Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06272 and RBAM_038010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:43
# Commandline: needle
# -asequence dna-align/BSNT_06272___yyaF.1.9828.seq
# -bsequence dna-align/RBAM_038010___engD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06272___yyaF-RBAM_038010___engD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06272___yyaF-RBAM_038010___engD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06272___yyaF
# 2: RBAM_038010___engD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 914/1101 (83.0%)
# Similarity: 914/1101 (83.0%)
# Gaps: 0/1101 ( 0.0%)
# Score: 3822.0
#
#
#=======================================
BSNT_06272___ 1 ATGGCTTTAACAGCTGGAATTGTTGGTTTGCCGAACGTCGGAAAATCAAC 50
|||||||||||.|||||||||||.|||||||||||.|||||||||||.||
RBAM_038010__ 1 ATGGCTTTAACTGCTGGAATTGTCGGTTTGCCGAATGTCGGAAAATCGAC 50
BSNT_06272___ 51 ACTATTTAACGCAATTACACAGGCCGGTGCCGAATCAGCCAACTACCCGT 100
..|||||||.||||||||.|||||.|||||||||||||||||||||||||
RBAM_038010__ 51 GTTATTTAATGCAATTACCCAGGCTGGTGCCGAATCAGCCAACTACCCGT 100
BSNT_06272___ 101 TCTGTACAATTGATCCGAACGTGGGAATTGTAGAGGTGCCGGATGATCGT 150
||||||||||||||||||||||||||||.||.||.|||||||||||.|||
RBAM_038010__ 101 TCTGTACAATTGATCCGAACGTGGGAATCGTGGAAGTGCCGGATGAACGT 150
BSNT_06272___ 151 CTGCAAAAGCTGACTGAGCTGGTCAACCCGAAGAAGACTGTGCCGACTGC 200
|||||||||||||||||..||||.||||||||.||.||.|||||||||||
RBAM_038010__ 151 CTGCAAAAGCTGACTGAATTGGTGAACCCGAAAAAAACGGTGCCGACTGC 200
BSNT_06272___ 201 TTTTGAATTCACTGATATTGCAGGGATTGTAAAGGGCGCATCTAAAGGAG 250
.|||||||||||||||||.||.|||||.|||||.||||||||.|||||.|
RBAM_038010__ 201 GTTTGAATTCACTGATATCGCGGGGATCGTAAAAGGCGCATCAAAAGGTG 250
BSNT_06272___ 251 AAGGACTCGGCAACAAGTTCCTATCTCATATTCGCCAAGTTGACGCGATT 300
||||||||||.||.|||||.||.||||||||.||.||.||.||.|||||.
RBAM_038010__ 251 AAGGACTCGGAAATAAGTTTCTTTCTCATATCCGTCAGGTAGATGCGATC 300
BSNT_06272___ 301 TGCCACGTTGTCCGTGCTTTTTCCGATGACAACATTACACACGTTTCCGG 350
|||||||||||.||.||.||..|.||||||||.|||||.|||||.||.||
RBAM_038010__ 301 TGCCACGTTGTACGCGCATTCGCTGATGACAATATTACGCACGTGTCAGG 350
BSNT_06272___ 351 AAAGGTTGATCCGATTGATGACATTGAAACGATCAACCTTGAGCTGATCC 400
.||.||.|||||||||||.||.||||||||||||||.|||||..||||.|
RBAM_038010__ 351 GAAAGTCGATCCGATTGACGATATTGAAACGATCAATCTTGAATTGATTC 400
BSNT_06272___ 401 TCGCTGATATGGAAACGGTTGAAAAGCGGATTACACGCGTCAGCAAGCTT 450
|.||.||.|||||.||.||.|||||.||.||.||.||.||.|||||||||
RBAM_038010__ 401 TTGCCGACATGGAGACAGTCGAAAAACGCATCACGCGTGTAAGCAAGCTT 450
BSNT_06272___ 451 GCGAAGCAAAAAGATAAAGACGCTGTATTTGAGTTTGAGATTTTATCTAA 500
||.|||||||||||.|||||.||.||.|||||.|||||.|||.|.|||||
RBAM_038010__ 451 GCTAAGCAAAAAGACAAAGAAGCGGTTTTTGAATTTGACATTCTGTCTAA 500
BSNT_06272___ 501 ACTGAAAGAAGCGTTTGAGAGTGAAAAGCCTGCTCGATCTGTAGAATTCA 550
|.|.||||||||.||.||....|||||||||||.||.||.||.|||||.|
RBAM_038010__ 501 ATTAAAAGAAGCTTTCGAACAAGAAAAGCCTGCCCGTTCCGTTGAATTTA 550
BSNT_06272___ 551 CTGAGGAGCAGCAAAAGCTTGTGAAGCAGCTCCATTTACTGACTTCGAAG 600
|.||.||.|||||||||||||||||||||||.|||||.||.||.||.||.
RBAM_038010__ 551 CGGAAGAACAGCAAAAGCTTGTGAAGCAGCTTCATTTGCTTACGTCAAAA 600
BSNT_06272___ 601 CCTATTTTGTACGTGGCCAACGTAAGTGAAGATGAAGTTGCTGATCCATC 650
||..|..|.||.||.||.||.|||||.||.||||||||.||||||||.||
RBAM_038010__ 601 CCCGTGCTTTATGTAGCAAATGTAAGCGAGGATGAAGTGGCTGATCCTTC 650
BSNT_06272___ 651 TGGCAATGAAAATGTAGCGAAGATTCGCGAGTACGCTGCCGGCGAAAACG 700
.|..||||.|.||||.|||||.||.||.||||||||.||.||.|||||||
RBAM_038010__ 651 AGATAATGGATATGTTGCGAAAATCCGGGAGTACGCCGCGGGTGAAAACG 700
BSNT_06272___ 701 CAGAAGTTATCGTTGTATGTGCAAAAATCGAATCTGAAATCGCTGAGCTT 750
|.|||||||||||.||.||.||.|||||.||.||||||||.|||||..|.
RBAM_038010__ 701 CCGAAGTTATCGTCGTCTGCGCGAAAATTGAGTCTGAAATTGCTGAATTG 750
BSNT_06272___ 751 GAAGGCGAAGAAAAGCAAATGTTCTTGGAAGAGCTGGGCATTCAAGAATC 800
||||||||||||||||||||||||.|.||.|||||.|||||..|||||||
RBAM_038010__ 751 GAAGGCGAAGAAAAGCAAATGTTCCTTGAGGAGCTCGGCATCGAAGAATC 800
BSNT_06272___ 801 AGGTCTTGATCAGCTGATCAAAGCGTCTTACTCTCTTCTCGGCCTCGCAA 850
||||||||||||||||||.||||||||.|||||||||||||||||.||.|
RBAM_038010__ 801 AGGTCTTGATCAGCTGATTAAAGCGTCATACTCTCTTCTCGGCCTTGCGA 850
BSNT_06272___ 851 CATATTTCACAGCCGGAGAACAGGAAGTCAGAGCTTGGACATTCAAAAAA 900
||||.||.||.||.||.|||||||||||..|.||.||||||||||.||||
RBAM_038010__ 851 CATACTTTACGGCGGGCGAACAGGAAGTGCGCGCATGGACATTCAGAAAA 900
BSNT_06272___ 901 GGCATGAAAGCACCTGAGTGTGCAGGAATTATTCATAGTGACTTTGAGCG 950
|||||||||||.|||||||||||.||.||.||.||.|.|||.|||||.||
RBAM_038010__ 901 GGCATGAAAGCTCCTGAGTGTGCGGGTATCATCCACACTGATTTTGAACG 950
BSNT_06272___ 951 GGGCTTCATTCGTGCTGAGACAGTTGCTTATGAGGATCTTCTTGCGGGCG 1000
.|||||.||.||.|||||.||.|||||||||||.||.|||.|.||.||||
RBAM_038010__ 951 CGGCTTTATCCGCGCTGAAACGGTTGCTTATGAAGACCTTTTGGCAGGCG 1000
BSNT_06272___ 1001 GCGGTATGGCAGGAGCTAAAGAGGCAGGAAAAGTCCGCCTTGAAGGGAAA 1050
||||.|||.|.|||||.|||||.||.||||||||.||.||.|||||.||.
RBAM_038010__ 1001 GCGGAATGTCCGGAGCGAAAGAAGCCGGAAAAGTGCGTCTGGAAGGTAAG 1050
BSNT_06272___ 1051 GAATATGTGGTCCAAGACGGAGATGTTATTCATTTCCGATTTAATGTATA 1100
||||||||.|||||||||||||||||.|||||||||||||||||||||||
RBAM_038010__ 1051 GAATATGTAGTCCAAGACGGAGATGTCATTCATTTCCGATTTAATGTATA 1100
BSNT_06272___ 1101 G 1101
|
RBAM_038010__ 1101 G 1101
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