Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06153 and RBAM_037000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:38
# Commandline: needle
# -asequence dna-align/BSNT_06153___fbp.1.9828.seq
# -bsequence dna-align/RBAM_037000___fbp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06153___fbp-RBAM_037000___fbp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06153___fbp-RBAM_037000___fbp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06153___fbp
# 2: RBAM_037000___fbp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1926
# Identity: 1730/1926 (89.8%)
# Similarity: 1730/1926 (89.8%)
# Gaps: 0/1926 ( 0.0%)
# Score: 7866.0
#
#
#=======================================
BSNT_06153___ 1 TTGGAAAGCAAGTACCTAGATCTACTCGCACAAAAATACGATTGTGAAGA 50
|||||||..||.||..|||||||.||||||||||||||||||||||||||
RBAM_037000__ 1 TTGGAAACGAAATATTTAGATCTGCTCGCACAAAAATACGATTGTGAAGA 50
BSNT_06153___ 51 AAAAGTGGTAACAGAAATCATTAATTTGAAAGCGATATTGAACCTGCCAA 100
|||||||||.||.||||||||||||.|||||||||||.||||||||||.|
RBAM_037000__ 51 AAAAGTGGTCACGGAAATCATTAATCTGAAAGCGATACTGAACCTGCCGA 100
BSNT_06153___ 101 AAGGCACCGAGCATTTTGTCAGTGATTTGCACGGGGAGTATCAGGCATTC 150
||||.|||||||||||.|||||||||.|||||||||||||||||||||||
RBAM_037000__ 101 AAGGAACCGAGCATTTCGTCAGTGATCTGCACGGGGAGTATCAGGCATTC 150
BSNT_06153___ 151 CAGCACGTGCTGCGCAATGGTTCAGGACGAGTCAAAGAGAAGATACGCGA 200
||||||||||||||.||.|||||||||.|.||.|||||||||||.|||||
RBAM_037000__ 151 CAGCACGTGCTGCGGAACGGTTCAGGAAGGGTTAAAGAGAAGATCCGCGA 200
BSNT_06153___ 201 CATCTTCAGCGGTGTCATTTACGATAGAGAAATCGATGAATTAGCAGCAC 250
.||.||||||||.||||||||||||||||||||.||||||.|.||.||..
RBAM_037000__ 201 TATTTTCAGCGGCGTCATTTACGATAGAGAAATTGATGAACTGGCGGCTT 250
BSNT_06153___ 251 TGGTCTATTATCCGGAAGACAAACTGAAGTTAATCAAACATGACTTTGAT 300
|||||||||||||||||||||||||||||.|.||||||||||||||||||
RBAM_037000__ 251 TGGTCTATTATCCGGAAGACAAACTGAAGCTGATCAAACATGACTTTGAT 300
BSNT_06153___ 301 GCGAAAGCAGCATTAAACGAGTGGTATAAAGAAACGATTAACCGAATGAT 350
.||||||..||||||||||||||||||||||||||||||.||||.|||||
RBAM_037000__ 301 ACGAAAGAGGCATTAAACGAGTGGTATAAAGAAACGATTCACCGGATGAT 350
BSNT_06153___ 351 TAAGCTCGTTTCATATTGCTCCTCCAAGTATACCCGCTCCAAACTGCGCA 400
||||||||||||.|||||.||.||||||||.||||||||||||.||||||
RBAM_037000__ 351 TAAGCTCGTTTCTTATTGTTCTTCCAAGTACACCCGCTCCAAATTGCGCA 400
BSNT_06153___ 401 AAGCACTGCCTACTCAGTTTGCTTATATTACGGAGGAGCTGCTATACAAA 450
||||||||||..|.||.||||||||||||.|.||.||||||||.||||||
RBAM_037000__ 401 AAGCACTGCCCGCCCAATTTGCTTATATTTCCGAAGAGCTGCTGTACAAA 450
BSNT_06153___ 451 ACAGAACAAGCAGGCAACAAGGAGCAATATTACTCCGAAATCATTGATCA 500
|||||||||||.|.||||||.||.|||||.||.|||||||||||.||.||
RBAM_037000__ 451 ACAGAACAAGCCGCCAACAAAGAACAATACTATTCCGAAATCATAGAACA 500
BSNT_06153___ 501 GATCATTGAGCTTGGCCAAGCCGATAAGCTGATCACCGGCCTTGCTTACA 550
||||||||.|||.|||||.||||||||||||||||||||||||||.||||
RBAM_037000__ 501 GATCATTGCGCTCGGCCAGGCCGATAAGCTGATCACCGGCCTTGCCTACA 550
BSNT_06153___ 551 GCGTTCAGCGGCTGGTGGTCGACCATCTGCATGTGGTCGGCGATATTTAC 600
||...|||||..||||||||||||||||||||||.||||||||||||||.
RBAM_037000__ 551 GCACGCAGCGATTGGTGGTCGACCATCTGCATGTTGTCGGCGATATTTAT 600
BSNT_06153___ 601 GACCGCGGCCCGCAGCCGGATAGGATTATGGAAGAACTGATCAACTATCA 650
||||||||.|||||||||||||.|||.|||||||||||||||||||||||
RBAM_037000__ 601 GACCGCGGACCGCAGCCGGATAAGATCATGGAAGAACTGATCAACTATCA 650
BSNT_06153___ 651 TTCTGTCGATATTCAGTGGGGAAATCACGATGTCCTTTGGATCGGAGCCT 700
|||.||.||||||||.|||||.|||||.|||||.||.|||||.||.||.|
RBAM_037000__ 651 TTCAGTGGATATTCAATGGGGGAATCATGATGTTCTCTGGATAGGCGCTT 700
BSNT_06153___ 701 ATGCCGGGTCCAAAGTGTGCTTGGCCAATATTATCCGCATCTGTGCCCGC 750
||.||||.||.|||||.|||.||||.||.|||||||||||||||||||||
RBAM_037000__ 701 ATTCCGGCTCAAAAGTATGCCTGGCAAACATTATCCGCATCTGTGCCCGC 750
BSNT_06153___ 751 TACGATAACTTGGATATTATTGAAGACGTGTACGGCATCAACCTGAGACC 800
||.||.||..|||||||||||||||||||.|||||||||||.||||||||
RBAM_037000__ 751 TATGACAATCTGGATATTATTGAAGACGTTTACGGCATCAATCTGAGACC 800
BSNT_06153___ 801 GCTGCTGAACCTGGCCGAAAAATATTACGATGATAATCCAGCATTCCGTC 850
|||..|||||||.|||||||||||||||||||||||.||..|.|||||.|
RBAM_037000__ 801 GCTATTGAACCTTGCCGAAAAATATTACGATGATAACCCGTCTTTCCGCC 850
BSNT_06153___ 851 CAAAAGCAGACGACAACAGGCCAGAGGATGAGATTAAGCAAATCACAAAA 900
|.|||||.|||||.|||||.|||||.|||||||||||.||||||||||||
RBAM_037000__ 851 CGAAAGCGGACGAAAACAGACCAGAAGATGAGATTAAACAAATCACAAAA 900
BSNT_06153___ 901 ATCCATCAGGCGATTGCGATGATCCAATTCAAGCTTGAGAGCCCGATTAT 950
||.|||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_037000__ 901 ATTCATCAGGCGATCGCGATGATCCAATTCAAGCTTGAGAGCCCGATTAT 950
BSNT_06153___ 951 CAAGAGACGGCCGAACTTTAATATGGAAGAGCGGCTGTTATTAGAGAAAA 1000
.||||||||||||||||||||||||||.||.|||||||||.|.||.||.|
RBAM_037000__ 951 TAAGAGACGGCCGAACTTTAATATGGAGGAACGGCTGTTACTGGAAAAGA 1000
BSNT_06153___ 1001 TAGATTATGACAAAAATGAAATCACGCTGAACGGTAAAACATATCAACTG 1050
|.|||||||||...||||||||||||||||||||.|||||||||||||||
RBAM_037000__ 1001 TCGATTATGACCGCAATGAAATCACGCTGAACGGAAAAACATATCAACTG 1050
BSNT_06153___ 1051 GAAAACACCTGCTTTGCGACGATTAATCCGGAGCAGCCAGATCAGCTATT 1100
|||||||||||||||||||||.|.|||||..|.|||||.||..||||.||
RBAM_037000__ 1051 GAAAACACCTGCTTTGCGACGGTGAATCCTAAACAGCCTGACGAGCTGTT 1100
BSNT_06153___ 1101 AGAAGAAGAAGCAGAAGTCATAGACAAGCTGCTATTCTCTGTCCAGCATT 1150
|||||||||||||||||||||.|||||||||||.||||||||.|||.|.|
RBAM_037000__ 1101 AGAAGAAGAAGCAGAAGTCATGGACAAGCTGCTGTTCTCTGTTCAGAACT 1150
BSNT_06153___ 1151 CCGAAAAGCTGGGCCGCCATATGAATTTTATGATGAAAAAAGGCAGCCTT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__ 1151 CCGAAAAGCTGGGCCGCCATATGAATTTTATGATGAAAAAAGGCAGCCTT 1200
BSNT_06153___ 1201 TATTTAAAATATAACGGCAACCTGTTGATTCACGGCTGTATTCCTGTCGA 1250
||||||||||||||||||||||||.|||||||||||||||||||.|||||
RBAM_037000__ 1201 TATTTAAAATATAACGGCAACCTGCTGATTCACGGCTGTATTCCCGTCGA 1250
BSNT_06153___ 1251 TGAAAACGGCAATATGGAAACGATGATGATTGAGGATAAACCGTATGCGG 1300
|||||||||||..|||||||||||||||||.|||||||||.|.|||||||
RBAM_037000__ 1251 TGAAAACGGCAGCATGGAAACGATGATGATAGAGGATAAAGCTTATGCGG 1300
BSNT_06153___ 1301 GCCGTGAGCTGCTCGATGTATTTGAACGATTCTTGCGGGAAGCCTTTGCC 1350
||||.||||||||.||||||||||||||.|||||.||||||||.||||||
RBAM_037000__ 1301 GCCGAGAGCTGCTAGATGTATTTGAACGGTTCTTACGGGAAGCGTTTGCC 1350
BSNT_06153___ 1351 CACCCGGAAGAAACCGATGATCTGGCGACTGATATGGCCTGGTATTTATG 1400
||.||||||||||||||||||||||||||.||||||.|.|||||.|||||
RBAM_037000__ 1351 CATCCGGAAGAAACCGATGATCTGGCGACAGATATGACTTGGTACTTATG 1400
BSNT_06153___ 1401 GACAGGCGAGTACTCCTCTCTCTTTGGAAAACGCGCCATGACAACATTTG 1450
|||||||||.|||||||||||||||||||||||||||||||||||.||||
RBAM_037000__ 1401 GACAGGCGAATACTCCTCTCTCTTTGGAAAACGCGCCATGACAACCTTTG 1450
BSNT_06153___ 1451 AGCGGTATTTCATTAAAGAGAAGGAAACGCATAAAGAAAAGAAAAACCCG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__ 1451 AGCGGTATTTCATTAAAGAGAAGGAAACGCATAAAGAAAAGAAAAACCCG 1500
BSNT_06153___ 1501 TATTATTATTTACGAGAAGACGAGGCAACCTGCCGAAACATCCTGGCAGA 1550
|||||.|||||.||.||||||||.|||.|||||||||||||||||...||
RBAM_037000__ 1501 TATTACTATTTGCGTGAAGACGAAGCAGCCTGCCGAAACATCCTGATGGA 1550
BSNT_06153___ 1551 ATTCGGCCTCAATCCAGATCACGGCCATATCATCAACGGCCATACACCCG 1600
||||||.|||||.||.||||||||||||||||||||||||||||||||.|
RBAM_037000__ 1551 ATTCGGTCTCAACCCGGATCACGGCCATATCATCAACGGCCATACACCGG 1600
BSNT_06153___ 1601 TAAAAGAAATCGAAGGAGAAGACCCAATCAAAGCAAACGGAAAAATGATC 1650
||||||||||||||||.|||||.||.|||||.||||||||||||||||||
RBAM_037000__ 1601 TAAAAGAAATCGAAGGCGAAGATCCGATCAAGGCAAACGGAAAAATGATC 1650
BSNT_06153___ 1651 GTCATCGACGGCGGCTTCTCCAAAGCCTACCAATCCACAACAGGCATCGC 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037000__ 1651 GTCATCGACGGCGGCTTCTCCAAAGCCTACCAATCCACAACAGGCATCGC 1700
BSNT_06153___ 1701 TGGCTACACGCTGCTATACAACTCCTACGGCATGCAGCTCGTCGCCCATA 1750
.|||||||||||..||||||||||.|||||||||||||||||||||||||
RBAM_037000__ 1701 CGGCTACACGCTCTTATACAACTCTTACGGCATGCAGCTCGTCGCCCATA 1750
BSNT_06153___ 1751 AACACTTCAACTCCAAGGCAGAAGTCCTAAGCACCGGAACCGACGTCTTA 1800
|||||||.|||||||||||.|||||.||.|||||||||||||||||||||
RBAM_037000__ 1751 AACACTTTAACTCCAAGGCCGAAGTGCTGAGCACCGGAACCGACGTCTTA 1800
BSNT_06153___ 1801 ACGGTGAAGCGATTAGTGGACAAAGAGCTTGAGCGGAAGAAAGTGAAGGA 1850
||.|||||.||||||||.|||||||||||.|||||||||||||||||.||
RBAM_037000__ 1801 ACAGTGAAACGATTAGTCGACAAAGAGCTGGAGCGGAAGAAAGTGAAAGA 1850
BSNT_06153___ 1851 AACGAATGTGGGTGAGGAGCTGCTGCAGGAAGTGGCTATTTTGGAGAGTT 1900
|||.||.||.|||||.||.|||.||.|.||||||||.||||||||||...
RBAM_037000__ 1851 AACAAACGTCGGTGAAGAACTGATGAAAGAAGTGGCGATTTTGGAGAAGC 1900
BSNT_06153___ 1901 TGCGGGAGTATCGGTATATGAAGTGA 1926
||||||||||||||||||||||||||
RBAM_037000__ 1901 TGCGGGAGTATCGGTATATGAAGTGA 1926
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