Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01389 and BL00412
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_01389___padR.1.5803.seq
# -bsequence pep-align/BL00412___padR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01389___padR-BL00412___padR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01389___padR-BL00412___padR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: BL00412___padR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 123/185 (66.5%)
# Similarity: 143/185 (77.3%)
# Gaps: 3/185 ( 1.6%)
# Score: 631.0
#
#
#=======================================
BSNT_01389___ 1 MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTD 50
||||||||||||..|.|||||:||.||.||||||||||||||||||||||
BL00412___pad 1 MRVLKYAILGLLDHGSLSGYDMTSRFKAELGQFWSAKHSQIYPELKKLTD 50
BSNT_01389___ 51 EGFITFRTTIQGTKLEKKMYTLTDNGKQELHAWLIRHQPIPETVKDEFML 100
||||.|.|.|||:|||||||::|:.||:|||.||...:|:|:||||||||
BL00412___pad 51 EGFIEFETVIQGSKLEKKMYSITEAGKRELHGWLTEFKPVPDTVKDEFML 100
BSNT_01389___ 101 KAYFISSLSRQEASDLFTDQLQKRKAKLSDLQESYEKLMASA-KPMSFSS 149
|||||||:...||..||.||||||:.|.:.|....::|...| ..::|.|
BL00412___pad 101 KAYFISSMEPDEAKRLFNDQLQKRQEKAAFLNTKLDELKREAGDSITFRS 150
BSNT_01389___ 150 PDFGHYLVLTKALEREKNYVSWLESILAMIDKD-- 182
|.||||||||:||||||.|.||||..|.:::.|
BL00412___pad 151 PHFGHYLVLTRALEREKGYCSWLEKALLLMEDDKA 185
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