Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04436 and BL00009

See DNA alignment / Visit BSNT_04436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:37
# Commandline: needle
#    -asequence pep-align/BSNT_04436___ytrB.1.5803.seq
#    -bsequence pep-align/BL00009___ytrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04436___ytrB-BL00009___ytrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04436___ytrB-BL00009___ytrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04436___ytrB
# 2: BL00009___ytrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     224/292 (76.7%)
# Similarity:   257/292 (88.0%)
# Gaps:           0/292 ( 0.0%)
# Score: 1194.0
# 
#
#=======================================

BSNT_04436___      1 MIELRQLSKAIDGNQVLKDVSLTIEKGEIFGLLGRNGSGKTTMLRLIQQI     50
                     ||||:.:||.|||.|:|||:|..:|:||||||||||||||||:|||||||
BL00009___ytr      1 MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQI     50

BSNT_04436___     51 IFADSGTILFDGVEIKKHPKVKQNIIYMPVQNPFYDKYTYKQLVDILRRI    100
                     :..|.|.|.|..|::|.||.||:||:||||||.:::||.|||||:|||.|
BL00009___ytr     51 LLPDEGDIFFGSVKVKDHPLVKRNIVYMPVQNTYFEKYNYKQLVNILRNI    100

BSNT_04436___    101 YPKFDVTYANELMNRYEIPETKKYRELSTGLKKQLSLVLSFAARPALILL    150
                     ||.|||||||||||||:|||||||||||||||||:||:||||.|||:|||
BL00009___ytr    101 YPDFDVTYANELMNRYDIPETKKYRELSTGLKKQMSLILSFAIRPAVILL    150

BSNT_04436___    151 DEPTDGIDAVTRHDVLQLMVDEVAERDTSILITSHRLEDIERMCNRIGFL    200
                     ||||||||||||.||||||||||||.:|:|||||||||||||||||||||
BL00009___ytr    151 DEPTDGIDAVTRQDVLQLMVDEVAENNTTILITSHRLEDIERMCNRIGFL    200

BSNT_04436___    201 EDNRLTNVMDLDELKEEYIKIQMAFDTDVNLAIREQNIPMLDQAGVFYTV    250
                     |||.|:|:|||||||.::|||||||:.||||.|||:.||:||..||||||
BL00009___ytr    201 EDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPVLDHTGVFYTV    250

BSNT_04436___    251 LIPKSDEEKKSFLRELKPKVWNELPVNLEEVFIAKFGGKRRW    292
                     |:||.|...|.||:.|.|||||||||:||||||||:||||||
BL00009___ytr    251 LVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW    292


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