Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04103 and BL00616

See DNA alignment / Visit BSNT_04103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_04103___ysoA.1.5803.seq
#    -bsequence pep-align/BL00616___ysoA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04103___ysoA-BL00616___ysoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04103___ysoA-BL00616___ysoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04103___ysoA
# 2: BL00616___ysoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     238/337 (70.6%)
# Similarity:   284/337 (84.3%)
# Gaps:           5/337 ( 1.5%)
# Score: 1263.0
# 
#
#=======================================

BSNT_04103___      1 MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKYDDTE     50
                     |.|||||:||||||::|:|||.|||.:||||.|.|||.|||||.:|:|.|
BL00616___yso      1 MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEE     50

BSNT_04103___     51 SDLHLGMAICFLELGELEEAKSVCEKMLKEGYGHYFTVLQVYMTILIQLK    100
                     ||::||||||.||:|||||||.:||||||||:|||||||||||||||||:
BL00616___yso     51 SDIYLGMAICLLEIGELEEAKGICEKMLKEGHGHYFTVLQVYMTILIQLR    100

BSNT_04103___    101 KYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMT-DPDREDEAWAEE    149
                     :||:||.|||||||||:||.||||||||||||||||| ||..||  ..|:
BL00616___yso    101 QYEKVKETIEAVLEENKLPPESAEQFYKLLDFSRKMTEDPGPED--ITED    148

BSNT_04103___    150 YEDT--IDTEKVLASPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSAHPI    197
                     ..:|  :|.|::|...|||:.|:|.|||||:..|.||||||||:|||||:
BL00616___yso    149 LPETEEVDQERLLNDTEEQVKLLHGLKDRNLTSYIGLLKTILQNPSAHPV    198

BSNT_04103___    198 IKTMIVMLLTEHEYSKPVHISKFGESLTIEPSEIVPPDAAPILHRVLRVL    247
                     :||||:.||.|.::.||..::|||:|:||.|:|.|.||..|||..||.||
BL00616___yso    199 VKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPILKHVLSVL    248

BSNT_04103___    248 DETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVGYEM    297
                     |:||||||||||.|||||||||:|||||||||..:.:|||||||||||||
BL00616___yso    249 DDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEM    298

BSNT_04103___    298 HGIEIESEELHMMYEFTDRELDEACTMLKDIEEISYL    334
                     |||:|:.||||::|||.||:|||||.::|||||||||
BL00616___yso    299 HGIDIDKEELHILYEFNDRQLDEACALIKDIEEISYL    335


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