Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03446 and BL00661
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence pep-align/BSNT_03446___resA.1.5803.seq
# -bsequence pep-align/BL00661___resA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03446___resA-BL00661___resA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03446___resA-BL00661___resA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03446___resA
# 2: BL00661___resA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 130/179 (72.6%)
# Similarity: 153/179 (85.5%)
# Gaps: 2/179 ( 1.1%)
# Score: 708.0
#
#
#=======================================
BSNT_03446___ 1 MKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDT 50
.||:|.:|||||||||:.|||||:|:|||...||::.|..||.|.|||.
BL00661___res 1 -MKKKRFYIRTGILLVLLAALGYTLYSAVFQNTESVAVGEKAPIFSLEDV 49
BSNT_03446___ 51 NGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVA 100
:|.|::|.:|||||||||||||||||||:||||||||||.||.:||||||
BL00661___res 50 DGNRLKLDELKGKGVFLNFWGTWCEPCKREFPYMANQYKVFKDKGVEIVA 99
BSNT_03446___ 101 VNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEG 150
||||||.:||.||||.:|||||||||.|||||:||||:||||||||||:|
BL00661___res 100 VNVGESNLAVRNFMKDHGVNFPVVLDKDRQVLNAYDVTPLPTTFLINPDG 149
BSNT_03446___ 151 KVVKVVTGTMTESMIHEYMNLIKPGETSG 179
::||||||.|||.|||:|||:|||..:|
BL00661___res 150 EIVKVVTGEMTERMIHDYMNMIKPEGSS- 177
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