Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04239 and BL00476

See DNA alignment / Visit BSNT_04239 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence pep-align/BSNT_04239___ytcD.1.5803.seq
#    -bsequence pep-align/BL00476___ytcD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04239___ytcD-BL00476___ytcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04239___ytcD-BL00476___ytcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04239___ytcD
# 2: BL00476___ytcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:     102/126 (81.0%)
# Similarity:   113/126 (89.7%)
# Gaps:           1/126 ( 0.8%)
# Score: 540.0
# 
#
#=======================================

BSNT_04239___      1 MEKKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSELKRLMPNITQKM     50
                     |:.|||||||||||||||||||||||||||||||||||||||||||||||
BL00476___ytc      1 MKPKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSELKRLMPNITQKM     50

BSNT_04239___     51 LTQQLRELEADSVINRIVYNQVPPKVEYELSEYGRSLEGILDMLCAWGAN    100
                     |||||||||.|.|||||||.||||||||||||||.:|:.|||.||:||..
BL00476___ytc     51 LTQQLRELEEDGVINRIVYQQVPPKVEYELSEYGWTLKDILDSLCSWGEK    100

BSNT_04239___    101 HINRVYGDTFSVLEESVLNDKLKQES    126
                     ||.:||||.|:|||:||||::|::. 
BL00476___ytc    101 HITKVYGDKFAVLEDSVLNEQLQET-    125


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