Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06223 and RBAM_037590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06223___yybT.1.9828.seq
# -bsequence dna-align/RBAM_037590___yybT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06223___yybT-RBAM_037590___yybT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06223___yybT-RBAM_037590___yybT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06223___yybT
# 2: RBAM_037590___yybT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1983
# Identity: 1619/1983 (81.6%)
# Similarity: 1619/1983 (81.6%)
# Gaps: 6/1983 ( 0.3%)
# Score: 6603.0
#
#
#=======================================
BSNT_06223___ 1 ATGCCAAGCTTTTATGAAAAACCGCTGTTTCGGTATCCCATCTATGCATT 50
|||||.||.|||||||||||||||.|||||||||||||||||||||||||
RBAM_037590__ 1 ATGCCTAGTTTTTATGAAAAACCGTTGTTTCGGTATCCCATCTATGCATT 50
BSNT_06223___ 51 GATTGCTCTGTCAATTATTACAATCCTCATCAGCTTTTATTTTAACTGGA 100
||||||..|||||||.||.|.|||.|||||||||.||||.|||||||||.
RBAM_037590__ 51 GATTGCATTGTCAATCATCATAATTCTCATCAGCATTTACTTTAACTGGC 100
BSNT_06223___ 101 TATTAGGAACCGTCGAAGTGCTGCTGCTGGCAGTTATTTTGTTTTTTATT 150
|..|||||.||.|||..||..|||||||.||.||.||.||||||||.|||
RBAM_037590__ 101 TGATAGGAGCCATCGGCGTTGTGCTGCTCGCCGTGATCTTGTTTTTCATT 150
BSNT_06223___ 151 AAGCGTGCTGATTCTCTTATTCGACAAGAGATTGATGCTTATATTTCTAC 200
||||||||.||||||||.||..||.||||.|||||.|.||||||.||.||
RBAM_037590__ 151 AAGCGTGCGGATTCTCTGATCAGAAAAGAAATTGACGATTATATCTCCAC 200
BSNT_06223___ 201 GTTGTCCTACAGGTTGAAAAAAGTCGGTGAAGAGGCATTGATGGAAATGC 250
|||.||.||.||.|||||||||||.||.|||||||||||.||||||||||
RBAM_037590__ 201 GTTATCGTATAGATTGAAAAAAGTAGGCGAAGAGGCATTAATGGAAATGC 250
BSNT_06223___ 251 CGATTGGAATCATGCTTTTTAATGACCAATATTATATAGAATGGGCAAAT 300
|.||.||.||.|||||.||||||||.||||||||.||.||.|||||.|||
RBAM_037590__ 251 CTATCGGGATTATGCTGTTTAATGATCAATATTACATTGAGTGGGCGAAT 300
BSNT_06223___ 301 CCGTTTCTTTCCTCTTGCTTTAATGAAAGCACTTTAGTGGGGAGATCACT 350
||||||.|.||.||.||.||||||||||||||..|.||.||..|.||.||
RBAM_037590__ 301 CCGTTTTTGTCTTCCTGTTTTAATGAAAGCACGCTCGTCGGACGGTCGCT 350
BSNT_06223___ 351 TTACGATACTTGTGAATCGGTAGTGCCGCTTATCAAACAAGAGGTGGAAT 400
.||.||.||.||.||..|.||.||||||||.|||||.||.|||||.||.|
RBAM_037590__ 351 GTATGACACATGCGAGGCCGTCGTGCCGCTGATCAAGCAGGAGGTCGATT 400
BSNT_06223___ 401 CAGAAACGGTTACATTGAATGACCGCAAGTTTAGGGTTGTCATCAAACGG 450
|.||||||.|.||.||||||||.||.|||||||..||.||.||.|||.|.
RBAM_037590__ 401 CGGAAACGATCACCTTGAATGAGCGGAAGTTTAAAGTAGTGATTAAAAGA 450
BSNT_06223___ 451 GATGAGCGTCTGTTATATTTCTTTGATGTAACAGAACAAATTCAGATTGA 500
||||||||.|||.|.||||||||||||||.||||||||.|||||||||||
RBAM_037590__ 451 GATGAGCGCCTGCTTTATTTCTTTGATGTGACAGAACAGATTCAGATTGA 500
BSNT_06223___ 501 AAAGCTATATGAAAACGAAAGAACCGTCCTGGCATATATTTTCCTTGATA 550
|||||..||.|||||.||.||||||||.|||||||||||.|||.|.||||
RBAM_037590__ 501 AAAGCAGTACGAAAATGAGAGAACCGTGCTGGCATATATCTTCTTAGATA 550
BSNT_06223___ 551 ACTATGATGATGTGACACAAGGATTGGATGACCAGACGAGAAGCACGATG 600
||||||||||.||.|||||.||..||||||||||.||||||||.||||||
RBAM_037590__ 551 ACTATGATGACGTCACACAGGGGCTGGATGACCAAACGAGAAGTACGATG 600
BSNT_06223___ 601 AACAGCCAGGTGACATCTTTGCTGAACGCTTGGGCGCAGGAGTACGGGAT 650
|||||||||||.||.||.||..|.||.||.|||||||||||||||||.||
RBAM_037590__ 601 AACAGCCAGGTCACCTCATTATTAAATGCGTGGGCGCAGGAGTACGGCAT 650
BSNT_06223___ 651 CTTCTTGAAAAGGACGTCTTCAGAGCGCTTTATCGCTGTACTTAATGAAC 700
.|||.|||||.|||||||.||.|||||.||||||||.||..|.|||||||
RBAM_037590__ 651 TTTCCTGAAACGGACGTCCTCGGAGCGGTTTATCGCGGTGTTAAATGAAC 700
BSNT_06223___ 701 ACATCTTAACTGAACTCGAAAATTCGAAGTTTTCGATTCTTGATGAAGTG 750
||||.|||||.||.||.|||||..||||.|||||||||.|.||||||.|.
RBAM_037590__ 701 ACATTTTAACGGAGCTTGAAAACGCGAAATTTTCGATTTTGGATGAAATC 750
BSNT_06223___ 751 CGGGAAAAAACCTCGTTTGACGGTGTAGCGCTGACGTTAAGCGTCGGTGT 800
||.||||||||.||..||.||..||||.|..||||..|.|||.||||..|
RBAM_037590__ 751 CGAGAAAAAACATCCGTTCACACTGTATCTTTGACCCTCAGCATCGGGAT 800
BSNT_06223___ 801 CGGGGCTTCAGTCTCTTCCCTGAAAGAACTTGGCGATTTGGCGCAATCCA 850
|||.||.||.||.||||||.||||.||.|||||.|||.|||||||.||||
RBAM_037590__ 801 CGGCGCATCGGTTTCTTCCTTGAAGGAGCTTGGAGATCTGGCGCAGTCCA 850
BSNT_06223___ 851 GCTTGGACTTAGCACTGGGACGCGGCGGAGACCAGGTAGCCATTAAGCTG 900
||.|.||.||.||.||.||.|||||.||.|||||.||.||.||.||..||
RBAM_037590__ 851 GCCTCGATTTGGCTCTCGGCCGCGGAGGCGACCAAGTGGCGATCAAAATG 900
BSNT_06223___ 901 CCAAACGGCAAGGTGAAGTTTTACGGCGGTAAAACAAACCCAATGGAGAA 950
||.||||||||||||||.|||||||||||.|||||.||.||.||||||||
RBAM_037590__ 901 CCGAACGGCAAGGTGAAATTTTACGGCGGCAAAACGAATCCGATGGAGAA 950
BSNT_06223___ 951 ACGAACAAGGGTGCGGGCCCGCGTGATTTCTCACGCTTTAAAGGAAATCG 1000
.||.|||||||||||.|||||.||||||||||||||..|.||||||||.|
RBAM_037590__ 951 GCGCACAAGGGTGCGCGCCCGGGTGATTTCTCACGCGCTCAAGGAAATTG 1000
BSNT_06223___ 1001 TCACCGAAAGCAGCAATGTGATTATCATGGGGCATAAATTCCCCGACATG 1050
||.|.||||||||||||||.|||||.||||||||.|||||.||.||.|||
RBAM_037590__ 1001 TCTCAGAAAGCAGCAATGTCATTATTATGGGGCACAAATTTCCTGATATG 1050
BSNT_06223___ 1051 GATTCTATCGGCGCAGCGATCGGGATTTTAAAGGTGGCTCAGGCAAATAA 1100
||..|..||||.||.||.|||||.||.||.||||||||.|||||.||...
RBAM_037590__ 1051 GACGCAGTCGGAGCCGCAATCGGAATATTGAAGGTGGCGCAGGCCAACGG 1100
BSNT_06223___ 1101 CAAAGATGGTTTTATCGTGATTGACCCAAATCAAATCGGATCAAGTGTGC 1150
||||||.||.|..|||||.|||||.||.||.||.|||||||||||.||.|
RBAM_037590__ 1101 CAAAGACGGCTACATCGTCATTGATCCGAACCAGATCGGATCAAGCGTTC 1150
BSNT_06223___ 1151 AGCGTTTGATTGGGGAAATCAAAAAATATGAAGAACTGTGGTCAAGATTT 1200
|||||.||||||..|||||.||||||||||||||.||||||||..|.||.
RBAM_037590__ 1151 AGCGTCTGATTGAAGAAATTAAAAAATATGAAGAGCTGTGGTCGCGGTTC 1200
BSNT_06223___ 1201 ATTACGCCTGAAGAAGCAATGGAAATTTCCAATGATGACACACTGCTTGT 1250
||.|||||.|||||.||.|||||||||||.|||||.|||||.||||||||
RBAM_037590__ 1201 ATCACGCCGGAAGAGGCGATGGAAATTTCAAATGACGACACGCTGCTTGT 1250
BSNT_06223___ 1251 GATCGTTGATACACATAAGCCGTCACTCGTTATGGAGGAACGGCTGGTCA 1300
..||||||||||||||||.|||||.||.||.|||||.||.||.||.||.|
RBAM_037590__ 1251 CGTCGTTGATACACATAAACCGTCCCTTGTGATGGAAGAGCGTCTCGTGA 1300
BSNT_06223___ 1301 ATAAAATTGAACATATCGTGGTCATCGACCATCACCGCAGAGGTGAGGAG 1350
|.|||||.||.||.|||||.||.||.|||||.|||||||||||.|||||.
RBAM_037590__ 1301 ACAAAATCGAGCACATCGTTGTGATTGACCACCACCGCAGAGGCGAGGAA 1350
BSNT_06223___ 1351 TTTATCAGAGATCCGCTGCTCGTTTATATGGAACCATACGCTTCTTCCAC 1400
|||||.|.|||.||||||||||||||||||||.|||||||||||.|||||
RBAM_037590__ 1351 TTTATTAAAGACCCGCTGCTCGTTTATATGGAGCCATACGCTTCATCCAC 1400
BSNT_06223___ 1401 AGCGGAATTGGTGACAGAGCTGCTTGAATATCAGCCGAAGCGCTTAAAAA 1450
.||.|||.|.|||||.||||||||||||||.|||||||||||..|.||||
RBAM_037590__ 1401 CGCAGAACTCGTGACGGAGCTGCTTGAATACCAGCCGAAGCGGCTCAAAA 1450
BSNT_06223___ 1451 TCAATATGATTGAAGCTACAGCCCTATTAGCTGGTATAATAGTGGATACA 1500
||||||||||||||||.||.|||||.|||||||||||||||||||||||.
RBAM_037590__ 1451 TCAATATGATTGAAGCGACGGCCCTGTTAGCTGGTATAATAGTGGATACG 1500
BSNT_06223___ 1501 AAGAGCTTTTCTCTCCGCACGGGCTCGCGGACTTTTGATGCGGCTTCTTA 1550
|||||.|||||.||.|||||||||||||||||.||.||.||.||||||||
RBAM_037590__ 1501 AAGAGTTTTTCCCTTCGCACGGGCTCGCGGACGTTCGACGCCGCTTCTTA 1550
BSNT_06223___ 1551 TTTAAGGGCAAAAGGCGCCGACACGGTGCTGGTGCAG-AAGTTCCTGAAA 1599
|||.||.||.||||||||.||.|||||.||||||||| ||||| ||.|||
RBAM_037590__ 1551 TTTGAGAGCGAAAGGCGCAGATACGGTTCTGGTGCAGAAAGTT-CTCAAA 1599
BSNT_06223___ 1600 GAAACCGTTGATTCCTATATTCAA-CGGGCGAAGCTGATCCAGCATACGG 1648
|||.||||.|.|||.|||| |||| ||||||||.|||||||||||||| |
RBAM_037590__ 1600 GAATCCGTCGGTTCTTATA-TCAAGCGGGCGAAACTGATCCAGCATAC-G 1647
BSNT_06223___ 1649 TC-CTCTATAAAGATAACATTGCGATTGCTTCTCTTCCTGAAAATGAAGA 1697
|| ||.||||||||..|.||.||||||||||||||||||||.||.|||||
RBAM_037590__ 1648 TCTCTTTATAAAGAACATATCGCGATTGCTTCTCTTCCTGAGAACGAAGA 1697
BSNT_06223___ 1698 GGAATACTTCGATCAAGTGCTGATTGCGCAGGCTGCCGATTCGCTGCTGT 1747
|||.|||||.||.||.|||||||||||||||||.||.|||||.||..|.|
RBAM_037590__ 1698 GGAGTACTTTGACCAGGTGCTGATTGCGCAGGCGGCTGATTCCCTCTTAT 1747
BSNT_06223___ 1748 CGATGAGTGAGGTTGAGGCTTCATTTGCGGTGGCGAGACGGGATGAACAA 1797
||||||||||.||.||.||||||||||||||.||.|||||||||||.||.
RBAM_037590__ 1748 CGATGAGTGAAGTGGAAGCTTCATTTGCGGTAGCCAGACGGGATGAGCAT 1797
BSNT_06223___ 1798 ACGGTTTGTATCAGTGCGCGGTCGCTTGGCGAGGTAAATGTTCAGATCAT 1847
|||||.||.|||||||||.|.|||||.||||||||.|||||.|||||.||
RBAM_037590__ 1798 ACGGTGTGCATCAGTGCGAGATCGCTGGGCGAGGTCAATGTGCAGATTAT 1847
BSNT_06223___ 1848 CATGGAGGCCCTGGAAGGCGGAGGGCATTTAACAAATGCGGCGACTCAGT 1897
.||||||||.|||||.|||||||||||||||||.||||||||.||.||||
RBAM_037590__ 1848 TATGGAGGCGCTGGATGGCGGAGGGCATTTAACCAATGCGGCAACCCAGT 1897
BSNT_06223___ 1898 TGTCCGGCATTTCAGTTTCTGAAGCGCTGGAACGGCTGAAGCACGCCATA 1947
|.||.||||||||.||.||.||||||||.|..|||||||||.|.|||||.
RBAM_037590__ 1898 TATCGGGCATTTCTGTCTCAGAAGCGCTCGTCCGGCTGAAGGAAGCCATT 1947
BSNT_06223___ 1948 GATGAGTATTTTGAGGGAGGCGTACAGAGATGA 1980
|||||.||||||||.||||||||.|||||||||
RBAM_037590__ 1948 GATGAATATTTTGAAGGAGGCGTTCAGAGATGA 1980
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