Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06247 and RBAM_037800

See Amino acid alignment / Visit BSNT_06247 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence dna-align/BSNT_06247___yyaT.1.9828.seq
#    -bsequence dna-align/RBAM_037800___yyaT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06247___yyaT
# 2: RBAM_037800___yyaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity:     350/448 (78.1%)
# Similarity:   350/448 (78.1%)
# Gaps:          17/448 ( 3.8%)
# Score: 1379.5
# 
#
#=======================================

BSNT_06247___      1 ATGAATATAAAAAGAATAACAACTGAAGCTGATTTACATGAAGC-TTTGA     49
                     |||||.|||||||||||||||||.|||..||||||.||.|.||| .||| 
RBAM_037800__      1 ATGAAGATAAAAAGAATAACAACGGAAATTGATTTGCAAGCAGCGCTTG-     49

BSNT_06247___     50 ATATTAGAAAGACGGTTTTCATTGAGGAGCAACATGTATCGGAATCCGAA     99
                     |.||||||||..|.||.|||||||||||.||.||.|||.|.|||.||||.
RBAM_037800__     50 AGATTAGAAAAGCAGTATTCATTGAGGAACAGCAAGTACCTGAAGCCGAT     99

BSNT_06247___    100 GAGTTCGATGAATTTGATACGCTCCAGGAACAATGCCAGCATGTCTTGGT    149
                     ||.||.|||.|.||.||||||||..||||.||.|||..||||||||||||
RBAM_037800__    100 GAATTTGATCAGTTCGATACGCTTGAGGATCAGTGCGGGCATGTCTTGGT    149

BSNT_06247___    150 ATATCATGAGAATCAGCCTGTCGGCACGGGCCGTGTGCGCATCGTTGGCC    199
                     .|.||||||.||||||||||.||||||.||.||.||.|||||.||...||
RBAM_037800__    150 TTTTCATGAAAATCAGCCTGCCGGCACAGGACGCGTCCGCATTGTAAACC    199

BSNT_06247___    200 ATACAGCAAAGCTGGAAAGAATCTGCATCCTAAAACCTTACCGTAAGTAC    249
                     ||||||..|||||.|||.|||||||||||||.||.||||||||.||.|||
RBAM_037800__    200 ATACAGGCAAGCTCGAACGAATCTGCATCCTGAAGCCTTACCGCAAATAC    249

BSNT_06247___    250 GGATTGGGGAAAGTCATCGTAAGCGGGTTAGAAGAAATCATAAAAGAAAA    299
                     ||.|||||.|||||||||.||||||..||||||.|.||..||||||||||
RBAM_037800__    250 GGGTTGGGCAAAGTCATCATAAGCGAATTAGAAAACATGGTAAAAGAAAA    299

BSNT_06247___    300 AGGATTGACTGCATGTAAGCTGCATGGTCAAACACAAGCAGCAGGCTTTT    349
                     |||..|.||...||||||.||||||||.||||||||.||.|.||||||||
RBAM_037800__    300 AGGCATCACCCAATGTAAACTGCATGGACAAACACATGCGGAAGGCTTTT    349

BSNT_06247___    350 ATCAAAAACTGGGCTACCAGATTTCTTCACAGGCATTTATGGAAGACGGC    399
                     ||||.|||||||||||.||||....|||||.||.||||||||||||||||
RBAM_037800__    350 ATCACAAACTGGGCTATCAGACAGATTCACCGGAATTTATGGAAGACGGC    399

BSNT_06247___    400 ATCCCTCATGTCTTGATGACAAAAGACATATCGCGGAATATAACATGA    447
                     |||||.||||||||||||||||||||      ||.|         |||
RBAM_037800__    400 ATCCCGCATGTCTTGATGACAAAAGA------GCTG---------TGA    432


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