Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04248 and BL00395

See DNA alignment / Visit BSNT_04248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_04248___phoR.1.5803.seq
#    -bsequence pep-align/BL00395___phoR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04248___phoR-BL00395___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-BL00395___phoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: BL00395___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 588
# Identity:     343/588 (58.3%)
# Similarity:   426/588 (72.4%)
# Gaps:          16/588 ( 2.7%)
# Score: 1663.5
# 
#
#=======================================

BSNT_04248___      1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL     50
                     |.|:|.||.:..:..:||||..||..|..||.:|...|...||||||..:
BL00395___pho      1 MIKFRTRLLAALLTLLILVFASLGFLLVHLFHSSYDAKLSSHIEKEAALV     50

BSNT_04248___     51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ    100
                     |||.:..|:.:.....|::.|...||...|:|||.|:||:...|| |:.|
BL00395___pho     51 ASLANGENMKSSEQGAILEKASRELDSRVSLIDTKGQVLFHFGGR-AEEQ     99

BSNT_04248___    101 KV--QALVSGHEG-----ILSTTDNKLY-YGLSLRSEGEKTGYVLLSASE    142
                     .|  :||.|...|     .::..|..:| |...|:.:|...||:|:|...
BL00395___pho    100 SVIKEALESDLNGEGGGFRINPDDESVYRYVQPLKDDGNVNGYILISTPV    149

BSNT_04248___    143 KS-DGLKGELWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATEL    191
                     .| ..:..::|.:|..||.|||::|....:.:||:|...|||||.||.||
BL00395___pho    150 DSLQDINQKIWILLGVSLGTAFLIIAGLGARITSQYTNPIESATQVAIEL    199

BSNT_04248___    192 SKGNYDARTYGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIE    241
                     :||||.|||:.   .....|..::|.||.:|.:|||.||||||||.||||
BL00395___pho    200 AKGNYKARTFN---EDETMLSQSINMLAQNLQDMTRAQEMQRDRLQTVIE    246

BSNT_04248___    242 NIGSGLIMIDGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQL    291
                     ||.||||:|||:|:|:||||:|.||||:..:.:|...||:..||||:|.|
BL00395___pho    247 NIDSGLILIDGKGYIHLVNRAYQKQFHVEADQLLYHFYHEVLEHEEIINL    296

BSNT_04248___    292 VEDIFMTETKKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDM    341
                     :|:|||||.|..|:.:|||||||||||||||||:|.:|||||||||||||
BL00395___pho    297 IEEIFMTEAKVRKMFKLPIKIERRYFEVDGVPIIGINDEWKGIVLVFHDM    346

BSNT_04248___    342 TETKKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFL    391
                     ||.|:||:||||||||||||||||||||||||||||||||.::|.|.:||
BL00395___pho    347 TERKQLEEMRKDFVANVSHELKTPITSIKGFTETLLDGAMNERETLLQFL    396

BSNT_04248___    392 SIILKESERLQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKH    441
                     |||||||.|||:|:||||||||||||||||:|:.....::|.|||.|||:
BL00395___pho    397 SIILKESSRLQTLIQDLLDLSKIEQQNFTLNIQNCNIGEILAEIEMLLKN    446

BSNT_04248___    442 KADEKGISLHLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAI    491
                     ||:||||:|.|..|..|...||||:||||:||||||||||||||.|||.|
BL00395___pho    447 KAEEKGITLTLEKPDKPAVASGDPHRLKQIFLNLVNNALTYTPEDGSVTI    496

BSNT_04248___    492 NVKPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGL    541
                     :....|..:|::|.|:||||::.|||||||||||:|||||||||||||||
BL00395___pho    497 SADVLEDAVQVKVRDTGIGIKQSEIPRIFERFYRIDKDRSRNSGGTGLGL    546

BSNT_04248___    542 AIVKHLIEAHEGKIDVTSEPGRGTVFTVTLKRAAEKSA    579
                     ||||||:|||:|:|||.||.|:||.|||.||||:|   
BL00395___pho    547 AIVKHLVEAHQGEIDVESERGKGTEFTVRLKRASE---    581


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