Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04235 and BL00388

See DNA alignment / Visit BSNT_04235 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_04235___nrdR.1.5803.seq
#    -bsequence pep-align/BL00388___nrdR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04235___nrdR-BL00388___nrdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04235___nrdR-BL00388___nrdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04235___nrdR
# 2: BL00388___nrdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     137/152 (90.1%)
# Similarity:   148/152 (97.4%)
# Gaps:           0/152 ( 0.0%)
# Score: 724.0
# 
#
#=======================================

BSNT_04235___      1 MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLI     50
                     ||||:|||||||||||||||:|:|||||||||||:|||||||||||.|||
BL00388___nrd      1 MKCPACQHNGTRVLDSRPVDEGRSIRRRRECESCNYRFTTFEKVEEIPLI     50

BSNT_04235___     51 VVKKEGVREEFSREKMLRGLIKACGKRPVSLKTLEDMCFDIEKELRNQGC    100
                     ||||||:|||||||||||||||||.||||:||.|||:||:|||||||||.
BL00388___nrd     51 VVKKEGIREEFSREKMLRGLIKACEKRPVALKQLEDICFEIEKELRNQGV    100

BSNT_04235___    101 SEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKK    150
                     |||||:::||||||||||||||||||||||||||||||||||||||||||
BL00388___nrd    101 SEVKSDMIGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKK    150

BSNT_04235___    151 ER    152
                     ||
BL00388___nrd    151 ER    152


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