Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06049 and BL00230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence pep-align/BSNT_06049___deoR.1.5803.seq
# -bsequence pep-align/BL00230___deoR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06049___deoR-BL00230___deoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06049___deoR-BL00230___deoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: BL00230___deoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity: 271/313 (86.6%)
# Similarity: 294/313 (93.9%)
# Gaps: 1/313 ( 0.3%)
# Score: 1391.0
#
#
#=======================================
BSNT_06049___ 1 MDREKQQLSIEAARLYYQSDYSQQQIAEQLNISRPTVSRLLQYAKEKGYV 50
||:|||||||||||||||||||||||||||.|||||||||||:|||||||
BL00230___deo 1 MDKEKQQLSIEAARLYYQSDYSQQQIAEQLQISRPTVSRLLQFAKEKGYV 50
BSNT_06049___ 51 QIRVMDPFEDLDALGSILEEKYGLLEAHVVFSPTPDYAGITHDLSRYGAE 100
||||||||||:||||::|||||||||||||||||.||..|||.|||:|||
BL00230___deo 51 QIRVMDPFEDMDALGAMLEEKYGLLEAHVVFSPTADYTTITHYLSRFGAE 100
BSNT_06049___ 101 YMHETVKDGDIVGVSWGTTMYQIAQNMQPKQVKGVEVVQLKGGISHSRVS 150
|||..|||||||||||||||||||||||||||||.||||||||||||.|:
BL00230___deo 101 YMHGAVKDGDIVGVSWGTTMYQIAQNMQPKQVKGAEVVQLKGGISHSSVN 150
BSNT_06049___ 151 TYSAETIQLFAEAFQTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGK 200
|||:|||||||||||||||||||||||||.:||:|||:||||:|||||||
BL00230___deo 151 TYSSETIQLFAEAFQTMPRYLPLPVVFDNPEVKQMVEQDRHIKRIIEMGK 200
BSNT_06049___ 201 QANIALFTVGTVRDEALLFRLGYFNEEEKALLKKQAVGDICSRFFDAKGN 250
||||||||||||||||||||||||:||||||||::.|||||||||||:||
BL00230___deo 201 QANIALFTVGTVRDEALLFRLGYFHEEEKALLKERGVGDICSRFFDAEGN 250
BSNT_06049___ 251 ICSSAINDRTIGVELEDLRLKERSILVAGGSRKVSSIHGALTGKYANVLI 300
|||.||:.||||:||.|||.|||||||||||||.::|||||.||||||||
BL00230___deo 251 ICSDAIDSRTIGIELADLREKERSILVAGGSRKKAAIHGALKGKYANVLI 300
BSNT_06049___ 301 IDQHTARALVNDL 313
||||||:.|::|
BL00230___deo 301 IDQHTAKELLDD- 312
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