Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06232 and RBAM_037630

See Amino acid alignment / Visit BSNT_06232 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence dna-align/BSNT_06232___ppaC.1.9828.seq
#    -bsequence dna-align/RBAM_037630___ppaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06232___ppaC-RBAM_037630___ppaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06232___ppaC-RBAM_037630___ppaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: RBAM_037630___ppaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     803/930 (86.3%)
# Similarity:   803/930 (86.3%)
# Gaps:           0/930 ( 0.0%)
# Score: 3507.0
# 
#
#=======================================

BSNT_06232___      1 ATGGAAAAGATACTTATTTTCGGACACCAAAACCCAGACACAGATACGAT     50
                     ||||||||.||.||||||||||||||.||||||||||||||||||||.||
RBAM_037630__      1 ATGGAAAAAATTCTTATTTTCGGACATCAAAACCCAGACACAGATACCAT     50

BSNT_06232___     51 TTGTTCTGCGATCGCTTATGCTGATTTGAAAAACAAACTCGGCTTCAATG    100
                     |||.|||||.||.||.||.||||||.|.|||||.||||||||||||||||
RBAM_037630__     51 TTGCTCTGCCATTGCCTACGCTGATCTAAAAAATAAACTCGGCTTCAATG    100

BSNT_06232___    101 CTGAGCCTGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_037630__    101 CTGAGCCCGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT    150

BSNT_06232___    151 GACTATTTCAAACAAGAAAGCCCGCGTCTTGTTGAAACAGCTGCAAACGA    200
                     ||.||||||||.||.||||||||||||.|.||.||||||||.||||||||
RBAM_037630__    151 GATTATTTCAAGCAGGAAAGCCCGCGTTTGGTGGAAACAGCCGCAAACGA    200

BSNT_06232___    201 AGTAAACGGCGTTATCCTGGTTGACCATAACGAACGCCAGCAAAGCATCA    250
                     ||||||||||||.|||||.||||||||.||.|||||||||||||||||||
RBAM_037630__    201 AGTAAACGGCGTCATCCTTGTTGACCACAATGAACGCCAGCAAAGCATCA    250

BSNT_06232___    251 AAGACATTGAAGAGGTTCAGGTTTTAGAGGTTATCGACCATCACCGCATC    300
                     |.||.||.|||||.|||||||||.|.||.|||||||||||.|||||.|||
RBAM_037630__    251 AGGATATCGAAGACGTTCAGGTTCTTGAAGTTATCGACCACCACCGTATC    300

BSNT_06232___    301 GCTAACTTTGAAACAGCTGAGCCGCTTTACTATCGTGCTGAGCCTGTAGG    350
                     ||.|||||.||||||||.||.||.||||||||.|||||||||||.||.||
RBAM_037630__    301 GCCAACTTCGAAACAGCGGAACCTCTTTACTACCGTGCTGAGCCGGTCGG    350

BSNT_06232___    351 CTGTACGGCTACCATCTTAAACAAAATGTACAAAGAGAATAACGTGAAAA    400
                     ||||||||||||.|||||||||||||||||||||||.|||||||||||||
RBAM_037630__    351 CTGTACGGCTACGATCTTAAACAAAATGTACAAAGAAAATAACGTGAAAA    400

BSNT_06232___    401 TCGAGAAAGAAATTGCCGGCCTTATGCTGTCTGCGATCATTTCTGATTCC    450
                     ||||||||||||||||.|||||.||||||||.||.||||||||.||.||.
RBAM_037630__    401 TCGAGAAAGAAATTGCGGGCCTCATGCTGTCAGCAATCATTTCCGACTCT    450

BSNT_06232___    451 CTGTTATTTAAATCTCCAACTTGCACGGACCAAGACGTAGCAGCAGCAAA    500
                     |||||||||||||||||.|||||||||||.|||||..|.|||||.|||||
RBAM_037630__    451 CTGTTATTTAAATCTCCGACTTGCACGGAGCAAGATATCGCAGCGGCAAA    500

BSNT_06232___    501 AGAGCTTGCGGAGATCGCTGGAGTAAATGCTGAAGAATACGGCTTGAACA    550
                     |||||||||.||.||.||.||.|||.||||.|||||.||||||||.||||
RBAM_037630__    501 AGAGCTTGCTGAAATTGCCGGCGTAGATGCGGAAGAGTACGGCTTAAACA    550

BSNT_06232___    551 TGCTGAAAGCAGGCGCTGATCTAAGCAAAAAAACAGTGGAAGAGCTCATT    600
                     ||||||||||.|||||.||..|||||||||||||.||||||||.||.|||
RBAM_037630__    551 TGCTGAAAGCGGGCGCCGACTTAAGCAAAAAAACTGTGGAAGAACTGATT    600

BSNT_06232___    601 TCTCTTGATGCGAAAGAATTTACACTCGGCAGCAAGAAAGTCGAAATCGC    650
                     |||||||||||||||||.||.||.|||||||||||.||||||||||||||
RBAM_037630__    601 TCTCTTGATGCGAAAGAGTTCACGCTCGGCAGCAAAAAAGTCGAAATCGC    650

BSNT_06232___    651 ACAAGTAAACACAGTGGACATTGAAGATGTAAAAAAACGCCAAGCTGAAT    700
                     .|||||.||||||||.||.|||||||||||.|||||.||.||..|.||||
RBAM_037630__    651 CCAAGTCAACACAGTTGATATTGAAGATGTTAAAAAGCGGCAGCCGGAAT    700

BSNT_06232___    701 TAGAAGCTGTGATCTCAAAAGTTGTGGCTGAGAAGAATCTTGATCTGTTC    750
                     |||||||.|...|.||||||||..|.|||||||||||.|||||.||||||
RBAM_037630__    701 TAGAAGCGGCTCTTTCAAAAGTAATTGCTGAGAAGAACCTTGACCTGTTC    750

BSNT_06232___    751 CTTCTCGTTATCACAGATATCTTAGAAAATGATTCACTTGCTCTTGCAAT    800
                     ||||||||.||.||.|||||..|.|||||.|||||.|||||.|||||.||
RBAM_037630__    751 CTTCTCGTGATTACGGATATTCTGGAAAACGATTCCCTTGCGCTTGCCAT    800

BSNT_06232___    801 CGGTAACGAAGCAGCGAAAGTGGAAAAAGCGTTCAACGTTACATTAGAAA    850
                     ||||.|..||||..|.||||||||||||||.||||||||.||.|||||||
RBAM_037630__    801 CGGTGATCAAGCGTCAAAAGTGGAAAAAGCATTCAACGTGACTTTAGAAA    850

BSNT_06232___    851 ACAACACAGCCCTCTTAAAAGGCGTTGTTTCCCGTAAAAAACAAGTCGTT    900
                     |||||||.||.||.|||||||||||.||.|||.|.||.||||||||||||
RBAM_037630__    851 ACAACACGGCTCTTTTAAAAGGCGTCGTATCCAGAAAGAAACAAGTCGTT    900

BSNT_06232___    901 CCTGTCTTAACAGACGCAATGGCTGAATAA    930
                     |||||.|||||||||||.||.||.||||||
RBAM_037630__    901 CCTGTTTTAACAGACGCGATTGCAGAATAA    930


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