Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00351 and RBAM_037970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence dna-align/BSNT_00351___adaA.1.9828.seq
# -bsequence dna-align/RBAM_037970___adaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00351___adaA-RBAM_037970___adaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00351___adaA-RBAM_037970___adaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00351___adaA
# 2: RBAM_037970___adaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 694
# Identity: 386/694 (55.6%)
# Similarity: 386/694 (55.6%)
# Gaps: 170/694 (24.5%)
# Score: 991.5
#
#
#=======================================
BSNT_00351___ 1 ATGCCGGATAGTATCAATAACGGACATAAAGAGAGCCATGAGCATAGAAT 50
||.||
RBAM_037970__ 1 -------------------------------------------ATGGA-- 5
BSNT_00351___ 51 TTCGAATGATGCAGAAATGA---TAACAGATGAAAAGTGGCAAGCCATTA 97
||..|| ||||||| | |.||.|||||||.||||...||.||.|
RBAM_037970__ 6 ---GACAGA--CAGAAAT-ATCCTGACTGATGAAAGGTGGAGCGCAATCA 49
BSNT_00351___ 98 TAAATAATGATGCAGCGTACAATAATCA------ATTTTTCTACGCTGTA 141
||.|.||||||||..| |.||.| |||||..||.||.|||
RBAM_037970__ 50 TACACAATGATGCTTC------TTATGACGGGGCATTTTATTATGCAGTA 93
BSNT_00351___ 142 AAATCGACAGGGATATTCTGTAAACCATCCTGTAAATCTCGCGTTCCGAA 191
|||.||||.|||||.||||||...||.||.||||||||..|.||||||||
RBAM_037970__ 94 AAAACGACGGGGATTTTCTGTCGGCCTTCTTGTAAATCGAGAGTTCCGAA 143
BSNT_00351___ 192 AAAAGAAAA--TGTATGTATTTTTCCAAAC-GCAGAACAAGCTCTCCGCG 238
.|||||||| ||...||.||| .|.|| ||.||...|||.|| ||.|
RBAM_037970__ 144 TAAAGAAAACGTGCTGGTGTTT---GATACGGCTGATGCAGCGCT-CGAG 189
BSNT_00351___ 239 -CAAATTTTCGCCCTTGTAAACGTTGCAAGCC---------------TAC 272
.|.|||||||.||.||||||.|.|||..||| |.|
RBAM_037970__ 190 AGACATTTTCGACCCTGTAAAAGGTGCCGGCCGAACGGTCTTCGTCTTCC 239
BSNT_00351___ 273 TAATGAAAAAATGCCTGATAGCGAGTGGGTTGATCTAATTACTGAATACA 322
|.||||| ||.|||.|||.||.|||.|||||.||||
RBAM_037970__ 240 TGATGAA---------------GAATGGATTGCTCAAATCACTGAGTACA 274
BSNT_00351___ 323 TTGATAAAAATT-TCACAGAAAAATTAACGCT-AGAATCG--TTAGCAGA 368
||||.....||| |||| |||....|.||.|| || || ||.||.||
RBAM_037970__ 275 TTGACCGCCATTATCAC-GAATCCCTGACTCTGAG---CGTATTGGCCGA 320
BSNT_00351___ 369 TATTTGTCATGGGAGTCCGTATCATATGCATCGAACATTTAAAAAGATTA 418
.||.|||||.||.||.||.||||||.|.||.||.|||||||||||.||.|
RBAM_037970__ 321 AATGTGTCACGGCAGCCCCTATCATTTACAGCGGACATTTAAAAAAATCA 370
BSNT_00351___ 419 AAGGCATTACCCTGGTTGAGTATATACAACAAGTTAGAGT----ACACGC 464
..||.||..|||.|.|||.|||||||||..||.|.|||.| | |.||
RBAM_037970__ 371 GGGGAATATCCCCGATTGCGTATATACAGAAAATAAGATTGTCGA-AGGC 419
BSNT_00351___ 465 GGCTAAAAAGTA---TTTGATTCAGACAAATA----AATCGATTGGAGAT 507
|| ||.| |||.|..||.||..||| |.|| .|||||
RBAM_037970__ 420 GG------AGCACCTTTTAAAGCATACTGATATGACAGTC--ATGGAG-- 459
BSNT_00351___ 508 ATCGCTATATGTGTGGGTATAGCTAAC---GCGCCTTATTTTATTACTTT 554
||||||.|...|||.||.||..|.||| |||| ||||....||..|
RBAM_037970__ 460 ATCGCTCTGACTGTCGGAATTCCAAACACAGCGC---ATTTCGCGACCCT 506
BSNT_00351___ 555 ATTTAAAAAGAAAACTGG----------ACAGACACCAGCACAATTTC-G 593
.||||||||||.|||.|| |||||...|||.|.|| | |
RBAM_037970__ 507 TTTTAAAAAGAGAACCGGGAGTTCGCCCACAGAATACAGAAAAA---CAG 553
BSNT_00351___ 594 TCAA-ATGAGTAAAATGGAGGAAACGTACAATGGAAACAAATAA 636
.||| |||.| |.|.|||| ||.|||| ||.|
RBAM_037970__ 554 CCAAGATGGG--ACAGGGAG-----GTTCAAT--------ATGA 582
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