Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03593 and BL00562
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence pep-align/BSNT_03593___prpD.1.5803.seq
# -bsequence pep-align/BL00562___prpD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03593___prpD-BL00562___prpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03593___prpD-BL00562___prpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03593___prpD
# 2: BL00562___prpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 321/479 (67.0%)
# Similarity: 386/479 (80.6%)
# Gaps: 7/479 ( 1.5%)
# Score: 1728.0
#
#
#=======================================
BSNT_03593___ 1 -------MPKTDRVIEEITDYVLEKEITSAEAYTTAGHVLLDTLGCGILA 43
:...|:::|||.||.:..:|:|.||..||.:||:|||||||||
BL00562___prp 1 MKTESQTLQNCDQLLEEIADYTVNAKISSEEAIETARYVLMDTLGCGILA 50
BSNT_03593___ 44 LRYPECTKLLGPIVPGTTVPNGSKVPGTSYVLDPVRAAFNIGCMIRWLDY 93
|:||||.|.||||.|||.||||::||||.:.||||..|||||||||||||
BL00562___prp 51 LKYPECAKHLGPIAPGTVVPNGTRVPGTQFELDPVHGAFNIGCMIRWLDY 100
BSNT_03593___ 94 NDTWLAAEWGHPSDNLGGILAAADYVSRVRLSEGKEPLTVSDVLEMMIKA 143
|||||||||||||||||.|||.||||||..|:.||||||::|||..::||
BL00562___prp 101 NDTWLAAEWGHPSDNLGAILACADYVSRQLLAAGKEPLTINDVLTAIVKA 150
BSNT_03593___ 144 HEIQGVLALENSLNRVGLDHVLFVKVATTAVAAKLLGGGREEIKNALSNA 193
|||||||||:|||||.|||||||||||:||||..||||.::::.||:|.|
BL00562___prp 151 HEIQGVLALDNSLNRNGLDHVLFVKVASTAVACSLLGGTKQDVINAVSQA 200
BSNT_03593___ 194 WIDNAALRTYRHSPNTGSRKSWAAGDATSRGVHLALMSLKGEMGYPTALS 243
|:||::||||||:|||||||||||||||||||.||:|:|||||||.||||
BL00562___prp 201 WVDNSSLRTYRHAPNTGSRKSWAAGDATSRGVRLAMMTLKGEMGYKTALS 250
BSNT_03593___ 244 APGWGFQDVLFNKKEIKLACPLDAYVMENVLFKVSYPAEFHAQTAAECAV 293
||.||||||||..||:.||.|||:||:||||||:|||||||||||||.|:
BL00562___prp 251 APMWGFQDVLFGGKELTLARPLDSYVIENVLFKISYPAEFHAQTAAEAAI 300
BSNT_03593___ 294 ILHPQVKNRIDEIDRVVIRTHESAIRIIDKKGPLHNPADRDHCLQYITAI 343
.|||:||:|:|:|.::||.|||||||||||.|.|||||||||||||||||
BL00562___prp 301 RLHPEVKDRLDDIGQIVITTHESAIRIIDKTGELHNPADRDHCLQYITAI 350
BSNT_03593___ 344 GLLFGDITAQHYEAETASDPRIDKLRDKMEVTENKTYTEDYLKPDKRSIS 393
||::|||||.|||.|||.:|.||:||:||...|||.|:.|||.|:||||:
BL00562___prp 351 GLIYGDITADHYEDETAQNPEIDRLREKMTTVENKQYSVDYLDPEKRSIA 400
BSNT_03593___ 394 NAVQVHFKDGTSTEMVECEFPLGHRFRREEAVPKLLEKFSDNLKTHYPDK 443
|||||.:||||.:|.:..|:|:|||.||.|.:|.|.:||.:||||.:|..
BL00562___prp 401 NAVQVFYKDGTHSEKIAVEYPIGHRRRRNEGIPLLKDKFINNLKTRFPAG 450
BSNT_03593___ 444 QHKHIYERCTSYETLQTMRVNEFVDMFCM 472
|.:.|.........|....|.:|:::|.:
BL00562___prp 451 QAERINALLNDPHRLSGAPVPDFMELFVI 479
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