Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06280 and RBAM_038070

See Amino acid alignment / Visit BSNT_06280 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:43
# Commandline: needle
#    -asequence dna-align/BSNT_06280___spo0J.1.9828.seq
#    -bsequence dna-align/RBAM_038070___spo0J.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06280___spo0J-RBAM_038070___spo0J.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06280___spo0J-RBAM_038070___spo0J.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06280___spo0J
# 2: RBAM_038070___spo0J
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity:     700/853 (82.1%)
# Similarity:   700/853 (82.1%)
# Gaps:           5/853 ( 0.6%)
# Score: 2877.0
# 
#
#=======================================

BSNT_06280___      1 ATGGCTAAAGGC---CTTGGAAAAGGGATTAATGCGTTATTTAATCAGGT     47
                     ||||||||||||   ||.||||||||||||||.|||||.|||||||||||
RBAM_038070__      1 ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAACGCGTTGTTTAATCAGGT     50

BSNT_06280___     48 AGATTTGTCTGAAGAGACAGTTGAAGAAATTAAAATTGCCGATTTACGCC     97
                     .||||||||||||||||||||.|||||.||||||||....||||||||||
RBAM_038070__     51 TGATTTGTCTGAAGAGACAGTGGAAGAGATTAAAATCAGTGATTTACGCC    100

BSNT_06280___     98 CTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAA    147
                     |.|||||||||||||||||||||||.|||||.||.|||.|||||||||||
RBAM_038070__    101 CCAATCCTTATCAGCCAAGAAAACAATTTGACGATGAGTCATTAGCTGAA    150

BSNT_06280___    148 CTAAAAGAATCTGTGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAG    197
                     ||.||.||||||.|..|.||||||||||||||||||||..|||||||.||
RBAM_038070__    151 CTGAAGGAATCTATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAG    200

BSNT_06280___    198 AAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGTTTTCGAG    247
                     ||||||.||.||.||||||||||||||.||.||.|||||.||||..||.|
RBAM_038070__    201 AAAATCATTGAAGGGCTATGATATTGTAGCCGGCGAACGCCGTTACCGCG    250

BSNT_06280___    248 CGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTA    297
                     |.|||||.||.||.|||..|||.|||||.|||||.||.||.||.||.|||
RBAM_038070__    251 CCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCTATCGTGCGGGATTTA    300

BSNT_06280___    298 TCAGAGGCGTTAATGAGGGAAATTGCTTTATTAGAAAATCTTCAGCGTGA    347
                     ||.||..||.|.|||.|||||||.|||.|.||.|||||.|||||||||||
RBAM_038070__    301 TCTGAATCGCTGATGCGGGAAATCGCTCTTTTGGAAAACCTTCAGCGTGA    350

BSNT_06280___    348 AGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAAC    397
                     |||.|||||.||||||||||||||||.||||||||||||.|||.||||.|
RBAM_038070__    351 AGACTTATCACCGCTTGAAGAGGCTCTGGCATATGACTCATTGCTGAAGC    400

BSNT_06280___    398 ACTTAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGA    447
                     |.||.|||.|.||.||.||.|||||.||.|||||.||.|||||||||||.
RBAM_038070__    401 ATTTGGATTTAACCCAGGAACAGCTCGCTAAACGGCTCGGGAAAAGCAGG    450

BSNT_06280___    448 CCGCATATTGCGAATCATTTAAGACTGCTGACACTGCCAGAAAATATTCA    497
                     ||.||||||||.||.|||||||||||||||||.|||||.||||..||.||
RBAM_038070__    451 CCTCATATTGCCAACCATTTAAGACTGCTGACGCTGCCGGAAAGCATCCA    500

BSNT_06280___    498 GCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTT-    546
                     |.|.||.|||||.|||||||||.|.||.||||||||.||..|.|| ||| 
RBAM_038070__    501 GAACCTCATTGCAGAAGGTACGTTATCCATGGGACACGGCAGAAC-CTTG    549

BSNT_06280___    547 CTTGGCTTAAAAAACAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGAT    596
                     |||||.||.|||||.|||.|.||||||||.|||||.||..|.||||||.|
RBAM_038070__    550 CTTGGTTTGAAAAATAAAGACAAGCTTGAGCCGCTTGTGAAGAAAGTGGT    599

BSNT_06280___    597 TGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGCAGTTGA    646
                     ||..||.|||||.||.||.||.||||||||||||||||||||||||||.|
RBAM_038070__    600 TGAAGAACAGCTGAACGTCCGTCAGCTTGAGCAGCTGATTCAGCAGTTAA    649

BSNT_06280___    647 ATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCG    696
                     |..|.|||||||||||||||||||||||||||||||||||..||||||..
RBAM_038070__    650 ACAACAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTTCAAGATGTT    699

BSNT_06280___    697 GTTCTAAAAGAGCGAGAATCCTATCTCCAAAATTATTTTGGAACAACAGT    746
                     ||..||||||||||.|||||.|||.|.|||||||||||.|||||||||||
RBAM_038070__    700 GTGTTAAAAGAGCGGGAATCGTATTTGCAAAATTATTTCGGAACAACAGT    749

BSNT_06280___    747 TAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCT    796
                     .|||||.||.|||||.|||||||||||.||.||.||.|||||.|||||||
RBAM_038070__    750 AAATATAAAGAGACAAAAGAAAAAAGGGAAGATTGAGATTGAGTTTTTCT    799

BSNT_06280___    797 CTAATGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCA    846
                     |.||||||||.|||||.||.||..||||.||.|||||||||.|||||.|.
RBAM_038070__    800 CAAATGAAGATCTTGAACGTATCCTAGAACTATTGTCTGAAAGAGAAGCG    849

BSNT_06280___    847 TAA    849
                     |||
RBAM_038070__    850 TAA    852


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06280 and RBAM_038070

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
