Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04167 and BL00330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence pep-align/BSNT_04167___ysiA.1.5803.seq
# -bsequence pep-align/BL00330___ysiA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04167___ysiA-BL00330___ysiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04167___ysiA-BL00330___ysiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04167___ysiA
# 2: BL00330___ysiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 151/200 (75.5%)
# Similarity: 170/200 (85.0%)
# Gaps: 6/200 ( 3.0%)
# Score: 757.0
#
#
#=======================================
BSNT_04167___ 1 MKQKRPKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNK 50
||||||||||||||||.|||||||||:|||||||||||||||||||||||
BL00330___ysi 1 MKQKRPKYMQIIDAAVIVIAENGYHQAQVSKIAKQAGVADGTIYLYFKNK 50
BSNT_04167___ 51 EDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAGDHNL 100
|||||||||||||||||:|.|::..|.:|.|||:|.|.|||.||:.|.:|
BL00330___ysi 51 EDILISLFKEKMGQFIEQMSEEMTAKNSATEKLSLFIKKHFELLSSDRHL 100
BSNT_04167___ 101 AIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGELKEGLDVR 150
||||||||||||||||.||||||||||.||:.|:|||.::||.|..||||
BL00330___ysi 101 AIVTQLELRQSNLELRLKINEILKGYLTILEDIITEGKEAGEFKSTLDVR 150
BSNT_04167___ 151 LARQMIFGTIDETVTTWVMNDQKYDLAALSDSVLELLVSGIHNK------ 194
||:||||||:||||||||||||||||..|:||:.|||:.|..::
BL00330___ysi 151 LAKQMIFGTVDETVTTWVMNDQKYDLPNLADSIHELLIHGFSSQKTKEEE 200
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