Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06272 and RBAM_038010

See Amino acid alignment / Visit BSNT_06272 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:43
# Commandline: needle
#    -asequence dna-align/BSNT_06272___yyaF.1.9828.seq
#    -bsequence dna-align/RBAM_038010___engD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06272___yyaF-RBAM_038010___engD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06272___yyaF-RBAM_038010___engD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06272___yyaF
# 2: RBAM_038010___engD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity:     914/1101 (83.0%)
# Similarity:   914/1101 (83.0%)
# Gaps:           0/1101 ( 0.0%)
# Score: 3822.0
# 
#
#=======================================

BSNT_06272___      1 ATGGCTTTAACAGCTGGAATTGTTGGTTTGCCGAACGTCGGAAAATCAAC     50
                     |||||||||||.|||||||||||.|||||||||||.|||||||||||.||
RBAM_038010__      1 ATGGCTTTAACTGCTGGAATTGTCGGTTTGCCGAATGTCGGAAAATCGAC     50

BSNT_06272___     51 ACTATTTAACGCAATTACACAGGCCGGTGCCGAATCAGCCAACTACCCGT    100
                     ..|||||||.||||||||.|||||.|||||||||||||||||||||||||
RBAM_038010__     51 GTTATTTAATGCAATTACCCAGGCTGGTGCCGAATCAGCCAACTACCCGT    100

BSNT_06272___    101 TCTGTACAATTGATCCGAACGTGGGAATTGTAGAGGTGCCGGATGATCGT    150
                     ||||||||||||||||||||||||||||.||.||.|||||||||||.|||
RBAM_038010__    101 TCTGTACAATTGATCCGAACGTGGGAATCGTGGAAGTGCCGGATGAACGT    150

BSNT_06272___    151 CTGCAAAAGCTGACTGAGCTGGTCAACCCGAAGAAGACTGTGCCGACTGC    200
                     |||||||||||||||||..||||.||||||||.||.||.|||||||||||
RBAM_038010__    151 CTGCAAAAGCTGACTGAATTGGTGAACCCGAAAAAAACGGTGCCGACTGC    200

BSNT_06272___    201 TTTTGAATTCACTGATATTGCAGGGATTGTAAAGGGCGCATCTAAAGGAG    250
                     .|||||||||||||||||.||.|||||.|||||.||||||||.|||||.|
RBAM_038010__    201 GTTTGAATTCACTGATATCGCGGGGATCGTAAAAGGCGCATCAAAAGGTG    250

BSNT_06272___    251 AAGGACTCGGCAACAAGTTCCTATCTCATATTCGCCAAGTTGACGCGATT    300
                     ||||||||||.||.|||||.||.||||||||.||.||.||.||.|||||.
RBAM_038010__    251 AAGGACTCGGAAATAAGTTTCTTTCTCATATCCGTCAGGTAGATGCGATC    300

BSNT_06272___    301 TGCCACGTTGTCCGTGCTTTTTCCGATGACAACATTACACACGTTTCCGG    350
                     |||||||||||.||.||.||..|.||||||||.|||||.|||||.||.||
RBAM_038010__    301 TGCCACGTTGTACGCGCATTCGCTGATGACAATATTACGCACGTGTCAGG    350

BSNT_06272___    351 AAAGGTTGATCCGATTGATGACATTGAAACGATCAACCTTGAGCTGATCC    400
                     .||.||.|||||||||||.||.||||||||||||||.|||||..||||.|
RBAM_038010__    351 GAAAGTCGATCCGATTGACGATATTGAAACGATCAATCTTGAATTGATTC    400

BSNT_06272___    401 TCGCTGATATGGAAACGGTTGAAAAGCGGATTACACGCGTCAGCAAGCTT    450
                     |.||.||.|||||.||.||.|||||.||.||.||.||.||.|||||||||
RBAM_038010__    401 TTGCCGACATGGAGACAGTCGAAAAACGCATCACGCGTGTAAGCAAGCTT    450

BSNT_06272___    451 GCGAAGCAAAAAGATAAAGACGCTGTATTTGAGTTTGAGATTTTATCTAA    500
                     ||.|||||||||||.|||||.||.||.|||||.|||||.|||.|.|||||
RBAM_038010__    451 GCTAAGCAAAAAGACAAAGAAGCGGTTTTTGAATTTGACATTCTGTCTAA    500

BSNT_06272___    501 ACTGAAAGAAGCGTTTGAGAGTGAAAAGCCTGCTCGATCTGTAGAATTCA    550
                     |.|.||||||||.||.||....|||||||||||.||.||.||.|||||.|
RBAM_038010__    501 ATTAAAAGAAGCTTTCGAACAAGAAAAGCCTGCCCGTTCCGTTGAATTTA    550

BSNT_06272___    551 CTGAGGAGCAGCAAAAGCTTGTGAAGCAGCTCCATTTACTGACTTCGAAG    600
                     |.||.||.|||||||||||||||||||||||.|||||.||.||.||.||.
RBAM_038010__    551 CGGAAGAACAGCAAAAGCTTGTGAAGCAGCTTCATTTGCTTACGTCAAAA    600

BSNT_06272___    601 CCTATTTTGTACGTGGCCAACGTAAGTGAAGATGAAGTTGCTGATCCATC    650
                     ||..|..|.||.||.||.||.|||||.||.||||||||.||||||||.||
RBAM_038010__    601 CCCGTGCTTTATGTAGCAAATGTAAGCGAGGATGAAGTGGCTGATCCTTC    650

BSNT_06272___    651 TGGCAATGAAAATGTAGCGAAGATTCGCGAGTACGCTGCCGGCGAAAACG    700
                     .|..||||.|.||||.|||||.||.||.||||||||.||.||.|||||||
RBAM_038010__    651 AGATAATGGATATGTTGCGAAAATCCGGGAGTACGCCGCGGGTGAAAACG    700

BSNT_06272___    701 CAGAAGTTATCGTTGTATGTGCAAAAATCGAATCTGAAATCGCTGAGCTT    750
                     |.|||||||||||.||.||.||.|||||.||.||||||||.|||||..|.
RBAM_038010__    701 CCGAAGTTATCGTCGTCTGCGCGAAAATTGAGTCTGAAATTGCTGAATTG    750

BSNT_06272___    751 GAAGGCGAAGAAAAGCAAATGTTCTTGGAAGAGCTGGGCATTCAAGAATC    800
                     ||||||||||||||||||||||||.|.||.|||||.|||||..|||||||
RBAM_038010__    751 GAAGGCGAAGAAAAGCAAATGTTCCTTGAGGAGCTCGGCATCGAAGAATC    800

BSNT_06272___    801 AGGTCTTGATCAGCTGATCAAAGCGTCTTACTCTCTTCTCGGCCTCGCAA    850
                     ||||||||||||||||||.||||||||.|||||||||||||||||.||.|
RBAM_038010__    801 AGGTCTTGATCAGCTGATTAAAGCGTCATACTCTCTTCTCGGCCTTGCGA    850

BSNT_06272___    851 CATATTTCACAGCCGGAGAACAGGAAGTCAGAGCTTGGACATTCAAAAAA    900
                     ||||.||.||.||.||.|||||||||||..|.||.||||||||||.||||
RBAM_038010__    851 CATACTTTACGGCGGGCGAACAGGAAGTGCGCGCATGGACATTCAGAAAA    900

BSNT_06272___    901 GGCATGAAAGCACCTGAGTGTGCAGGAATTATTCATAGTGACTTTGAGCG    950
                     |||||||||||.|||||||||||.||.||.||.||.|.|||.|||||.||
RBAM_038010__    901 GGCATGAAAGCTCCTGAGTGTGCGGGTATCATCCACACTGATTTTGAACG    950

BSNT_06272___    951 GGGCTTCATTCGTGCTGAGACAGTTGCTTATGAGGATCTTCTTGCGGGCG   1000
                     .|||||.||.||.|||||.||.|||||||||||.||.|||.|.||.||||
RBAM_038010__    951 CGGCTTTATCCGCGCTGAAACGGTTGCTTATGAAGACCTTTTGGCAGGCG   1000

BSNT_06272___   1001 GCGGTATGGCAGGAGCTAAAGAGGCAGGAAAAGTCCGCCTTGAAGGGAAA   1050
                     ||||.|||.|.|||||.|||||.||.||||||||.||.||.|||||.||.
RBAM_038010__   1001 GCGGAATGTCCGGAGCGAAAGAAGCCGGAAAAGTGCGTCTGGAAGGTAAG   1050

BSNT_06272___   1051 GAATATGTGGTCCAAGACGGAGATGTTATTCATTTCCGATTTAATGTATA   1100
                     ||||||||.|||||||||||||||||.|||||||||||||||||||||||
RBAM_038010__   1051 GAATATGTAGTCCAAGACGGAGATGTCATTCATTTCCGATTTAATGTATA   1100

BSNT_06272___   1101 G   1101
                     |
RBAM_038010__   1101 G   1101


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