Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03150 and BL00577
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence pep-align/BSNT_03150___yocR.1.5803.seq
# -bsequence pep-align/BL00577___yocR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03150___yocR-BL00577___yocR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03150___yocR-BL00577___yocR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03150___yocR
# 2: BL00577___yocR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 331/446 (74.2%)
# Similarity: 394/446 (88.3%)
# Gaps: 1/446 ( 0.2%)
# Score: 1750.0
#
#
#=======================================
BSNT_03150___ 1 -MKEANQWSSKLGFILAAAGSAIGLGAIWKFPYVAGTSGGGAFLLIFILF 49
..:.|.||||||||||:|||||||||||||||||||||||||||:||||
BL00577___yoc 1 MENKQNIWSSKLGFILASAGSAIGLGAIWKFPYVAGTSGGGAFLLMFILF 50
BSNT_03150___ 50 TVLIGLPLLLGEFIIGRRTQKDAVQSYKTLAPGTKWHWIGYLGMVTCFIL 99
|:|||||||:.||||||:||||||:|||.||||:.|||:|.||::|||||
BL00577___yoc 51 TLLIGLPLLMAEFIIGRKTQKDAVESYKELAPGSLWHWVGRLGIITCFIL 100
BSNT_03150___ 100 LSFYSVVGGWILIYIIKGFTGGLSQTSGFDTIFASTISNPYLAVGGQLLF 149
|||||||||||:|||:||.||.||:::.:..:|..||:||||.:|.|..|
BL00577___yoc 101 LSFYSVVGGWIIIYIVKGLTGELSRSTDYAGLFGETIANPYLVLGSQFAF 150
BSNT_03150___ 150 MVVTILVVAKGVSSGIEKASQVLMPALFLLFIILMVRSVTLDGAMEGIKF 199
:::|||||||||.|||||||:.:|||||::|::|:|||:||.|:|||::|
BL00577___yoc 151 IIITILVVAKGVRSGIEKASKFMMPALFIIFLLLIVRSLTLPGSMEGLEF 200
BSNT_03150___ 200 FLMPDLTAIDANTILYAMGQSFFLLSVGVSVMVTYSAYLEKQENLVQSAV 249
||.|||:.|.|.|:|:|:|||||.||||||||||||:||.|:||||||||
BL00577___yoc 201 FLKPDLSHIKAETVLFALGQSFFSLSVGVSVMVTYSSYLSKKENLVQSAV 250
BSNT_03150___ 250 SVTVMNMLVAVMAGIAIFPAVFSFGLKPDQGPVLLFNVLPTVFNQMPFGI 299
|||::|:.||::||.|||||||||||.||.||:|||||||:||::||.||
BL00577___yoc 251 SVTLLNVSVAILAGFAIFPAVFSFGLSPDAGPMLLFNVLPSVFHKMPLGI 300
BSNT_03150___ 300 IFLLAFLLLFLFAALTSAFSMLEILVAVLSKGDVNKRKRFAWLGGIAIFI 349
|||||||||||||.||||||||||||:.|||||..||:.|||.||||||:
BL00577___yoc 301 IFLLAFLLLFLFATLTSAFSMLEILVSSLSKGDPKKRQAFAWAGGIAIFL 350
BSNT_03150___ 350 VGVPSALSYGVLSDVSIFHLSIFDAADYLVSNILMPLGALLISIFVPLKI 399
.|:|||||||||.|||||:|||||||||||||||||||||||::||||||
BL00577___yoc 351 FGIPSALSYGVLQDVSIFNLSIFDAADYLVSNILMPLGALLIAVFVPLKI 400
BSNT_03150___ 400 PKQDLFDELKSGSNLKRKWFAVWLLLIRYLSPVAIIIVFLHVVGIF 445
||.:||.|||.||.:.|||||.|||||||.:|:.||:|||..:|:|
BL00577___yoc 401 PKDELFAELKEGSKISRKWFAAWLLLIRYAAPIVIIVVFLDAIGVF 446
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