Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06153 and RBAM_037000

See Amino acid alignment / Visit BSNT_06153 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:38
# Commandline: needle
#    -asequence dna-align/BSNT_06153___fbp.1.9828.seq
#    -bsequence dna-align/RBAM_037000___fbp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06153___fbp-RBAM_037000___fbp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06153___fbp-RBAM_037000___fbp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06153___fbp
# 2: RBAM_037000___fbp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1926
# Identity:    1730/1926 (89.8%)
# Similarity:  1730/1926 (89.8%)
# Gaps:           0/1926 ( 0.0%)
# Score: 7866.0
# 
#
#=======================================

BSNT_06153___      1 TTGGAAAGCAAGTACCTAGATCTACTCGCACAAAAATACGATTGTGAAGA     50
                     |||||||..||.||..|||||||.||||||||||||||||||||||||||
RBAM_037000__      1 TTGGAAACGAAATATTTAGATCTGCTCGCACAAAAATACGATTGTGAAGA     50

BSNT_06153___     51 AAAAGTGGTAACAGAAATCATTAATTTGAAAGCGATATTGAACCTGCCAA    100
                     |||||||||.||.||||||||||||.|||||||||||.||||||||||.|
RBAM_037000__     51 AAAAGTGGTCACGGAAATCATTAATCTGAAAGCGATACTGAACCTGCCGA    100

BSNT_06153___    101 AAGGCACCGAGCATTTTGTCAGTGATTTGCACGGGGAGTATCAGGCATTC    150
                     ||||.|||||||||||.|||||||||.|||||||||||||||||||||||
RBAM_037000__    101 AAGGAACCGAGCATTTCGTCAGTGATCTGCACGGGGAGTATCAGGCATTC    150

BSNT_06153___    151 CAGCACGTGCTGCGCAATGGTTCAGGACGAGTCAAAGAGAAGATACGCGA    200
                     ||||||||||||||.||.|||||||||.|.||.|||||||||||.|||||
RBAM_037000__    151 CAGCACGTGCTGCGGAACGGTTCAGGAAGGGTTAAAGAGAAGATCCGCGA    200

BSNT_06153___    201 CATCTTCAGCGGTGTCATTTACGATAGAGAAATCGATGAATTAGCAGCAC    250
                     .||.||||||||.||||||||||||||||||||.||||||.|.||.||..
RBAM_037000__    201 TATTTTCAGCGGCGTCATTTACGATAGAGAAATTGATGAACTGGCGGCTT    250

BSNT_06153___    251 TGGTCTATTATCCGGAAGACAAACTGAAGTTAATCAAACATGACTTTGAT    300
                     |||||||||||||||||||||||||||||.|.||||||||||||||||||
RBAM_037000__    251 TGGTCTATTATCCGGAAGACAAACTGAAGCTGATCAAACATGACTTTGAT    300

BSNT_06153___    301 GCGAAAGCAGCATTAAACGAGTGGTATAAAGAAACGATTAACCGAATGAT    350
                     .||||||..||||||||||||||||||||||||||||||.||||.|||||
RBAM_037000__    301 ACGAAAGAGGCATTAAACGAGTGGTATAAAGAAACGATTCACCGGATGAT    350

BSNT_06153___    351 TAAGCTCGTTTCATATTGCTCCTCCAAGTATACCCGCTCCAAACTGCGCA    400
                     ||||||||||||.|||||.||.||||||||.||||||||||||.||||||
RBAM_037000__    351 TAAGCTCGTTTCTTATTGTTCTTCCAAGTACACCCGCTCCAAATTGCGCA    400

BSNT_06153___    401 AAGCACTGCCTACTCAGTTTGCTTATATTACGGAGGAGCTGCTATACAAA    450
                     ||||||||||..|.||.||||||||||||.|.||.||||||||.||||||
RBAM_037000__    401 AAGCACTGCCCGCCCAATTTGCTTATATTTCCGAAGAGCTGCTGTACAAA    450

BSNT_06153___    451 ACAGAACAAGCAGGCAACAAGGAGCAATATTACTCCGAAATCATTGATCA    500
                     |||||||||||.|.||||||.||.|||||.||.|||||||||||.||.||
RBAM_037000__    451 ACAGAACAAGCCGCCAACAAAGAACAATACTATTCCGAAATCATAGAACA    500

BSNT_06153___    501 GATCATTGAGCTTGGCCAAGCCGATAAGCTGATCACCGGCCTTGCTTACA    550
                     ||||||||.|||.|||||.||||||||||||||||||||||||||.||||
RBAM_037000__    501 GATCATTGCGCTCGGCCAGGCCGATAAGCTGATCACCGGCCTTGCCTACA    550

BSNT_06153___    551 GCGTTCAGCGGCTGGTGGTCGACCATCTGCATGTGGTCGGCGATATTTAC    600
                     ||...|||||..||||||||||||||||||||||.||||||||||||||.
RBAM_037000__    551 GCACGCAGCGATTGGTGGTCGACCATCTGCATGTTGTCGGCGATATTTAT    600

BSNT_06153___    601 GACCGCGGCCCGCAGCCGGATAGGATTATGGAAGAACTGATCAACTATCA    650
                     ||||||||.|||||||||||||.|||.|||||||||||||||||||||||
RBAM_037000__    601 GACCGCGGACCGCAGCCGGATAAGATCATGGAAGAACTGATCAACTATCA    650

BSNT_06153___    651 TTCTGTCGATATTCAGTGGGGAAATCACGATGTCCTTTGGATCGGAGCCT    700
                     |||.||.||||||||.|||||.|||||.|||||.||.|||||.||.||.|
RBAM_037000__    651 TTCAGTGGATATTCAATGGGGGAATCATGATGTTCTCTGGATAGGCGCTT    700

BSNT_06153___    701 ATGCCGGGTCCAAAGTGTGCTTGGCCAATATTATCCGCATCTGTGCCCGC    750
                     ||.||||.||.|||||.|||.||||.||.|||||||||||||||||||||
RBAM_037000__    701 ATTCCGGCTCAAAAGTATGCCTGGCAAACATTATCCGCATCTGTGCCCGC    750

BSNT_06153___    751 TACGATAACTTGGATATTATTGAAGACGTGTACGGCATCAACCTGAGACC    800
                     ||.||.||..|||||||||||||||||||.|||||||||||.||||||||
RBAM_037000__    751 TATGACAATCTGGATATTATTGAAGACGTTTACGGCATCAATCTGAGACC    800

BSNT_06153___    801 GCTGCTGAACCTGGCCGAAAAATATTACGATGATAATCCAGCATTCCGTC    850
                     |||..|||||||.|||||||||||||||||||||||.||..|.|||||.|
RBAM_037000__    801 GCTATTGAACCTTGCCGAAAAATATTACGATGATAACCCGTCTTTCCGCC    850

BSNT_06153___    851 CAAAAGCAGACGACAACAGGCCAGAGGATGAGATTAAGCAAATCACAAAA    900
                     |.|||||.|||||.|||||.|||||.|||||||||||.||||||||||||
RBAM_037000__    851 CGAAAGCGGACGAAAACAGACCAGAAGATGAGATTAAACAAATCACAAAA    900

BSNT_06153___    901 ATCCATCAGGCGATTGCGATGATCCAATTCAAGCTTGAGAGCCCGATTAT    950
                     ||.|||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_037000__    901 ATTCATCAGGCGATCGCGATGATCCAATTCAAGCTTGAGAGCCCGATTAT    950

BSNT_06153___    951 CAAGAGACGGCCGAACTTTAATATGGAAGAGCGGCTGTTATTAGAGAAAA   1000
                     .||||||||||||||||||||||||||.||.|||||||||.|.||.||.|
RBAM_037000__    951 TAAGAGACGGCCGAACTTTAATATGGAGGAACGGCTGTTACTGGAAAAGA   1000

BSNT_06153___   1001 TAGATTATGACAAAAATGAAATCACGCTGAACGGTAAAACATATCAACTG   1050
                     |.|||||||||...||||||||||||||||||||.|||||||||||||||
RBAM_037000__   1001 TCGATTATGACCGCAATGAAATCACGCTGAACGGAAAAACATATCAACTG   1050

BSNT_06153___   1051 GAAAACACCTGCTTTGCGACGATTAATCCGGAGCAGCCAGATCAGCTATT   1100
                     |||||||||||||||||||||.|.|||||..|.|||||.||..||||.||
RBAM_037000__   1051 GAAAACACCTGCTTTGCGACGGTGAATCCTAAACAGCCTGACGAGCTGTT   1100

BSNT_06153___   1101 AGAAGAAGAAGCAGAAGTCATAGACAAGCTGCTATTCTCTGTCCAGCATT   1150
                     |||||||||||||||||||||.|||||||||||.||||||||.|||.|.|
RBAM_037000__   1101 AGAAGAAGAAGCAGAAGTCATGGACAAGCTGCTGTTCTCTGTTCAGAACT   1150

BSNT_06153___   1151 CCGAAAAGCTGGGCCGCCATATGAATTTTATGATGAAAAAAGGCAGCCTT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__   1151 CCGAAAAGCTGGGCCGCCATATGAATTTTATGATGAAAAAAGGCAGCCTT   1200

BSNT_06153___   1201 TATTTAAAATATAACGGCAACCTGTTGATTCACGGCTGTATTCCTGTCGA   1250
                     ||||||||||||||||||||||||.|||||||||||||||||||.|||||
RBAM_037000__   1201 TATTTAAAATATAACGGCAACCTGCTGATTCACGGCTGTATTCCCGTCGA   1250

BSNT_06153___   1251 TGAAAACGGCAATATGGAAACGATGATGATTGAGGATAAACCGTATGCGG   1300
                     |||||||||||..|||||||||||||||||.|||||||||.|.|||||||
RBAM_037000__   1251 TGAAAACGGCAGCATGGAAACGATGATGATAGAGGATAAAGCTTATGCGG   1300

BSNT_06153___   1301 GCCGTGAGCTGCTCGATGTATTTGAACGATTCTTGCGGGAAGCCTTTGCC   1350
                     ||||.||||||||.||||||||||||||.|||||.||||||||.||||||
RBAM_037000__   1301 GCCGAGAGCTGCTAGATGTATTTGAACGGTTCTTACGGGAAGCGTTTGCC   1350

BSNT_06153___   1351 CACCCGGAAGAAACCGATGATCTGGCGACTGATATGGCCTGGTATTTATG   1400
                     ||.||||||||||||||||||||||||||.||||||.|.|||||.|||||
RBAM_037000__   1351 CATCCGGAAGAAACCGATGATCTGGCGACAGATATGACTTGGTACTTATG   1400

BSNT_06153___   1401 GACAGGCGAGTACTCCTCTCTCTTTGGAAAACGCGCCATGACAACATTTG   1450
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
RBAM_037000__   1401 GACAGGCGAATACTCCTCTCTCTTTGGAAAACGCGCCATGACAACCTTTG   1450

BSNT_06153___   1451 AGCGGTATTTCATTAAAGAGAAGGAAACGCATAAAGAAAAGAAAAACCCG   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__   1451 AGCGGTATTTCATTAAAGAGAAGGAAACGCATAAAGAAAAGAAAAACCCG   1500

BSNT_06153___   1501 TATTATTATTTACGAGAAGACGAGGCAACCTGCCGAAACATCCTGGCAGA   1550
                     |||||.|||||.||.||||||||.|||.|||||||||||||||||...||
RBAM_037000__   1501 TATTACTATTTGCGTGAAGACGAAGCAGCCTGCCGAAACATCCTGATGGA   1550

BSNT_06153___   1551 ATTCGGCCTCAATCCAGATCACGGCCATATCATCAACGGCCATACACCCG   1600
                     ||||||.|||||.||.||||||||||||||||||||||||||||||||.|
RBAM_037000__   1551 ATTCGGTCTCAACCCGGATCACGGCCATATCATCAACGGCCATACACCGG   1600

BSNT_06153___   1601 TAAAAGAAATCGAAGGAGAAGACCCAATCAAAGCAAACGGAAAAATGATC   1650
                     ||||||||||||||||.|||||.||.|||||.||||||||||||||||||
RBAM_037000__   1601 TAAAAGAAATCGAAGGCGAAGATCCGATCAAGGCAAACGGAAAAATGATC   1650

BSNT_06153___   1651 GTCATCGACGGCGGCTTCTCCAAAGCCTACCAATCCACAACAGGCATCGC   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__   1651 GTCATCGACGGCGGCTTCTCCAAAGCCTACCAATCCACAACAGGCATCGC   1700

BSNT_06153___   1701 TGGCTACACGCTGCTATACAACTCCTACGGCATGCAGCTCGTCGCCCATA   1750
                     .|||||||||||..||||||||||.|||||||||||||||||||||||||
RBAM_037000__   1701 CGGCTACACGCTCTTATACAACTCTTACGGCATGCAGCTCGTCGCCCATA   1750

BSNT_06153___   1751 AACACTTCAACTCCAAGGCAGAAGTCCTAAGCACCGGAACCGACGTCTTA   1800
                     |||||||.|||||||||||.|||||.||.|||||||||||||||||||||
RBAM_037000__   1751 AACACTTTAACTCCAAGGCCGAAGTGCTGAGCACCGGAACCGACGTCTTA   1800

BSNT_06153___   1801 ACGGTGAAGCGATTAGTGGACAAAGAGCTTGAGCGGAAGAAAGTGAAGGA   1850
                     ||.|||||.||||||||.|||||||||||.|||||||||||||||||.||
RBAM_037000__   1801 ACAGTGAAACGATTAGTCGACAAAGAGCTGGAGCGGAAGAAAGTGAAAGA   1850

BSNT_06153___   1851 AACGAATGTGGGTGAGGAGCTGCTGCAGGAAGTGGCTATTTTGGAGAGTT   1900
                     |||.||.||.|||||.||.|||.||.|.||||||||.||||||||||...
RBAM_037000__   1851 AACAAACGTCGGTGAAGAACTGATGAAAGAAGTGGCGATTTTGGAGAAGC   1900

BSNT_06153___   1901 TGCGGGAGTATCGGTATATGAAGTGA   1926
                     ||||||||||||||||||||||||||
RBAM_037000__   1901 TGCGGGAGTATCGGTATATGAAGTGA   1926


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