Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00376 and BL00184

See DNA alignment / Visit BSNT_00376 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00376___glpQ.1.5803.seq
#    -bsequence pep-align/BL00184___glpQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00376___glpQ-BL00184___glpQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00376___glpQ-BL00184___glpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00376___glpQ
# 2: BL00184___glpQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     162/300 (54.0%)
# Similarity:   215/300 (71.7%)
# Gaps:          10/300 ( 3.3%)
# Score: 840.0
# 
#
#=======================================

BSNT_00376___      1 MRKNRILALFVLSLGLLSF---MVTPVSAASKGN-LLSPDRILTVAHRGA     46
                      .|..:.::|:::..:.:|   ......|||... .|:|:::|.||||||
BL00184___glp      1 -MKRLVRSIFLITAAIAAFGFGFSGHAEAASHSQPQLNPNKLLNVAHRGA     49

BSNT_00376___     47 SGYVPEHTILSYETAQKMKADYIELDLQMTKDGKLIVMHDEKLDRTTNGM     96
                     ||:.||||:|:|:..||||.||||:||||||||.|:.||||.|||||||.
BL00184___glp     50 SGHAPEHTLLAYKLGQKMKGDYIEIDLQMTKDGHLVAMHDETLDRTTNGT     99

BSNT_00376___     97 GWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKH    146
                     |:|||:||.:||:|||||||||||||:|||:|.|||||||||::..||:.
BL00184___glp    100 GFVKDYTLKEIKELDAGSWFNEAYPERAKPEYAGLKVPTLEEIIQTFGRS    149

BSNT_00376___    147 ANYYIETKSPDTYPGMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLV    196
                     |.||||||||:.|..|||||:..|:::||.|......:|||||||.|||.
BL00184___glp    150 ARYYIETKSPEDYDHMEEKLLDILKQYKLTGADIHSSKVIIQSFSPESLK    199

BSNT_00376___    197 KVHQLQPNLPTVQLLEAKQMASMTDAALEEIKTYAVGAGPDYKALNQENV    246
                     .:|...||:|.||||...:.|::|||.|::.::|:||.|.::..:.:..|
BL00184___glp    200 IIHNANPNIPLVQLLWYDKPAAITDAELKQYQSYSVGLGMNFDRIGRAYV    249

BSNT_00376___    247 RMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPDLFHKV---KKGY    293
                     :.||..|:|:||||||.:.||.||||||.||:|||:||....|   ||  
BL00184___glp    250 QKIRRTGMLVHPYTVNKKEDMKRLLDWGATGMFTNFPDRLRDVLREKK--    297


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