Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00978 and RBAM_037760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence dna-align/BSNT_00978___ydgI.1.9828.seq
# -bsequence dna-align/RBAM_037760___ydgI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00978___ydgI-RBAM_037760___ydgI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00978___ydgI-RBAM_037760___ydgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00978___ydgI
# 2: RBAM_037760___ydgI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 539/639 (84.4%)
# Similarity: 539/639 (84.4%)
# Gaps: 9/639 ( 1.4%)
# Score: 2317.0
#
#
#=======================================
BSNT_00978___ 1 ATGA---------TCAAAACAAACGATTTTATGGAAATTATGAAAGGCCG 41
|||| |.|||||||||||.||||||||.||||||||||||||
RBAM_037760__ 1 ATGAAAACAGAACTGAAAACAAACGACTTTATGGACATTATGAAAGGCCG 50
BSNT_00978___ 42 CCGTTCTATCCGCAACTATGATCCGGCAGTAAAAATCAGCAAAGAAGAAA 91
||||||.||.||.||.||.||||||||.||.|||||||||||||||||||
RBAM_037760__ 51 CCGTTCCATTCGGAATTACGATCCGGCTGTTAAAATCAGCAAAGAAGAAA 100
BSNT_00978___ 92 TGACAGAGATCTTAGAGGAAGCAACAACTGCCCCATCTTCTGTTAACGCG 141
||||..|.|||.|.||.||||||||.||.||.||.|||||.||.||||||
RBAM_037760__ 101 TGACTCAAATCCTGGAAGAAGCAACGACAGCGCCGTCTTCAGTCAACGCG 150
BSNT_00978___ 142 CAGCCATGGCGTTTTCTTGTCATTGACAGCCCGGAAGGAAAAGAAAAGCT 191
|||||.|||||||||||.||||||||||||||.||||||||||||||.||
RBAM_037760__ 151 CAGCCGTGGCGTTTTCTCGTCATTGACAGCCCTGAAGGAAAAGAAAAACT 200
BSNT_00978___ 192 CGCACCGCTTGCAAGCTTTAACCAAACACAGGTCACAACATCATCTGCTG 241
|||.||||||||.|||||||||||||||||.||||..|||||||||||.|
RBAM_037760__ 201 CGCGCCGCTTGCCAGCTTTAACCAAACACAAGTCAGCACATCATCTGCGG 250
BSNT_00978___ 242 TCATCGCTGTATTTGCAGACATGAACAATGCAGACTACTTAGAAGAAATC 291
|.|||||.||.||.|||||.|||||||.||..|||||.|||||||||||.
RBAM_037760__ 251 TGATCGCGGTTTTCGCAGATATGAACAGTGATGACTATTTAGAAGAAATT 300
BSNT_00978___ 292 TATTCAAAAGCCGTGGAACTTGGTTACATGCCGCAGGAGGTCAAAGACAG 341
|||||||||||.||.|||||.||.||||||||||||||.||.||||||||
RBAM_037760__ 301 TATTCAAAAGCGGTCGAACTGGGCTACATGCCGCAGGAAGTAAAAGACAG 350
BSNT_00978___ 342 ACAAATCGCCGCGCTGACCGCACATTTTGAAAAGCTTCCGGCACAGGTCA 391
|||||||||.|||.||||.||.|||||||||||.||.||||..||.||.|
RBAM_037760__ 351 ACAAATCGCTGCGTTGACGGCGCATTTTGAAAAACTGCCGGAGCAAGTGA 400
BSNT_00978___ 392 ACCGTGAAACGATCCTGATTGATGGAGGTCTTGTTTCCATGCAGCTGATG 441
|||||||||||||.||||||||.|||||.||.||||||||||||||||||
RBAM_037760__ 401 ACCGTGAAACGATTCTGATTGACGGAGGACTCGTTTCCATGCAGCTGATG 450
BSNT_00978___ 442 CTGACTGCACGCGCGCATGGCTACGATACAAACCCGATCGGCGGATACGA 491
||.||.|||||||||||.|||||.||.|||||||||||||||||.|||||
RBAM_037760__ 451 CTTACGGCACGCGCGCACGGCTATGACACAAACCCGATCGGCGGCTACGA 500
BSNT_00978___ 492 TAAAGAAAACATCGCGGAAACCTTCGGATTAGATAAAGAACGTTATGTAC 541
|||||||||.||.||.||....||||||.|.||||||||.||||||||||
RBAM_037760__ 501 TAAAGAAAAGATTGCCGAGGTTTTCGGAATGGATAAAGAGCGTTATGTAC 550
BSNT_00978___ 542 CGGTTATGCTACTTTCTATCGGAAAAGCAGCAGACGAAGGCTATGCTTCC 591
||||.|||||..|.||.|||||||||||.|||||||||||.|||||||||
RBAM_037760__ 551 CGGTCATGCTGTTATCAATCGGAAAAGCGGCAGACGAAGGATATGCTTCC 600
BSNT_00978___ 592 TACCGTCTGCCGATTGATACAATTGCAGAATGGAAATAA 630
||||||||.||.||.||.|||||.|||.|||||||||||
RBAM_037760__ 601 TACCGTCTTCCTATCGAAACAATCGCACAATGGAAATAA 639
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