Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00972 and RBAM_037680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence dna-align/BSNT_00972___dinB.1.9828.seq
# -bsequence dna-align/RBAM_037680___dinB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00972___dinB-RBAM_037680___dinB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00972___dinB-RBAM_037680___dinB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00972___dinB
# 2: RBAM_037680___dinB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity: 369/530 (69.6%)
# Similarity: 369/530 (69.6%)
# Gaps: 31/530 ( 5.8%)
# Score: 1186.0
#
#
#=======================================
BSNT_00972___ 1 ATGTCAGATTTTGCATTCAAATTGTATGAATATAACGTCTGGGCCAATCA 50
.||..|.||.|.|||.|..||||||||||.|||.|..|.|||||.|||||
RBAM_037680__ 1 GTGGGACATCTGGCACTGCAATTGTATGATTATCATCTTTGGGCAAATCA 50
BSNT_00972___ 51 ACAAATATTCAACCGATTAAAAGAGCTTCCAAAAGAGGTATACCATCAAG 100
.||||||||||.|||..|.|||||||||||..|.||.||.||||.|.|.|
RBAM_037680__ 51 GCAAATATTCACCCGGCTTAAAGAGCTTCCGGAGGATGTGTACCGTAAGG 100
BSNT_00972___ 101 AAATTCAAAGCGTGTTTCCGTCAATATCCCATGTATTGTCTCATGTTTAT 150
|.||||||||.||.||||||||.|||.||..|||||||.|||||||.|||
RBAM_037680__ 101 AGATTCAAAGTGTCTTTCCGTCGATAGCCGGTGTATTGACTCATGTGTAT 150
BSNT_00972___ 151 CTTTCTGATCTCGGCTGGATTGAAGTGTTTTCCGGCAAAAC--CTTGAGC 198
||.||.|||...||.|||.||||.|||||.||||| |.|.| ||.|||
RBAM_037680__ 151 CTGTCGGATAAGGGGTGGTTTGATGTGTTCTCCGG-AGAGCGTCTGGAG- 198
BSNT_00972___ 199 GATGCGTTGGCTTTAGCTGAACAGCTTAAAGAACAGACA--GAGGCTAAA 246
|||.||.||...|.|||||||||||..||||| .|||| ..|.|||||
RBAM_037680__ 199 GATACGCTGAAATCAGCTGAACAGCAAAAAGA--GGACATCTTGTCTAAA 246
BSNT_00972___ 247 GAAATAGAGGAAATGGAAGACCTTTTTCTGAGGTTATCCGAGCGCTATAT 296
||.|||||.||..|||||||..|.|||.||...|||||.||.||.|||..
RBAM_037680__ 247 GAGATAGAAGAGCTGGAAGATATGTTTTTGGAATTATCAGACCGATATCA 296
BSNT_00972___ 297 ACTATTTTTACAGCAAA---AAGAACAGCTCAATAAGCCACTCCAGATTC 343
|.||||||| ||||| |||||.|..|||.|...||.||..|.||..
RBAM_037680__ 297 ATTATTTTT---GCAAAAGGAAGAAAATATCAGTCTCCCCCTTGAAATAG 343
BSNT_00972___ 344 AGAATCCCTCAAGCGGAATCATGAAAACAACTGTTTCCGAACTGCTTCCC 393
||.||||.|||.|.|..|||||||||||..|.|...||||..||.|.|.|
RBAM_037680__ 344 AGCATCCGTCAGGTGACATCATGAAAACCGCAGCAGCCGATATGATCCTC 393
BSNT_00972___ 394 CACGTTGTCAACCACGGGACATACCACCGCGGCAATATCACAGCAATGCT 443
||.|||||.||||||||.||.||.||.|||||.|||||.|||||.|||||
RBAM_037680__ 394 CATGTTGTGAACCACGGAACGTATCATCGCGGGAATATAACAGCCATGCT 443
BSNT_00972___ 444 GCGGCAGGCA----GGCTACGCATCCGCACCGACAGATTACGGGCTCTAC 489
|||.|| ||.||.||.||.|..|||||.|||||||| ||.
RBAM_037680__ 444 ----CAGACAGATGGGGTATGCTTCTGTGCCGACGGATTACGG----TAT 485
BSNT_00972___ 490 CTGTTTATGAAAAAAACTGAAAAAGCATAA 519
.|.||||| |.|.|||| |||||| |||
RBAM_037680__ 486 GTATTTAT-ATATAAAC--AAAAAG--TAA 510
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