Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04106 and BL00615
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence pep-align/BSNT_04106___leuD.1.5803.seq
# -bsequence pep-align/BL00615___leuD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04106___leuD-BL00615___leuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04106___leuD-BL00615___leuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: BL00615___leuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 171/199 (85.9%)
# Similarity: 183/199 (92.0%)
# Gaps: 0/199 ( 0.0%)
# Score: 925.0
#
#
#=======================================
BSNT_04106___ 1 MEPLKSHTGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYDA 50
|||||:|.|.||||||||||||||||||||||||||||||||||||||..
BL00615___leu 1 MEPLKTHNGIAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYLD 50
BSNT_04106___ 51 NGEPNPEFELNQPVYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIA 100
||:|||:||||:|.|:||||||||||||||||||||||||||||||||||
BL00615___leu 51 NGDPNPDFELNRPEYKGASILIAGENFGCGSSREHAPWALDDYGFKIIIA 100
BSNT_04106___ 101 PSFADIFHQNCFKNGMLPIRMPYDNWKQLVGQYENQSLQMTVDLEKQLIH 150
||||||||||||||||||||:||:.||:|..|||.|||.||||||||.|.
BL00615___leu 101 PSFADIFHQNCFKNGMLPIRLPYEAWKELAEQYEYQSLTMTVDLEKQTIT 150
BSNT_04106___ 151 DSEGNQISFEVDPHWKEMLINGYDEISLTLLLEDEIKQFESQRSSWLQA 199
|..|.||:|||||||||||:|||||||||||||:||:|||.||||||||
BL00615___leu 151 DHAGRQIAFEVDPHWKEMLLNGYDEISLTLLLEEEIEQFEKQRSSWLQA 199
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