Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06196 and RBAM_037360

See Amino acid alignment / Visit BSNT_06196 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:39
# Commandline: needle
#    -asequence dna-align/BSNT_06196___yycJ.1.9828.seq
#    -bsequence dna-align/RBAM_037360___yycJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06196___yycJ-RBAM_037360___yycJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06196___yycJ-RBAM_037360___yycJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06196___yycJ
# 2: RBAM_037360___yycJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 797
# Identity:     654/797 (82.1%)
# Similarity:   654/797 (82.1%)
# Gaps:           4/797 ( 0.5%)
# Score: 2674.0
# 
#
#=======================================

BSNT_06196___      1 ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTT     50
                     |||.||||||||||||||||.|||||||||||||||||.|||||.|||||
RBAM_037360__      1 ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTT     50

BSNT_06196___     51 TTACCTTGAAACAGAGGATCACGCATTTTTAGTGGACGCCGGTTTGAGCG    100
                     |||.||.||.||||||||.|||.|.|||.|.|||||.|||||..||||||
RBAM_037360__     51 TTATCTGGAGACAGAGGAGCACTCTTTTCTGGTGGATGCCGGCCTGAGCG    100

BSNT_06196___    101 GGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGAT    150
                     |.|||||.|||||.||||||||||.|.|.|||||.||.|||.|.||.||.
RBAM_037360__    101 GTAAAGCGATGGACGGGCTGATGGAGAAAATCGGCCGCAAGATAGACGAC    150

BSNT_06196___    151 GTAGACGGCATTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCT    200
                     ||.||||||||.|||||.||.||.|||||.||.|||||||||||.||.||
RBAM_037360__    151 GTCGACGGCATCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCT    200

BSNT_06196___    201 TGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCGAATGAGAAGA    250
                     .||.||..|.||.|||||||||...|||||..||||.||.|||||.||||
RBAM_037360__    201 CGGCGTCATTGCGAGAAAGTACGGTCTTCCCGTCTACGCCAATGAAAAGA    250

BSNT_06196___    251 CTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAG    300
                     |.||||||||||||||||||||.|||||.||..|.||.||||..||||||
RBAM_037360__    251 CGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAG    300

BSNT_06196___    301 TTTGTATTTCCGATGGAAACAGTGAAGTCGTTCGGCGGACTTGATGTTGA    350
                     |||.|.||.||||||||||..|||||.||.||||||||.|||||||||||
RBAM_037360__    301 TTTCTGTTCCCGATGGAAAGCGTGAAATCCTTCGGCGGGCTTGATGTTGA    350

BSNT_06196___    351 ATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC    400
                     .|||||.|||||.||.||.||.|||||||||||||||||||||||.||||
RBAM_037360__    351 GTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC    400

BSNT_06196___    401 ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGC    450
                     |.||..|.|||.||||||||||..|.|||||.||.||.||.|||||.|||
RBAM_037360__    401 ACTACCAAGGCAGAAAGCTCGCACTGATGACGGACACCGGGTATGTGAGC    450

BSNT_06196___    451 GACCGGATGAAAGGCATTATCCGTTCAGCGAATGTGTTTGTGTTTGAAAG    500
                     |||.|.||||||||||||||||||||.||.||||||||||||||||||||
RBAM_037360__    451 GACAGAATGAAAGGCATTATCCGTTCGGCCAATGTGTTTGTGTTTGAAAG    500

BSNT_06196___    501 CAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTA    550
                     |||.||||||||||||||||||||||||||.||||||||.||||||||||
RBAM_037360__    501 CAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTA    550

BSNT_06196___    551 AGCGGCGGATTTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCC    600
                     ||||||||||||||||.||.|||||.|||||.||.||||||||.||.||.
RBAM_037360__    551 AGCGGCGGATTTTAAGCGATGTCGGCCACGTCTCCAATGAAGACGCGGCG    600

BSNT_06196___    601 TTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTATTTACCTGGC    650
                     .|.||.|||||.||||||||.||.||.|..||.||.||.||.||..||||
RBAM_037360__    601 CTCGCCATGACTGATGTCATCGGTGACGGCACATCGCGCATCTATTTGGC    650

BSNT_06196___    651 GCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGC    700
                     ||||.|||||||.||||||||.||||||||.|||||.||||||||.||||
RBAM_037360__    651 GCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGC    700

BSNT_06196___    701 AGCAGACATTGGCTTCTAAAGGATTTGT-GACGGGTGAGACATTTGACTT    749
                     ||||||||||||||.|.||||||||||| |.|||| ||.||.|||.|.||
RBAM_037360__    701 AGCAGACATTGGCTGCGAAAGGATTTGTCGCCGGG-GAAACGTTTCAGTT    749

BSNT_06196___    750 ATACGACACCGATCCGAAGAAGGCC-ACTCCGCTTTGCGCTGTATAA    795
                     ||..||.||||||||||| ||..|| ||.|||||.|||||.||.|||
RBAM_037360__    750 ATTTGATACCGATCCGAA-AATCCCGACGCCGCTGTGCGCCGTGTAA    795


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