Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05203 and RBAM_037650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence dna-align/BSNT_05203___sacB.1.9828.seq
# -bsequence dna-align/RBAM_037650___sacB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05203___sacB-RBAM_037650___sacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05203___sacB-RBAM_037650___sacB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05203___sacB
# 2: RBAM_037650___sacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1427
# Identity: 1188/1427 (83.3%)
# Similarity: 1188/1427 (83.3%)
# Gaps: 10/1427 ( 0.7%)
# Score: 4971.5
#
#
#=======================================
BSNT_05203___ 1 ATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTGACCTTTACTAC 50
||||||||||||||.||||||||||.|||.|||||..|.||.||.||.||
RBAM_037650__ 1 ATGAACATCAAAAAATTTGCAAAACGAGCCACAGTTCTAACTTTCACGAC 50
BSNT_05203___ 51 TGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAAGAAACAAACC 100
||||||.||||||||.||.||.||||||||.||.||||||||||..|.||
RBAM_037650__ 51 TGCACTTCTGGCAGGGGGAGCGACTCAAGCCTTCGCGAAAGAAAATACCC 100
BSNT_05203___ 101 AAAAGCCATATAAGGAAACGTACGGCATTTCCCATATTACACGCCATGAC 150
||||.||.||.||.||||||||||||.|.||.||.||.|||||||||||.
RBAM_037650__ 101 AAAAACCTTACAAAGAAACGTACGGCGTCTCTCACATCACACGCCATGAT 150
BSNT_05203___ 151 ATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATCAAGTGCCTGA 200
||||||||.||||||.|||||||..|||.|||||||||.|||||||||.|
RBAM_037650__ 151 ATGCTGCAGATCCCTAAACAGCAGCAAAGTGAAAAATACCAAGTGCCTCA 200
BSNT_05203___ 201 ATTCGATCCGTCCACAATTAAAAATATCTCTTCTGCAAAAGGCCTGGACG 250
||||||.|..||.|||||||||||||||...||.||||||||.|||||.|
RBAM_037650__ 201 ATTCGACCAATCAACAATTAAAAATATCGAGTCCGCAAAAGGACTGGATG 250
BSNT_05203___ 251 TTTGGGACAGCTGGCCATTACAAAACGCTGATGGCACAGTCGCAAACTAT 300
|.||||||||||||||..|.|||||||||||.||.|||||.||..|.||.
RBAM_037650__ 251 TGTGGGACAGCTGGCCGCTCCAAAACGCTGACGGAACAGTAGCTGAATAC 300
BSNT_05203___ 301 CACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTAAAAATGCGGA 350
.|||||||.|||.||||.|||||..|.||.|||...||.|||.|.||.||
RBAM_037650__ 301 AACGGCTATCACGTCGTGTTTGCTCTTGCTGGAAGCCCGAAAGACGCTGA 350
BSNT_05203___ 351 TGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGA-AACTTCTATT 399
|||||||||.||.||||||||.||||||||||||||||| ||| ||.||.
RBAM_037650__ 351 TGACACATCCATCTACATGTTTTATCAAAAAGTCGGCGACAAC-TCGATC 399
BSNT_05203___ 400 GACAGCTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCGACAAATTCGA 449
|||||||||||||||||.|||||.|||||||||||||||||.||.|||||
RBAM_037650__ 400 GACAGCTGGAAAAACGCGGGCCGTGTCTTTAAAGACAGCGATAAGTTCGA 449
BSNT_05203___ 450 TGCAAATGATTCTATCCTAAAAGACCAAACGCAAGAATGGTCAGGTTCAG 499
.||.||.|||...|||||.|||||.||.||.|||||||||||.|||||.|
RBAM_037650__ 450 CGCCAACGATGAAATCCTGAAAGAACAGACACAAGAATGGTCCGGTTCTG 499
BSNT_05203___ 500 CCACATTTACATCTGACGGAAAAATCCGTTTATTCTATACTGATTTCTCC 549
|.||.||||||||||||||||||||||||||||||||.|||||.||.|||
RBAM_037650__ 500 CAACCTTTACATCTGACGGAAAAATCCGTTTATTCTACACTGACTTTTCC 549
BSNT_05203___ 550 GGTAAACATTACGGCAAACAAACACTGACAACTGCACAGGTTAACGTATC 599
||||.|||||||||||||||||..||||||||.||.|||||.||.||.||
RBAM_037650__ 550 GGTACACATTACGGCAAACAAAGCCTGACAACGGCGCAGGTAAATGTGTC 599
BSNT_05203___ 600 AGCATC---AGACA-GCTCTTTGAACATCAACGGTGTAGAGGATTATAAA 645
|..||| .|||| |||| ||.||||||||.||.||.|||.|||||
RBAM_037650__ 600 AAAATCTGATGACACGCTC----AAGATCAACGGAGTGGAAGATCATAAA 645
BSNT_05203___ 646 TCAATCTTTGACGGTGACGGCAAAACGTATCAAAATGTACAGCAGTTCAT 695
.|.||.||||||||||||||.|||||.||||||||.||.||||||||.||
RBAM_037650__ 646 ACGATTTTTGACGGTGACGGAAAAACATATCAAAACGTTCAGCAGTTTAT 695
BSNT_05203___ 696 CGATGAAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTC 745
|||||||||.|||||.|..||.|||||||||||||||||||||||.||||
RBAM_037650__ 696 CGATGAAGGGAACTATACATCCGGCGACAACCATACGCTGAGAGACCCTC 745
BSNT_05203___ 746 ACTACGTAGAAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACT 795
|||||||.|||||.||||||||.||||||.|.|||||.|||||.||||||
RBAM_037650__ 746 ACTACGTTGAAGACAAAGGCCATAAATACCTTGTATTCGAAGCCAACACT 795
BSNT_05203___ 796 GGAACTGAAGATGGCTACCAAGGCGAAGAATCTTTATTTAACAAAGCATA 845
|||||.||..|.||.||||||||||||||||||||||||||||||||.||
RBAM_037650__ 796 GGAACAGATAACGGATACCAAGGCGAAGAATCTTTATTTAACAAAGCGTA 845
BSNT_05203___ 846 CTATGGCAAAAGCACATCGTTCTTCCGTCAAGAAAGTCAAAAACTTCTGC 895
|||.|||...||||||...|||||||||.||||||||||.||.||||.||
RBAM_037650__ 846 CTACGGCGGCAGCACAAACTTCTTCCGTAAAGAAAGTCAGAAGCTTCAGC 895
BSNT_05203___ 896 AAAGCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCGCCCTCGGCATG 945
||||.|.||||||||||...|||||.|||||.||.|||||||||||.|||
RBAM_037650__ 896 AAAGTGCTAAAAAACGCGATGCTGAATTAGCGAATGGCGCCCTCGGTATG 945
BSNT_05203___ 946 ATTGAGCTAAACGATGACTACACACTGAAAAAAGTGATGAAACCGCTGAT 995
.|.|||.||||||||||.||||||.||||||||||.|||||.||||||||
RBAM_037650__ 946 GTAGAGTTAAACGATGATTACACATTGAAAAAAGTCATGAAGCCGCTGAT 995
BSNT_05203___ 996 TGCATCTAACACAGTAACAGATGAAATTGAACGCGCGAACGTCTTTAAAA 1045
|.|.||.||.||.||||||||||||||.||.||||||||.||.||.||||
RBAM_037650__ 996 TACTTCAAATACGGTAACAGATGAAATCGAGCGCGCGAATGTTTTCAAAA 1045
BSNT_05203___ 1046 TGAACGGCAAATGGTACCTGTTCACTGACTCCCGCGGATCAAAAATGACG 1095
||||||||||||||||||||||||||||.||.|||||.||||||||||||
RBAM_037650__ 1046 TGAACGGCAAATGGTACCTGTTCACTGATTCACGCGGTTCAAAAATGACG 1095
BSNT_05203___ 1096 ATTGACGGCATTACGTCTAACGATATTTACATGCTTGGTTATGTTTCTAA 1145
||.|||||.||||..||.||||||||||||||||||||||||||.||.||
RBAM_037650__ 1096 ATCGACGGTATTAACTCAAACGATATTTACATGCTTGGTTATGTATCAAA 1145
BSNT_05203___ 1146 TTCTTTAACTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAA 1195
.||||||||.||.||.|||||||||||||||||||||||.|||||..|..
RBAM_037650__ 1146 CTCTTTAACAGGTCCTTACAAGCCGCTGAACAAAACTGGTCTTGTACTGC 1195
BSNT_05203___ 1196 AAATGGATCTTGATCCTAACGATGTAACCTTTACTTACTCACACTTCGCT 1245
||||||.||||||.||||||||||||||.||.||||||||.||||||||.
RBAM_037650__ 1196 AAATGGGTCTTGACCCTAACGATGTAACGTTCACTTACTCTCACTTCGCA 1245
BSNT_05203___ 1246 GTACCTCAAGCGAAAGGAAACAATGTCGTGATTACAAGCTATATGACAAA 1295
||.||.|||||.|||||.||||||||||||||.||||||||.||||||||
RBAM_037650__ 1246 GTGCCGCAAGCCAAAGGCAACAATGTCGTGATCACAAGCTACATGACAAA 1295
BSNT_05203___ 1296 CAGAGGGTTCTACGCAGACAAACAATCAACGTTTGCGCCAAGCTTCCTGC 1345
||||||.||||..|..||.|||.|..||||.|||||||||||||||.|..
RBAM_037650__ 1296 CAGAGGCTTCTTTGAGGATAAAAAGGCAACATTTGCGCCAAGCTTCTTAA 1345
BSNT_05203___ 1346 TGAACATCAAAGGCAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAA 1395
|||||||||||||||||||||||||.|||||.|||.||||||||||||||
RBAM_037650__ 1346 TGAACATCAAAGGCAAGAAAACATCCGTTGTTAAAAACAGCATCCTTGAA 1395
BSNT_05203___ 1396 CAAGGACAATTAACAGTTAACAAATAA 1422
||||||||..|.||.||||||||.|||
RBAM_037650__ 1396 CAAGGACAGCTTACGGTTAACAACTAA 1422
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