Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04173 and BL00336
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_04173___yshB.1.5803.seq
# -bsequence pep-align/BL00336___yshB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04173___yshB-BL00336___yshB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04173___yshB-BL00336___yshB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04173___yshB
# 2: BL00336___yshB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 108/178 (60.7%)
# Similarity: 139/178 (78.1%)
# Gaps: 1/178 ( 0.6%)
# Score: 562.0
#
#
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BSNT_04173___ 1 MLDIIILILLLMGTLLGLKRGFILQFIRLTSFILSIAFAALFYKNVAPHL 50
||||||:||||.|..:|||||||.|||||.:||.:||.||.:|.::||.|
BL00336___ysh 1 MLDIIIIILLLSGLFIGLKRGFIRQFIRLVTFIAAIAVAATYYGDLAPKL 50
BSNT_04173___ 51 HWIPAPDFSAGQPALSFFTGNLEAAYYNAIAFIVLFIIAKILLRIIGSFL 100
.|||:|||:.||.||:|..|:||.||||.|||::|||:..||||:..|||
BL00336___ysh 51 GWIPSPDFTGGQAALAFVNGSLEGAYYNMIAFLILFILTIILLRVAASFL 100
BSNT_04173___ 101 SIVAGIPVIKQINQLLGAVLGFLEVYLFTFVLLYVASVLPVDALQQMMGQ 150
..||.|||:|||||:|||||||.|:|||.||:|::.::||:|.||.||..
BL00336___ysh 101 DAVASIPVLKQINQILGAVLGFAEIYLFVFVVLFIGTLLPIDVLQSMMAG 150
BSNT_04173___ 151 SSLANVIINHTPYLSGLLQELWTQYGA- 177
|.:|::||:.||:||.:|..|..|||:
BL00336___ysh 151 SVMADLIIHKTPFLSNMLNNLLHQYGSL 178
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