Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06274 and RBAM_038020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:43
# Commandline: needle
# -asequence dna-align/BSNT_06274___yyaE.1.9828.seq
# -bsequence dna-align/RBAM_038020___yyaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06274___yyaE-RBAM_038020___yyaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06274___yyaE-RBAM_038020___yyaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06274___yyaE
# 2: RBAM_038020___yyaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2034
# Identity: 1581/2034 (77.7%)
# Similarity: 1581/2034 (77.7%)
# Gaps: 60/2034 ( 2.9%)
# Score: 6056.0
#
#
#=======================================
BSNT_06274___ 1 ATGAGCAAAGTGCATCAGTCGGCATGTCCGCTGAATTGTTGGGACAGCTG 50
||||||||||||||||||||.||.||.|||||||||||.|||||||||||
RBAM_038020__ 1 ATGAGCAAAGTGCATCAGTCAGCGTGCCCGCTGAATTGCTGGGACAGCTG 50
BSNT_06274___ 51 CGGCTTTTTGGTGACTGTTGATGATGGAAAGGTAACAAAAGTGGACGGAG 100
|||||||||||||||.|||||.|||||||||||.||.|||||.|||||||
RBAM_038020__ 51 CGGCTTTTTGGTGACAGTTGAGGATGGAAAGGTGACGAAAGTAGACGGAG 100
BSNT_06274___ 101 ATCCAAACCATCCGATTACGGAAGGTAAAATCTGCGGCCGCGGCAGAATG 150
|.||.||.|||||.|||||||||||.|||||.||||||||.|||||||||
RBAM_038020__ 101 ACCCGAATCATCCCATTACGGAAGGGAAAATTTGCGGCCGTGGCAGAATG 150
BSNT_06274___ 151 CTTGAGACAAAAACAAATTCGCCTGATCGGCTTCGCTATCCAATGAAAAA 200
||.|||.|.|||||.|||.||||.||.||||||||.|.||| .|.|||||
RBAM_038020__ 151 CTGGAGGCGAAAACGAATGCGCCGGAACGGCTTCGTTTTCC-TTTAAAAA 199
BSNT_06274___ 201 ACA-AAATGGCGAGTTTGTGCGGATTTCTTGGGAGCAGGCACTTGATGAA 249
|.| |.|.|||||.|||||.||.|||||.|||||||||||..|.||||||
RBAM_038020__ 200 AGATAGACGGCGAATTTGTCCGCATTTCCTGGGAGCAGGCGTTAGATGAA 249
BSNT_06274___ 250 ATTGCCGATAAACTTCGGGAAATCAAGGAAACGTCGGAGACGACTGCTGT 299
|||||.||.|||.|...||..||.|||||.||||.||..||..|.||.||
RBAM_038020__ 250 ATTGCTGAAAAAATGGCGGTGATTAAGGAGACGTTGGGCACTGCCGCAGT 299
BSNT_06274___ 300 TTTGCACAGCCATGATTATGCGAATAACGGTCTGTTAAAAGCGCTTGATC 349
..|||||||.||||||||.||.|||||||||||.||.||.|||||.||.|
RBAM_038020__ 300 GCTGCACAGTCATGATTACGCCAATAACGGTCTTTTGAAGGCGCTCGACC 349
BSNT_06274___ 350 AGCGTTTTTTTAATGGATATGGCGGCGTGACCGAAATCGTCGGAAGCATA 399
||||||||||.||||||||.|||||.|||||.||.||.|..||.|||||.
RBAM_038020__ 350 AGCGTTTTTTCAATGGATACGGCGGTGTGACGGAGATTGCGGGCAGCATT 399
BSNT_06274___ 400 TGCTGGGGCTCCGGTATCGAGGCGCAAAGCTGGGATTTTGGCCGTTCGTA 449
||||||||.|||||.||.||.|||||..||||||||||.||.|||||.||
RBAM_038020__ 400 TGCTGGGGTTCCGGCATTGAAGCGCAGCGCTGGGATTTCGGGCGTTCTTA 449
BSNT_06274___ 450 CGGTCACGGACCGCTTGATATTTACAACAGCAAGCATGTTGTTGTGTGGG 499
|||.||.|||||||||||||||||..|||||||||||||..|.||.||||
RBAM_038020__ 450 CGGGCATGGACCGCTTGATATTTATCACAGCAAGCATGTGATCGTATGGG 499
BSNT_06274___ 500 GAAGAAATGTATCCAGAACAAATATGCACTTATACCACCACTTGCAGCAG 549
|.|||||.||.|||.|.||.|||||||||.|.||.||.||..||||||||
RBAM_038020__ 500 GCAGAAACGTGTCCCGGACGAATATGCACCTCTATCATCATCTGCAGCAG 549
BSNT_06274___ 550 GTGAAAAAGAAGGGCGCCACAATTACGGTGATTGATCCGATCTTCAATCC 599
|||||.||.||.||.||.|||.|.|||||.||||||||.||.||.||.||
RBAM_038020__ 550 GTGAAGAAAAAAGGAGCGACACTGACGGTCATTGATCCTATTTTTAACCC 599
BSNT_06274___ 600 GACTGCCAAGCTTGCCGATCGCTATATCTCTGTAAAGCCAGGAATGGACG 649
|||||||||||||||||||||.|||||.||.||.||.||.||.|||||.|
RBAM_038020__ 600 GACTGCCAAGCTTGCCGATCGGTATATATCCGTTAAACCCGGCATGGATG 649
BSNT_06274___ 650 GCTGGCTTGCGGCAGCCGTTTTGAAAGTTCTGATT----GAGACGGGAAG 695
|||||||||||||.|..|||||.||||| ||| .|.||.||.||
RBAM_038020__ 650 GCTGGCTTGCGGCGGGTGTTTTAAAAGT----ATTATGCCAAACCGGCAG 695
BSNT_06274___ 696 AACGGAT---GAAACGTTTATTTCTGA-GCACTCTGTCGGTTTTGATGAT 741
|||.||| || |||..|||..| |||.||.|||||||||||.||.
RBAM_038020__ 696 AACCGATTCCGA----TTTCATTCAAAGGCATTCGGTCGGTTTTGAAGAA 741
BSNT_06274___ 742 GT-GAAAGAGCTTTTGAAGACCGTTTCTCTGGAAGAGTTTATTGTGAAAA 790
.| |||| |||||.||.||||..|||||.|.||.|||.|.||||.|||||
RBAM_038020__ 742 ATAGAAA-AGCTTCTGCAGACGATTTCTATTGAGGAGATCATTGAGAAAA 790
BSNT_06274___ 791 CAGAAACTTCTATGGAGGACCTGGAGTATCTGGCCGCTTTGTATGCTGAT 840
|||||||.|||.|.||.|...|.||.|||||.||.|.|||.||||||||.
RBAM_038020__ 791 CAGAAACGTCTTTAGAAGTGATTGAATATCTTGCTGATTTATATGCTGAC 840
BSNT_06274___ 841 GGTCCGGTGTCTACTTTTATGGGGCTTGGCATGCAGCGTTATAAAAACGG 890
|||||.|..||.|||||||||||.|||||.||||||.|.|||||||||||
RBAM_038020__ 841 GGTCCCGCCTCCACTTTTATGGGTCTTGGGATGCAGAGATATAAAAACGG 890
BSNT_06274___ 891 CGGGGGAACGATTCGTTGGATTGATGCACTCGTTGCGGCAAGCGGAAATG 940
.||.||.|||||.||.||||||||.||..|.|.||||||.||||||||||
RBAM_038020__ 891 GGGCGGGACGATACGGTGGATTGACGCTTTAGCTGCGGCGAGCGGAAATG 940
BSNT_06274___ 941 TCGGAATTAAGGGCGGCGGCGCGAATTTCGGAAATGTCCAGATTGGTGAG 990
||||.||.||.|||||||||||.||.|||||||||||.||..|.|||||.
RBAM_038020__ 941 TCGGTATCAAAGGCGGCGGCGCAAACTTCGGAAATGTGCAAGTCGGTGAA 990
BSNT_06274___ 991 AGCTTTGCAAAAACAAAGCTGACGCTGCCGGAATTAAAAACAACATCCCG 1040
|||||||||||..|..||||.||.|..||.||..|.||.|.||..||..|
RBAM_038020__ 991 AGCTTTGCAAAGGCTGAGCTCACCCGTCCTGATCTGAAGAAAAGTTCGAG 1040
BSNT_06274___ 1041 TTCTTTTTCAATGATGACACAGGCTGAAGAAGTGTTGACCGCTGCTGATC 1090
..|.|||||.||||||||.||.||.|||||.|.|.|||..||.||.||||
RBAM_038020__ 1041 AACGTTTTCGATGATGACTCAAGCCGAAGAGGCGCTGAATGCAGCCGATC 1090
BSNT_06274___ 1091 CTGCGATTGAGATGATTATTGTGACGTGCGGAAATCCGCTGACTCAGGTG 1140
|..|||||||||||||.||.|||||||||||.|||||||||||.||||||
RBAM_038020__ 1091 CGCCGATTGAGATGATCATCGTGACGTGCGGCAATCCGCTGACACAGGTG 1140
BSNT_06274___ 1141 CCGAATACAAATAAGGTGAGACAAGCATTTGAAAAGGTTCCCATGACGGT 1190
|||||||||||.||.||||...|||||||||||||....||..|.||.||
RBAM_038020__ 1141 CCGAATACAAAAAAAGTGAAGGAAGCATTTGAAAAAACACCGGTCACAGT 1190
BSNT_06274___ 1191 CGCGATTGATTCCATTATGACGGATACCGCAGAGCTGTGTGATTATGTTT 1240
.||.||||||||..|.|||||.|||||.||..||||.|||||.|||||..
RBAM_038020__ 1191 GGCCATTGATTCTGTCATGACCGATACGGCGAAGCTCTGTGACTATGTGC 1240
BSNT_06274___ 1241 TGCCGACTGCCACTGTTTTTGAAGAAGAAGATATCTACTATTCCAGTATG 1290
|||||||.|||..||||||.|||||.||||||||.||.||||||||.|||
RBAM_038020__ 1241 TGCCGACGGCCGTTGTTTTCGAAGAGGAAGATATTTATTATTCCAGCATG 1290
BSNT_06274___ 1291 TATCATCATTATGTTCAGTACGGGAAGAAGCTTGTGGAGCCGCAGGGTGA 1340
||||||||.||||||||.||.||.||||||||||.|||.||||||||.||
RBAM_038020__ 1291 TATCATCACTATGTTCAATATGGCAAGAAGCTTGCGGAACCGCAGGGAGA 1340
BSNT_06274___ 1341 AGCGAAATCGGACAGCTGGATCTGGTCAGAGCTTGCAAAACGTCTTGGGT 1390
.||.|||||.|||.|||||||||||.|.||.||.|||||.|||||.||.|
RBAM_038020__ 1341 GGCAAAATCAGACCGCTGGATCTGGACGGAACTCGCAAAGCGTCTCGGAT 1390
BSNT_06274___ 1391 TTGGCGAGCTGTTTGAATACAGCACTCAAGAATTTTTAGAGATGGGGCTT 1440
|.||.|||||.|||||.|||||.||..||||.||.|||.|.||||||||.
RBAM_038020__ 1391 TCGGGGAGCTCTTTGATTACAGTACGGAAGATTTCTTAAAAATGGGGCTC 1440
BSNT_06274___ 1441 TCCTCATTGGAAGCAG-AGGATGTGACACTTGAGCGTTTAAAAGAAAAAG 1489
||.||.|||||...|| |||| .|.||.|||||||..|||||.|||||||
RBAM_038020__ 1441 TCTTCTTTGGAGAAAGAAGGA-ATCACCCTTGAGCAATTAAAGGAAAAAG 1489
BSNT_06274___ 1490 GCCACCTCCCTCTTCCAGTAAAACAGGTGCCGTGGGATGATTATCAGTTT 1539
|.||..|.||.|||||.||.||||||||.||||||..|||||.|||.|||
RBAM_038020__ 1490 GACATATGCCGCTTCCGGTCAAACAGGTTCCGTGGAGTGATTTTCAATTT 1539
BSNT_06274___ 1540 TTGACGCCGAGTGGAAAATTTGAATTTACTTCGTCGCTAGCTGAGCAAAA 1589
||.||.|||||.||||||||||||||....|||||.||.||.||..|.||
RBAM_038020__ 1540 TTAACCCCGAGCGGAAAATTTGAATTCGTCTCGTCACTGGCAGAAGAGAA 1589
BSNT_06274___ 1590 AGGATTTAGCGG-CTCGCTTCAATTAAATGTGCCCGAAGAATCTGTTTTC 1638
|||||..||||| ||| |.||||||..|.|||||.||.||.|||||||
RBAM_038020__ 1590 AGGATACAGCGGCCTC-CCTCAATTGGAAGTGCCGGAGGAGTCTGTTT-- 1636
BSNT_06274___ 1639 CATAATGA----GGAGTTAGCTGAAAAGTACCCTTATACGCTGTTATCCA 1684
||.|||| ||| .|.||.|..||.||.||.|||||||||.|.||||
RBAM_038020__ 1637 -ATCATGACGCCGGA-CTGGCGGGGAAATATCCGTATACGCTGCTGTCCA 1684
BSNT_06274___ 1685 TTCATCCGCAGCGTTCCAACCATTCACAGCATGTGCCGTTTATTGAAAAG 1734
||||.||||||||.|||||.|||||||||||.||||||||||||||||||
RBAM_038020__ 1685 TTCACCCGCAGCGCTCCAATCATTCACAGCACGTGCCGTTTATTGAAAAG 1734
BSNT_06274___ 1735 CTTCAGCACGTTCAGGTCGATATTTCTCCAGATATAGCTGCTGAGCAGAA 1784
||||||||..|||||||.|||.|.|||||.|||||.||.|..||||
RBAM_038020__ 1735 CTTCAGCAGATTCAGGTGGATCTGTCTCCGGATATCGCCGAGGAGC---- 1780
BSNT_06274___ 1785 T----CTTCAGGATGGAGA------CGAGGTTGTCAT-CTTTAATGACCG 1823
| |||||.||.||||| .||||| || | ||||||||
RBAM_038020__ 1781 TTTCACTTCAAGACGGAGATACGGCAGAGGT----ATAC---AATGACCG 1823
BSNT_06274___ 1824 CGGACGCTTGAAGGGCAAGGTGAAAGTGATGAAGCAGGCTCATGCGAAGA 1873
|||.||..||...||||.|||||||.|.||||||||||||||..||||||
RBAM_038020__ 1824 CGGCCGTCTGCGCGGCAGGGTGAAAATCATGAAGCAGGCTCACCCGAAGA 1873
BSNT_06274___ 1874 CGATTAATATAGATGAAGGCATGTGGGCGGCTTTTGGAGGGTCAGTCAAT 1923
||.|.||||||||||||||||||||||||||.||.|||||.||.|||||
RBAM_038020__ 1874 CGGTGAATATAGATGAAGGCATGTGGGCGGCATTCGGAGGCTCCGTCAA- 1922
BSNT_06274___ 1924 GCA--CTGACAAATGATACAAATTCTGATAATGGAATGGGAAGTACGCTT 1971
|| ||.|||||.|||.||||||||||||||||||||||||||||||||
RBAM_038020__ 1923 -CATGCTCACAAAGGATTCAAATTCTGATAATGGAATGGGAAGTACGCTT 1971
BSNT_06274___ 1972 TTTGACTGTTTAGTAG-GCTTGAAAAAAGCATAA 2004
|||||||||.|.|||| |.|| |||||||.||||
RBAM_038020__ 1972 TTTGACTGTCTGGTAGCGGTT-AAAAAAGGATAA 2004
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