Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00972 and RBAM_037680

See Amino acid alignment / Visit BSNT_00972 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence dna-align/BSNT_00972___dinB.1.9828.seq
#    -bsequence dna-align/RBAM_037680___dinB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00972___dinB-RBAM_037680___dinB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00972___dinB-RBAM_037680___dinB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00972___dinB
# 2: RBAM_037680___dinB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity:     369/530 (69.6%)
# Similarity:   369/530 (69.6%)
# Gaps:          31/530 ( 5.8%)
# Score: 1186.0
# 
#
#=======================================

BSNT_00972___      1 ATGTCAGATTTTGCATTCAAATTGTATGAATATAACGTCTGGGCCAATCA     50
                     .||..|.||.|.|||.|..||||||||||.|||.|..|.|||||.|||||
RBAM_037680__      1 GTGGGACATCTGGCACTGCAATTGTATGATTATCATCTTTGGGCAAATCA     50

BSNT_00972___     51 ACAAATATTCAACCGATTAAAAGAGCTTCCAAAAGAGGTATACCATCAAG    100
                     .||||||||||.|||..|.|||||||||||..|.||.||.||||.|.|.|
RBAM_037680__     51 GCAAATATTCACCCGGCTTAAAGAGCTTCCGGAGGATGTGTACCGTAAGG    100

BSNT_00972___    101 AAATTCAAAGCGTGTTTCCGTCAATATCCCATGTATTGTCTCATGTTTAT    150
                     |.||||||||.||.||||||||.|||.||..|||||||.|||||||.|||
RBAM_037680__    101 AGATTCAAAGTGTCTTTCCGTCGATAGCCGGTGTATTGACTCATGTGTAT    150

BSNT_00972___    151 CTTTCTGATCTCGGCTGGATTGAAGTGTTTTCCGGCAAAAC--CTTGAGC    198
                     ||.||.|||...||.|||.||||.|||||.||||| |.|.|  ||.||| 
RBAM_037680__    151 CTGTCGGATAAGGGGTGGTTTGATGTGTTCTCCGG-AGAGCGTCTGGAG-    198

BSNT_00972___    199 GATGCGTTGGCTTTAGCTGAACAGCTTAAAGAACAGACA--GAGGCTAAA    246
                     |||.||.||...|.|||||||||||..|||||  .||||  ..|.|||||
RBAM_037680__    199 GATACGCTGAAATCAGCTGAACAGCAAAAAGA--GGACATCTTGTCTAAA    246

BSNT_00972___    247 GAAATAGAGGAAATGGAAGACCTTTTTCTGAGGTTATCCGAGCGCTATAT    296
                     ||.|||||.||..|||||||..|.|||.||...|||||.||.||.|||..
RBAM_037680__    247 GAGATAGAAGAGCTGGAAGATATGTTTTTGGAATTATCAGACCGATATCA    296

BSNT_00972___    297 ACTATTTTTACAGCAAA---AAGAACAGCTCAATAAGCCACTCCAGATTC    343
                     |.|||||||   |||||   |||||.|..|||.|...||.||..|.||..
RBAM_037680__    297 ATTATTTTT---GCAAAAGGAAGAAAATATCAGTCTCCCCCTTGAAATAG    343

BSNT_00972___    344 AGAATCCCTCAAGCGGAATCATGAAAACAACTGTTTCCGAACTGCTTCCC    393
                     ||.||||.|||.|.|..|||||||||||..|.|...||||..||.|.|.|
RBAM_037680__    344 AGCATCCGTCAGGTGACATCATGAAAACCGCAGCAGCCGATATGATCCTC    393

BSNT_00972___    394 CACGTTGTCAACCACGGGACATACCACCGCGGCAATATCACAGCAATGCT    443
                     ||.|||||.||||||||.||.||.||.|||||.|||||.|||||.|||||
RBAM_037680__    394 CATGTTGTGAACCACGGAACGTATCATCGCGGGAATATAACAGCCATGCT    443

BSNT_00972___    444 GCGGCAGGCA----GGCTACGCATCCGCACCGACAGATTACGGGCTCTAC    489
                         |||.||    ||.||.||.||.|..|||||.||||||||    ||.
RBAM_037680__    444 ----CAGACAGATGGGGTATGCTTCTGTGCCGACGGATTACGG----TAT    485

BSNT_00972___    490 CTGTTTATGAAAAAAACTGAAAAAGCATAA    519
                     .|.||||| |.|.||||  ||||||  |||
RBAM_037680__    486 GTATTTAT-ATATAAAC--AAAAAG--TAA    510


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