Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06270 and RBAM_037990

See Amino acid alignment / Visit BSNT_06270 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:43
# Commandline: needle
#    -asequence dna-align/BSNT_06270___ssb.1.9828.seq
#    -bsequence dna-align/RBAM_037990___ssb.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06270___ssb-RBAM_037990___ssb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06270___ssb-RBAM_037990___ssb.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06270___ssb
# 2: RBAM_037990___ssb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 520
# Identity:     490/520 (94.2%)
# Similarity:   490/520 (94.2%)
# Gaps:           2/520 ( 0.4%)
# Score: 2318.0
# 
#
#=======================================

BSNT_06270___      1 ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037990__      1 ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCT     50

BSNT_06270___     51 TCGTTATACGCCAAACGGTGCGGCTGTTGCTACGTTTACTCTTGCTGTGA    100
                     ||||||||||||||.||||||||||||.||.|||||||||||||||||||
RBAM_037990__     51 TCGTTATACGCCAAGCGGTGCGGCTGTCGCCACGTTTACTCTTGCTGTGA    100

BSNT_06270___    101 ATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAAT    150
                     ||||||||||.|||||||||||||||||||||||.|||||||||||||||
RBAM_037990__    101 ATCGTACATTCACGAACCAGTCCGGAGAACGTGAAGCCGATTTCATTAAT    150

BSNT_06270___    151 TGTGTCACTTGGAGAAGACAAGCCGAAAACGTTGCAAAC-TTCTTGAAAA    199
                     ||||||||||||||||||||||||||||||||||||||| ||||| ||||
RBAM_037990__    151 TGTGTCACTTGGAGAAGACAAGCCGAAAACGTTGCAAACTTTCTT-AAAA    199

BSNT_06270___    200 AAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGAAACTATGAA    249
                     |||||||||||||.||||||||.|||||..|.||.||||||||.||||||
RBAM_037990__    200 AAGGAAGCCTTGCCGGCGTAGACGGCCGACTCCAGACAAGAAATTATGAA    249

BSNT_06270___    250 AACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGT    299
                     ||||||||.|||||||||||||||||||||||.|||||||||||||||||
RBAM_037990__    250 AACCAGCAGGGACAGCGTGTCTTCGTGACAGAAGTCCAAGCTGAAAGTGT    299

BSNT_06270___    300 TCAATTTCTTGAGCCGAAAAACGGCGGCGGTTCTGGTTCAGGTGGATACA    349
                     |||||||||||||||.||||||.|||||||||||||.|||||.|||||||
RBAM_037990__    300 TCAATTTCTTGAGCCTAAAAACAGCGGCGGTTCTGGATCAGGCGGATACA    349

BSNT_06270___    350 ACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGAT    399
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_037990__    350 ACGAAGGAAACAGCGGCGGAGGCCAATACTTTGGCGGAGGCCAAAATGAT    399

BSNT_06270___    400 AATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAG    449
                     |||||.||.||.||||||||.||||||||||||||.|||||.||||||||
RBAM_037990__    400 AATCCGTTCGGCGGAAATCAGAACAACCAGAGACGAAATCAAGGGAACAG    449

BSNT_06270___    450 CTTTAATGATGACCCATTTGCCAACGACGGCAAACCGATTGACATCTCGG    499
                     ||||||||||||.||||||||||||||||||||.||||||||||||||||
RBAM_037990__    450 CTTTAATGATGATCCATTTGCCAACGACGGCAAGCCGATTGACATCTCGG    499

BSNT_06270___    500 ATGATGATCTTCCATTCTAA    519
                     |||||||||||||.||||||
RBAM_037990__    500 ATGATGATCTTCCGTTCTAA    519


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