Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00063 and BL00541
See
DNA alignment /
Visit
BSNT_00063 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence pep-align/BSNT_00063___holB.1.5803.seq
# -bsequence pep-align/BL00541___holB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00063___holB-BL00541___holB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00063___holB-BL00541___holB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: BL00541___holB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 276/329 (83.9%)
# Similarity: 310/329 (94.2%)
# Gaps: 0/329 ( 0.0%)
# Score: 1458.0
#
#
#=======================================
BSNT_00063___ 1 MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLA 50
||.:|.||.:|||||||||.||||::||:|||||||:|||||||||.|||
BL00541___hol 1 MATTWTEMQKLQPRVMKLLQNSIERNRLAHAYLFEGRKGTGKLDAATLLA 50
BSNT_00063___ 51 KSFFCLEDGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQE 100
|||||||||||||||||||:|||||||||:|:|.||||||||.|||||||
BL00541___hol 51 KSFFCLEDGAEPCESCRNCQRIESGNHPDVHVVHPDGLSIKKGQIQALQE 100
BSNT_00063___ 101 EFSKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQP 150
|||||||||||||||||||||||.|||||||||||||:.||:|||:||||
BL00541___hol 101 EFSKTGLESHKKLYIISHADQMTVNAANSLLKFLEEPSSDTIAVLLTEQP 150
BSNT_00063___ 151 QRLLDTIISRCQTLPFQPLQPKAIEDRLIEQDVSPHMARLLANMTNNVAE 200
|:||||||||||.|.||.|||::||..|::|:|||::|.||:|||||::|
BL00541___hol 151 QKLLDTIISRCQVLSFQSLQPESIEKELVKQEVSPNIAALLSNMTNNLSE 200
BSNT_00063___ 201 AVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWMPFFKEKTHQE 250
|:||||||:||||||||||||||||||||||||:||||||||||||.|||
BL00541___hol 201 ALELSRNDQFAESRAKVIKLYEVLHQRKGHAFFYIQDQWMPFFKEKDHQE 250
BSNT_00063___ 251 MGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQIL 300
|||||||.|||||||||:|:|||:::||||||:||||||:|||.||||||
BL00541___hol 251 MGLDMLLFIYRDVLSIQLGHEDKILFQDLFQSLKQHALQTTQQRVTNQIL 300
BSNT_00063___ 301 AVLEAKKRLHSNVNVQGLMEHLVLMLQEG 329
|||||||||:||||.||||||||||||||
BL00541___hol 301 AVLEAKKRLYSNVNAQGLMEHLVLMLQEG 329
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.