Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03444 and BL00660

See DNA alignment / Visit BSNT_03444 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_03444___resB.1.5803.seq
#    -bsequence pep-align/BL00660___resB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03444___resB-BL00660___resB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03444___resB-BL00660___resB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03444___resB
# 2: BL00660___resB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 542
# Identity:     395/542 (72.9%)
# Similarity:   464/542 (85.6%)
# Gaps:           0/542 ( 0.0%)
# Score: 2185.0
# 
#
#=======================================

BSNT_03444___      1 MKQVKCECGHINPVGTVLCESCGRALQETQPPLADMRYDGSARRSQTYNK     50
                     ||::||||||:||.|||||||||:.|.:....|.||||||||||||||||
BL00660___res      1 MKEIKCECGHVNPAGTVLCESCGKPLVKQDAKLLDMRYDGSARRSQTYNK     50

BSNT_03444___     51 TIIDKIWNFFSSVKVGIWLIVITLAASAFGTIFPQEAYLPPGAQADTYYK    100
                     ||:|||||||||||||:|||||||.|||||||||||.:|||||||||||.
BL00660___res     51 TIVDKIWNFFSSVKVGVWLIVITLTASAFGTIFPQEMFLPPGAQADTYYS    100

BSNT_03444___    101 EQYGTFGQLYYLLGFHHLYGSWWYLLLIASIGISLVICSLDRVIPLYRAL    150
                     ||||..||:||.||||:||||||:::|:|||||||||||||||:||||||
BL00660___res    101 EQYGLLGQIYYALGFHNLYGSWWFIILVASIGISLVICSLDRVVPLYRAL    150

BSNT_03444___    151 KNQGVRRSPAFLRRQRLFSETVTVLNGESKEKIVALLKKKHYRIREKEGS    200
                     |||||.|:|.|:.||||||.|...::.::|.:|:..||||.||::|:.|:
BL00660___res    151 KNQGVTRNPNFMERQRLFSRTEADMSEDTKSQIIGKLKKKRYRVKEENGN    200

BSNT_03444___    201 ILAEKGRFSRWGPYVNHIGLIIFLIGAMLRFVPGMYVDETLWVREGETAA    250
                     :.||||||||||||||||||||||||.|||||||||||||||:|||||..
BL00660___res    201 LFAEKGRFSRWGPYVNHIGLIIFLIGVMLRFVPGMYVDETLWIREGETVP    250

BSNT_03444___    251 IPGTDGKYYLKNNQFSVETYNSKTEKKVFADAIDRVGDGRVAKNFQTDAV    300
                     ||||||.||||||:|..|.|:|:.||:||::||.:.|||.|||.:|||..
BL00660___res    251 IPGTDGHYYLKNNRFIKEMYDSEKEKEVFSEAITKAGDGTVAKTYQTDVE    300

BSNT_03444___    301 LYKREGKIVYGEKPKLKKVTEEDIRVNQPLRFDSFSVYQVDYKENQLDQM    350
                     ||:|:...:.||.|:||||....|:||.||:|.|:::||:.|||.:||:|
BL00660___res    301 LYERKNDSLPGEAPELKKVKNGKIKVNDPLKFGSYALYQLTYKEGELDKM    350

BSNT_03444___    351 VFQLIDKKTKKSFGSLKINLLDPDSVYDLGNGYKVEIASYLPDFYFNQDG    400
                     |||||:|.:.||||.:.|:||:|...|||||||||.|||||||||||:||
BL00660___res    351 VFQLIEKDSGKSFGKVAIDLLEPKPEYDLGNGYKVHIASYLPDFYFNKDG    400

BSNT_03444___    401 EPSTKTKIPNNPAFVFNIITPDKPKGEKSFVAIQETIEGSDNNKYKLKFD    450
                     ||||||:.||||||||.|..|||||||||||||||||||||:||||:|||
BL00660___res    401 EPSTKTRNPNNPAFVFQITAPDKPKGEKSFVAIQETIEGSDDNKYKMKFD    450

BSNT_03444___    451 HVETKNITGLTVRKDLTLWVLAVGGAIFMIGVIQGMYWQHRRIWLHSQDG    500
                     ||||||::|||:|||||||||.||||||||||||||||.||||||.:.||
BL00660___res    451 HVETKNLSGLTIRKDLTLWVLMVGGAIFMIGVIQGMYWHHRRIWLRTLDG    500

BSNT_03444___    501 AVMVAGHTNKNWFGLKKDLAFILADSGLTEPVDQKELIKTQK    542
                     .|:|||||||||:|||:||...|||:|::||.|||||.|.:|
BL00660___res    501 HVLVAGHTNKNWYGLKQDLKAALADTGISEPADQKELSKEKK    542


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03444 and BL00660

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
