Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06232 and RBAM_037630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06232___ppaC.1.9828.seq
# -bsequence dna-align/RBAM_037630___ppaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06232___ppaC-RBAM_037630___ppaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06232___ppaC-RBAM_037630___ppaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: RBAM_037630___ppaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity: 803/930 (86.3%)
# Similarity: 803/930 (86.3%)
# Gaps: 0/930 ( 0.0%)
# Score: 3507.0
#
#
#=======================================
BSNT_06232___ 1 ATGGAAAAGATACTTATTTTCGGACACCAAAACCCAGACACAGATACGAT 50
||||||||.||.||||||||||||||.||||||||||||||||||||.||
RBAM_037630__ 1 ATGGAAAAAATTCTTATTTTCGGACATCAAAACCCAGACACAGATACCAT 50
BSNT_06232___ 51 TTGTTCTGCGATCGCTTATGCTGATTTGAAAAACAAACTCGGCTTCAATG 100
|||.|||||.||.||.||.||||||.|.|||||.||||||||||||||||
RBAM_037630__ 51 TTGCTCTGCCATTGCCTACGCTGATCTAAAAAATAAACTCGGCTTCAATG 100
BSNT_06232___ 101 CTGAGCCTGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT 150
|||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_037630__ 101 CTGAGCCCGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT 150
BSNT_06232___ 151 GACTATTTCAAACAAGAAAGCCCGCGTCTTGTTGAAACAGCTGCAAACGA 200
||.||||||||.||.||||||||||||.|.||.||||||||.||||||||
RBAM_037630__ 151 GATTATTTCAAGCAGGAAAGCCCGCGTTTGGTGGAAACAGCCGCAAACGA 200
BSNT_06232___ 201 AGTAAACGGCGTTATCCTGGTTGACCATAACGAACGCCAGCAAAGCATCA 250
||||||||||||.|||||.||||||||.||.|||||||||||||||||||
RBAM_037630__ 201 AGTAAACGGCGTCATCCTTGTTGACCACAATGAACGCCAGCAAAGCATCA 250
BSNT_06232___ 251 AAGACATTGAAGAGGTTCAGGTTTTAGAGGTTATCGACCATCACCGCATC 300
|.||.||.|||||.|||||||||.|.||.|||||||||||.|||||.|||
RBAM_037630__ 251 AGGATATCGAAGACGTTCAGGTTCTTGAAGTTATCGACCACCACCGTATC 300
BSNT_06232___ 301 GCTAACTTTGAAACAGCTGAGCCGCTTTACTATCGTGCTGAGCCTGTAGG 350
||.|||||.||||||||.||.||.||||||||.|||||||||||.||.||
RBAM_037630__ 301 GCCAACTTCGAAACAGCGGAACCTCTTTACTACCGTGCTGAGCCGGTCGG 350
BSNT_06232___ 351 CTGTACGGCTACCATCTTAAACAAAATGTACAAAGAGAATAACGTGAAAA 400
||||||||||||.|||||||||||||||||||||||.|||||||||||||
RBAM_037630__ 351 CTGTACGGCTACGATCTTAAACAAAATGTACAAAGAAAATAACGTGAAAA 400
BSNT_06232___ 401 TCGAGAAAGAAATTGCCGGCCTTATGCTGTCTGCGATCATTTCTGATTCC 450
||||||||||||||||.|||||.||||||||.||.||||||||.||.||.
RBAM_037630__ 401 TCGAGAAAGAAATTGCGGGCCTCATGCTGTCAGCAATCATTTCCGACTCT 450
BSNT_06232___ 451 CTGTTATTTAAATCTCCAACTTGCACGGACCAAGACGTAGCAGCAGCAAA 500
|||||||||||||||||.|||||||||||.|||||..|.|||||.|||||
RBAM_037630__ 451 CTGTTATTTAAATCTCCGACTTGCACGGAGCAAGATATCGCAGCGGCAAA 500
BSNT_06232___ 501 AGAGCTTGCGGAGATCGCTGGAGTAAATGCTGAAGAATACGGCTTGAACA 550
|||||||||.||.||.||.||.|||.||||.|||||.||||||||.||||
RBAM_037630__ 501 AGAGCTTGCTGAAATTGCCGGCGTAGATGCGGAAGAGTACGGCTTAAACA 550
BSNT_06232___ 551 TGCTGAAAGCAGGCGCTGATCTAAGCAAAAAAACAGTGGAAGAGCTCATT 600
||||||||||.|||||.||..|||||||||||||.||||||||.||.|||
RBAM_037630__ 551 TGCTGAAAGCGGGCGCCGACTTAAGCAAAAAAACTGTGGAAGAACTGATT 600
BSNT_06232___ 601 TCTCTTGATGCGAAAGAATTTACACTCGGCAGCAAGAAAGTCGAAATCGC 650
|||||||||||||||||.||.||.|||||||||||.||||||||||||||
RBAM_037630__ 601 TCTCTTGATGCGAAAGAGTTCACGCTCGGCAGCAAAAAAGTCGAAATCGC 650
BSNT_06232___ 651 ACAAGTAAACACAGTGGACATTGAAGATGTAAAAAAACGCCAAGCTGAAT 700
.|||||.||||||||.||.|||||||||||.|||||.||.||..|.||||
RBAM_037630__ 651 CCAAGTCAACACAGTTGATATTGAAGATGTTAAAAAGCGGCAGCCGGAAT 700
BSNT_06232___ 701 TAGAAGCTGTGATCTCAAAAGTTGTGGCTGAGAAGAATCTTGATCTGTTC 750
|||||||.|...|.||||||||..|.|||||||||||.|||||.||||||
RBAM_037630__ 701 TAGAAGCGGCTCTTTCAAAAGTAATTGCTGAGAAGAACCTTGACCTGTTC 750
BSNT_06232___ 751 CTTCTCGTTATCACAGATATCTTAGAAAATGATTCACTTGCTCTTGCAAT 800
||||||||.||.||.|||||..|.|||||.|||||.|||||.|||||.||
RBAM_037630__ 751 CTTCTCGTGATTACGGATATTCTGGAAAACGATTCCCTTGCGCTTGCCAT 800
BSNT_06232___ 801 CGGTAACGAAGCAGCGAAAGTGGAAAAAGCGTTCAACGTTACATTAGAAA 850
||||.|..||||..|.||||||||||||||.||||||||.||.|||||||
RBAM_037630__ 801 CGGTGATCAAGCGTCAAAAGTGGAAAAAGCATTCAACGTGACTTTAGAAA 850
BSNT_06232___ 851 ACAACACAGCCCTCTTAAAAGGCGTTGTTTCCCGTAAAAAACAAGTCGTT 900
|||||||.||.||.|||||||||||.||.|||.|.||.||||||||||||
RBAM_037630__ 851 ACAACACGGCTCTTTTAAAAGGCGTCGTATCCAGAAAGAAACAAGTCGTT 900
BSNT_06232___ 901 CCTGTCTTAACAGACGCAATGGCTGAATAA 930
|||||.|||||||||||.||.||.||||||
RBAM_037630__ 901 CCTGTTTTAACAGACGCGATTGCAGAATAA 930
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