Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06147 and RBAM_036970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:37
# Commandline: needle
# -asequence dna-align/BSNT_06147___ahpF.1.9828.seq
# -bsequence dna-align/RBAM_036970___ahpF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06147___ahpF-RBAM_036970___ahpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06147___ahpF-RBAM_036970___ahpF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06147___ahpF
# 2: RBAM_036970___ahpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1530
# Identity: 1354/1530 (88.5%)
# Similarity: 1354/1530 (88.5%)
# Gaps: 0/1530 ( 0.0%)
# Score: 6066.0
#
#
#=======================================
BSNT_06147___ 1 TTGGTACTTGATGCAAACATCAAAGCACAATTAAATCAATATATGCAGCT 50
|||||||||||||||||.|||||||||||||||||||||||.||||||||
RBAM_036970__ 1 TTGGTACTTGATGCAAATATCAAAGCACAATTAAATCAATACATGCAGCT 50
BSNT_06147___ 51 AATTGAGAATGACATTGTTCTCAAAGTTAGCGCAGGCGAAGATGACACTT 100
|||||||||.|||||||||||||||||.|||||.||.||.||||||||||
RBAM_036970__ 51 AATTGAGAACGACATTGTTCTCAAAGTAAGCGCCGGTGACGATGACACTT 100
BSNT_06147___ 101 CTAAGGACATGCTGGCTCTCGTTGATGAGCTGGCTTCCATGTCATCGAAA 150
|||||||||||||||||||||||||.||||||||||||||||||||.|||
RBAM_036970__ 101 CTAAGGACATGCTGGCTCTCGTTGACGAGCTGGCTTCCATGTCATCTAAA 150
BSNT_06147___ 151 ATTTCAGTTGAAAAAGCTGAATTAAACAGAACGCCGAGCTTCAGTGTCAA 200
|||||||||||||||.||||||||||||||||.|||||||||||.||.||
RBAM_036970__ 151 ATTTCAGTTGAAAAAACTGAATTAAACAGAACACCGAGCTTCAGCGTTAA 200
BSNT_06147___ 201 TCGTGTCGGAGAAGACACTGGCGTGACTTTCGCCGGTATCCCTCTGGGCC 250
||||..||||||||||||.|||||.||.|||||||||.|.|||||.||||
RBAM_036970__ 201 TCGTACCGGAGAAGACACAGGCGTTACATTCGCCGGTGTTCCTCTCGGCC 250
BSNT_06147___ 251 ACGAATTCACATCATTAGTGTTGGCGTTGCTCCAAGTGAGCGGCAGACCG 300
|||||||.||||||||||||.||||.|||||.|||||.|||||||||.||
RBAM_036970__ 251 ACGAATTTACATCATTAGTGCTGGCATTGCTTCAAGTCAGCGGCAGAGCG 300
BSNT_06147___ 301 CCTAAGGTGGACCAAAAAGTCATTGATCAGGTGAAGAAGATCAGTGGTGA 350
|||||||..||.|||||.||.|||||.|||.|.|||||.|||||.||.||
RBAM_036970__ 301 CCTAAGGCTGATCAAAAGGTTATTGACCAGATTAAGAACATCAGCGGAGA 350
BSNT_06147___ 351 ATACCACTTCGAATCTTATATCAGCCTGACATGCCACAACTGTCCTGATG 400
|||||.|||.||.|||||||||||||||||.|||||||||||.|||||||
RBAM_036970__ 351 ATACCGCTTTGAGTCTTATATCAGCCTGACGTGCCACAACTGCCCTGATG 400
BSNT_06147___ 401 TTGTACAAGCTTTAAATATGATGAGCGTGCTGAACCCGAACATTACGCAC 450
|.||.|||||.|||||.||||||||||||||.||||||||.||.||.||.
RBAM_036970__ 401 TCGTCCAAGCATTAAACATGATGAGCGTGCTCAACCCGAATATCACTCAT 450
BSNT_06147___ 451 ACGATGATTGACGGTGCAGCATACAAAGCAGAAGTTGAAAGCAAAAACAT 500
||.|||||||||||.||.||||.|||||.||||||.||||||||||||||
RBAM_036970__ 451 ACAATGATTGACGGCGCGGCATTCAAAGAAGAAGTGGAAAGCAAAAACAT 500
BSNT_06147___ 501 CATGGCAGTGCCGACCGTTTACCTGAATGGCGAATCCTTCGGAAGCGGCC 550
||||||.||.|||||.||.|.|.|.||.||.|||||.|||||||||||||
RBAM_036970__ 501 CATGGCTGTTCCGACTGTATTCTTAAACGGTGAATCTTTCGGAAGCGGCC 550
BSNT_06147___ 551 GTATGACGCTTGAAGAAATTCTTGCGAAAATGGGCAGCGGCACAGATGCA 600
|||||||..|.|||||.|||||.||.|||||||||||||||.|||||||.
RBAM_036970__ 551 GTATGACCATCGAAGAGATTCTCGCAAAAATGGGCAGCGGCGCAGATGCG 600
BSNT_06147___ 601 TCTGAGTTTGCTGACAAAGAGCCGTTTGACGTTCTTGTGGTCGGAGGCGG 650
|||||||||||.||||||||||||||||||||||||||.|||||.|||||
RBAM_036970__ 601 TCTGAGTTTGCCGACAAAGAGCCGTTTGACGTTCTTGTTGTCGGCGGCGG 650
BSNT_06147___ 651 ACCTGCTGGTGCAAGTGCAGCGATCTACACTGCACGTAAAGGCATCCGCA 700
||||||.||.|||||.||.|||||||||||.||.||||||||||||||||
RBAM_036970__ 651 ACCTGCCGGCGCAAGCGCGGCGATCTACACGGCGCGTAAAGGCATCCGCA 700
BSNT_06147___ 701 CTGGTGTTGTCGCTGAGCGCTTCGGCGGACAGGTGCTCGACACCATGAGC 750
|.|||||.||||||||.|||||||||||.|||||.|||||||||||||||
RBAM_036970__ 701 CCGGTGTCGTCGCTGAACGCTTCGGCGGCCAGGTACTCGACACCATGAGC 750
BSNT_06147___ 751 ATCGAAAACTTCATCAGCGTCAAAGCGACGGAAGGACCGAAGCTTGCGGC 800
|||||||||||||||||||||||||||||.||||||||||||||.||.||
RBAM_036970__ 751 ATCGAAAACTTCATCAGCGTCAAAGCGACTGAAGGACCGAAGCTCGCTGC 800
BSNT_06147___ 801 AAGTCTTGAAGAGCATGTGAAGGAATATGATATTGATGTCATGAACCTTC 850
|||.|||||||||||.|||||.||.|||||||||||.|||||||||||||
RBAM_036970__ 801 AAGCCTTGAAGAGCACGTGAAAGATTATGATATTGACGTCATGAACCTTC 850
BSNT_06147___ 851 AGCGTGCGAAACGCCTTGAGAAGAAAGATCTGTTCGAACTTGAACTCGAA 900
||||.|||||||||||||||||.|||||.||.||||||||||||||||||
RBAM_036970__ 851 AGCGCGCGAAACGCCTTGAGAAAAAAGACCTCTTCGAACTTGAACTCGAA 900
BSNT_06147___ 901 AACGGCGCTGTTCTGAAAAGTAAAACAGTGATCCTTTCAACAGGTGCACG 950
|||||||||||.|||||||||||||||||||||||||||||||||||.||
RBAM_036970__ 901 AACGGCGCTGTACTGAAAAGTAAAACAGTGATCCTTTCAACAGGTGCCCG 950
BSNT_06147___ 951 CTGGCGCAATGTCAACGTACCAGGTGAACAAGAGTTCAAAAACAAAGGTG 1000
|||||||||||||||||||||.|||||.||||||||||||||||||||||
RBAM_036970__ 951 CTGGCGCAATGTCAACGTACCTGGTGAGCAAGAGTTCAAAAACAAAGGTG 1000
BSNT_06147___ 1001 TCGCATACTGCCCGCACTGTGATGGGCCATTGTTTGAAGGCAAAGACGTT 1050
|.||||||||||||||||||||.||.|||||||||||||||||||||||.
RBAM_036970__ 1001 TTGCATACTGCCCGCACTGTGACGGACCATTGTTTGAAGGCAAAGACGTA 1050
BSNT_06147___ 1051 GCGGTAATCGGCGGCGGAAACTCTGGTATCGAAGCAGCGATTGATCTTGC 1100
|||||.|||||||||||||||||.||.||||||||.||||||||.|||||
RBAM_036970__ 1051 GCGGTTATCGGCGGCGGAAACTCCGGAATCGAAGCGGCGATTGACCTTGC 1100
BSNT_06147___ 1101 AGGTATTGTCAATCACGTTACTGTACTAGAATTCGCGCCGGAACTGAAAG 1150
||||||.|||||||||||.|||||.||.|||||||||||.||||||||||
RBAM_036970__ 1101 AGGTATCGTCAATCACGTGACTGTGCTGGAATTCGCGCCTGAACTGAAAG 1150
BSNT_06147___ 1151 CAGACGAAGTCCTGCAAAAACGTCTCTACAGCCTGCCTAACGTTACTGTC 1200
|||||||||||||||||||||||||.|||||||||||.|||||.|||||.
RBAM_036970__ 1151 CAGACGAAGTCCTGCAAAAACGTCTTTACAGCCTGCCAAACGTCACTGTG 1200
BSNT_06147___ 1201 GTGAAAAACGCACAAACAAAAGAAATCACAGGTGATCAGAGTGTTAACGG 1250
...|||||.||||||||.||||||||||||||.||.||.|..||.|||||
RBAM_036970__ 1201 CACAAAAATGCACAAACGAAAGAAATCACAGGCGACCAAAACGTAAACGG 1250
BSNT_06147___ 1251 CATCACATATGTAGACCGCGAAACAGGCGAAGAAAAACACGTTGAACTTC 1300
|||.||.|..||.|||||.|||||||||||||||||||||||||||||||
RBAM_036970__ 1251 CATTACGTTCGTTGACCGTGAAACAGGCGAAGAAAAACACGTTGAACTTC 1300
BSNT_06147___ 1301 AAGGTGTATTCGTCCAAATCGGTCTCGTGCCAAACACAGAATGGTTAGAA 1350
||||||||||||||||||||||.||||||||.||.||||||||||||||.
RBAM_036970__ 1301 AAGGTGTATTCGTCCAAATCGGCCTCGTGCCTAATACAGAATGGTTAGAC 1350
BSNT_06147___ 1351 GGAACGGTTGAACGCAACCGCATGGGCGAAATCATCGTCGACAAACATGG 1400
|.||||||.||||||||||||||.|||||||||||||||||.||....||
RBAM_036970__ 1351 GAAACGGTCGAACGCAACCGCATCGGCGAAATCATCGTCGATAAGAGCGG 1400
BSNT_06147___ 1401 CGCAACAAGCGTACCAGGCTTATTTGCTGCCGGCGACTGCACAGACAGTG 1450
|||.||||||||.||.|||.|||||||.||.||.||||||||||||.|..
RBAM_036970__ 1401 CGCGACAAGCGTTCCCGGCCTATTTGCCGCAGGGGACTGCACAGACGGCC 1450
BSNT_06147___ 1451 CGTACAACCAAATTATTATTTCTATGGGATCAGGTGCAACTGCCGCCCTC 1500
|||||||||||||.|||||.||.|||||||||||||||||||||||..|.
RBAM_036970__ 1451 CGTACAACCAAATCATTATCTCCATGGGATCAGGTGCAACTGCCGCTTTA 1500
BSNT_06147___ 1501 GGCGCGTTTGATTACCTAATCCGTAACTGA 1530
|||||.||||||||..|.|||||.||.|.|
RBAM_036970__ 1501 GGCGCATTTGATTATTTGATCCGGAATTAA 1530
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