VNVGESNLAVRNFMKDHGVNFPVVLDKDRQVLNAYDVTPLPTTFLINPDG    149

BSNT_03446___    151 KVVKVVTGTMTESMIHEYMNLIKPGETSG    179
                     ::||||||.|||.|||:|||:|||..:| 
BL00661___res    150 EIVKVVTGEMTERMIHDYMNMIKPEGSS-    177


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