Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06212 and RBAM_037470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence dna-align/BSNT_06212___dnaC.1.9828.seq
# -bsequence dna-align/RBAM_037470___dnaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06212___dnaC-RBAM_037470___dnaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06212___dnaC-RBAM_037470___dnaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06212___dnaC
# 2: RBAM_037470___dnaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1374
# Identity: 1141/1374 (83.0%)
# Similarity: 1141/1374 (83.0%)
# Gaps: 9/1374 ( 0.7%)
# Score: 4809.0
#
#
#=======================================
BSNT_06212___ 1 ---------ATGACAGACCTTCTGAATGACCGGCTTCCTCCGCAAAATAT 41
||||||||||||||||||||.|||||.||.||||||||.||
RBAM_037470__ 1 GTGCTTAGCATGACAGACCTTCTGAATGATCGGCTGCCGCCGCAAAACAT 50
BSNT_06212___ 42 AGAAGCCGAACAAGCCGTGTTAGGCGCTATTTTTTTACAGCCGTCTGCTT 91
||||||.||.||.|||||||||||.|||.|||||||||||||||||||.|
RBAM_037470__ 51 AGAAGCTGAGCAGGCCGTGTTAGGTGCTGTTTTTTTACAGCCGTCTGCGT 100
BSNT_06212___ 92 TAACACTGGCTTCAGAAGTATTGATTCCAGATGATTTCTATAGAATGTCC 141
|||||||||||||.|||||.||||||||.|||||||||||.||||||||.
RBAM_037470__ 101 TAACACTGGCTTCTGAAGTGTTGATTCCGGATGATTTCTACAGAATGTCA 150
BSNT_06212___ 142 CACCAAAAAATCTATAATGCGATGCTGGTGCTCGGTGACCGAGGTGAACC 191
|||||||||||.||.|||||.|||||.||||||||.|||||.||||||||
RBAM_037470__ 151 CACCAAAAAATTTACAATGCCATGCTCGTGCTCGGAGACCGCGGTGAACC 200
BSNT_06212___ 192 GGTTGATCTGGTGACGGTAACATCAGAGCTTGCGAACACAGACCTGCTGG 241
|||||||.||||.||||||||.||||||||||||||.||.||..||||.|
RBAM_037470__ 201 GGTTGATTTGGTCACGGTAACGTCAGAGCTTGCGAATACCGATTTGCTAG 250
BSNT_06212___ 242 AAGAAGTAGGCGGCATTTCATATTTGACAGATATTGCAAACTCGGTGCCG 291
||||.||.||.|||.|.||.||..||||.||.||.||.||.||.||.|||
RBAM_037470__ 251 AAGAGGTGGGAGGCGTCTCTTACCTGACGGACATCGCGAATTCCGTTCCG 300
BSNT_06212___ 292 ACAGCGGCTAACATAGAATATTACGCGAAAATCGTTGAGGAAAAATCGAT 341
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_037470__ 301 ACAGCGGCTAATATAGAATATTACGCGAAAATCGTTGAGGAAAAATCGAT 350
BSNT_06212___ 342 TCTTCGCCGATTAATTAGAACTGCGACAACGATTGCTCAAGACGGGTATA 391
|||.|||||.|||||.|||||.|||||..||||.||||||||||||||||
RBAM_037470__ 351 TCTCCGCCGTTTAATCAGAACGGCGACCTCGATCGCTCAAGACGGGTATA 400
BSNT_06212___ 392 CCCGTGAGGATGAGGTCGAGGATTTACTCAGTGAAGCGGAAAAAACGATT 441
|.||.||||||||.||.||.||||||.|.||.||.|||||||||||.|||
RBAM_037470__ 401 CGCGCGAGGATGAAGTTGAAGATTTATTAAGCGATGCGGAAAAAACAATT 450
BSNT_06212___ 442 ATGGAAGTGGCACAGCGCAAAAACACGAGTGCCTTCCAAAATATTAAGGA 491
|||||.||.||.|||||.|||||..||.|.||||||||||||||.||.||
RBAM_037470__ 451 ATGGAGGTCGCGCAGCGAAAAAATTCGGGCGCCTTCCAAAATATCAAAGA 500
BSNT_06212___ 492 CGTCCTTGTCCAAACCTATGATAATATCGAACAGCTTCACAATCGAAAAG 541
|||.|||||.|||||.|||||.||.||.||.|||||||||||.||.||||
RBAM_037470__ 501 CGTGCTTGTGCAAACATATGACAACATTGAGCAGCTTCACAACCGGAAAG 550
BSNT_06212___ 542 GTGATATCACGGGGATTCCAACAGGGTTTACAGAGCTTGACCGGATGACT 591
|.|||||.||.||||||||.||.||.||||..|||||||||||||||||.
RBAM_037470__ 551 GCGATATTACCGGGATTCCGACTGGTTTTATTGAGCTTGACCGGATGACG 600
BSNT_06212___ 592 GCGGGTTTTCAGCGCAACGACTTGATCATTGTGGCTGCCCGTCCGTCAGT 641
||||||||||||||.||.||.|||||||||||.||.|||||||||||.||
RBAM_037470__ 601 GCGGGTTTTCAGCGGAATGATTTGATCATTGTCGCGGCCCGTCCGTCTGT 650
BSNT_06212___ 642 AGGGAAAACAGCCTTTGCCCTGAACATCGCACAAAACGTGGCGACGAAAA 691
.||||||||.||.||.|||.|.||.||.||.|||||||||||.||.||||
RBAM_037470__ 651 GGGGAAAACGGCGTTCGCCTTAAATATTGCGCAAAACGTGGCCACCAAAA 700
BSNT_06212___ 692 CCGATGAGAGCGTCGCGATTTTCAGTCTTGAGATGGGTGCAGAGCAGCTC 741
|.|||||||||||||||||.||||||||||||||||||||.||||||||.
RBAM_037470__ 701 CGGATGAGAGCGTCGCGATATTCAGTCTTGAGATGGGTGCCGAGCAGCTT 750
BSNT_06212___ 742 GTTATGCGTATGCTTTGTGCCGAGGGAAATATCAATGCCCAGAATCTCCG 791
||.|||||||||||.||.||.||.||.|||||.||||||||.||||||.|
RBAM_037470__ 751 GTCATGCGTATGCTCTGCGCTGAAGGGAATATTAATGCCCAAAATCTCAG 800
BSNT_06212___ 792 TACAGGTAACCTGACCGAAGAGGATTGGGGCAAGCTGACGATGGCAATGG 841
.||.||.||.|||||.|||||.|||||||||||||||||||||||.||||
RBAM_037470__ 801 AACGGGAAATCTGACGGAAGAAGATTGGGGCAAGCTGACGATGGCGATGG 850
BSNT_06212___ 842 GAAGCCTGTCGAACAGCGGGATTTACATCGATGATACACCGGGTATTCGG 891
||||.|||||.||||||||.||.|..||.|||||.||.||.||.||.||.
RBAM_037470__ 851 GAAGTCTGTCAAACAGCGGTATCTTTATAGATGACACCCCCGGCATCCGC 900
BSNT_06212___ 892 GTGAGCGAAATTCGTGCCAAGTGCCGCCGCTTGAAGCAGGAAAGCGGGCT 941
||.||||||||.|||.|.||.||||||.|..||||||||||||.|||..|
RBAM_037470__ 901 GTCAGCGAAATCCGTTCAAAATGCCGCAGGCTGAAGCAGGAAAACGGATT 950
BSNT_06212___ 942 GGGCATGATTTTGATTGATTACCTGCAATTGATTCAGGGAAGCGGTCGTT 991
||||||||||||.|||||.||||||||..|.||||||||||||||.||||
RBAM_037470__ 951 GGGCATGATTTTAATTGACTACCTGCAGCTCATTCAGGGAAGCGGCCGTT 1000
BSNT_06212___ 992 CAAAGGACAACCGTCAGCAGGAAGTATCTGAAATTTCCCGTGAACTGAAG 1041
|||..||||||||.|||||.||.|||||.||||||||.||.|..||.||.
RBAM_037470__ 1001 CAAGCGACAACCGCCAGCAAGAGGTATCGGAAATTTCACGGGCGCTAAAA 1050
BSNT_06212___ 1042 TCGATTGCCAGGGAGCTGCAAGTCCCAGTTATCGCGCTTTCCCAGCTTTC 1091
.||.|.||..|||||||..|||||||.||.|||||.||.||.|||||.||
RBAM_037470__ 1051 GCGCTGGCGCGGGAGCTTGAAGTCCCGGTCATCGCCCTGTCTCAGCTCTC 1100
BSNT_06212___ 1092 CAGGGGTGTTGAGCAGCGTCAGGATAAACGGCCGATGATGTCTGATATCC 1141
|.||||||||||||||||.|||||||||||.|||||||||||.|||||||
RBAM_037470__ 1101 CCGGGGTGTTGAGCAGCGGCAGGATAAACGTCCGATGATGTCAGATATCC 1150
BSNT_06212___ 1142 GGGAATCAGGAAGTATCGAGCAGGACGCGGATATTGTCGCGTTCCTTTAT 1191
|.||.||.||||||||.||||||||.||.||.||.|||||.|||||.|||
RBAM_037470__ 1151 GTGAGTCGGGAAGTATTGAGCAGGATGCCGACATCGTCGCCTTCCTGTAT 1200
BSNT_06212___ 1192 CGTGATGACTACTATGACAAAGAAACCGAGAATAAAAATATTATCGAAAT 1241
||||||||.||||||||.||||||.||||.||.|||||.||.||||||||
RBAM_037470__ 1201 CGTGATGATTACTATGATAAAGAATCCGAAAACAAAAACATCATCGAAAT 1250
BSNT_06212___ 1242 TATTATCGCCAAACAGCGTAACGGCCCGGTAGGAACCGTGTCTCTTGCGT 1291
.|||||.|||||||||||||||||||||||.||.|||||.||.||.||.|
RBAM_037470__ 1251 CATTATTGCCAAACAGCGTAACGGCCCGGTGGGCACCGTCTCACTGGCTT 1300
BSNT_06212___ 1292 TCGTAAAAGAATACAACAAATTCGTCAACCTGGAACGGCGTTTTGATGAC 1341
|.||.|||||||||||.||.|||||.|||||||||.||||.|||||||||
RBAM_037470__ 1301 TTGTGAAAGAATACAATAAGTTCGTAAACCTGGAAAGGCGCTTTGATGAC 1350
BSNT_06212___ 1342 GCAGGTGTTCCGCCCGGCGCATAA 1365
|..|||||||||.|.||.||.|||
RBAM_037470__ 1351 GGCGGTGTTCCGGCAGGTGCGTAA 1374
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