Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03593 and BL00562

See DNA alignment / Visit BSNT_03593 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_03593___prpD.1.5803.seq
#    -bsequence pep-align/BL00562___prpD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03593___prpD-BL00562___prpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03593___prpD-BL00562___prpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03593___prpD
# 2: BL00562___prpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity:     321/479 (67.0%)
# Similarity:   386/479 (80.6%)
# Gaps:           7/479 ( 1.5%)
# Score: 1728.0
# 
#
#=======================================

BSNT_03593___      1 -------MPKTDRVIEEITDYVLEKEITSAEAYTTAGHVLLDTLGCGILA     43
                            :...|:::|||.||.:..:|:|.||..||.:||:|||||||||
BL00562___prp      1 MKTESQTLQNCDQLLEEIADYTVNAKISSEEAIETARYVLMDTLGCGILA     50

BSNT_03593___     44 LRYPECTKLLGPIVPGTTVPNGSKVPGTSYVLDPVRAAFNIGCMIRWLDY     93
                     |:||||.|.||||.|||.||||::||||.:.||||..|||||||||||||
BL00562___prp     51 LKYPECAKHLGPIAPGTVVPNGTRVPGTQFELDPVHGAFNIGCMIRWLDY    100

BSNT_03593___     94 NDTWLAAEWGHPSDNLGGILAAADYVSRVRLSEGKEPLTVSDVLEMMIKA    143
                     |||||||||||||||||.|||.||||||..|:.||||||::|||..::||
BL00562___prp    101 NDTWLAAEWGHPSDNLGAILACADYVSRQLLAAGKEPLTINDVLTAIVKA    150

BSNT_03593___    144 HEIQGVLALENSLNRVGLDHVLFVKVATTAVAAKLLGGGREEIKNALSNA    193
                     |||||||||:|||||.|||||||||||:||||..||||.::::.||:|.|
BL00562___prp    151 HEIQGVLALDNSLNRNGLDHVLFVKVASTAVACSLLGGTKQDVINAVSQA    200

BSNT_03593___    194 WIDNAALRTYRHSPNTGSRKSWAAGDATSRGVHLALMSLKGEMGYPTALS    243
                     |:||::||||||:|||||||||||||||||||.||:|:|||||||.||||
BL00562___prp    201 WVDNSSLRTYRHAPNTGSRKSWAAGDATSRGVRLAMMTLKGEMGYKTALS    250

BSNT_03593___    244 APGWGFQDVLFNKKEIKLACPLDAYVMENVLFKVSYPAEFHAQTAAECAV    293
                     ||.||||||||..||:.||.|||:||:||||||:|||||||||||||.|:
BL00562___prp    251 APMWGFQDVLFGGKELTLARPLDSYVIENVLFKISYPAEFHAQTAAEAAI    300

BSNT_03593___    294 ILHPQVKNRIDEIDRVVIRTHESAIRIIDKKGPLHNPADRDHCLQYITAI    343
                     .|||:||:|:|:|.::||.|||||||||||.|.|||||||||||||||||
BL00562___prp    301 RLHPEVKDRLDDIGQIVITTHESAIRIIDKTGELHNPADRDHCLQYITAI    350

BSNT_03593___    344 GLLFGDITAQHYEAETASDPRIDKLRDKMEVTENKTYTEDYLKPDKRSIS    393
                     ||::|||||.|||.|||.:|.||:||:||...|||.|:.|||.|:||||:
BL00562___prp    351 GLIYGDITADHYEDETAQNPEIDRLREKMTTVENKQYSVDYLDPEKRSIA    400

BSNT_03593___    394 NAVQVHFKDGTSTEMVECEFPLGHRFRREEAVPKLLEKFSDNLKTHYPDK    443
                     |||||.:||||.:|.:..|:|:|||.||.|.:|.|.:||.:||||.:|..
BL00562___prp    401 NAVQVFYKDGTHSEKIAVEYPIGHRRRRNEGIPLLKDKFINNLKTRFPAG    450

BSNT_03593___    444 QHKHIYERCTSYETLQTMRVNEFVDMFCM    472
                     |.:.|.........|....|.:|:::|.:
BL00562___prp    451 QAERINALLNDPHRLSGAPVPDFMELFVI    479


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