Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06146 and RBAM_036960

See Amino acid alignment / Visit BSNT_06146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:37
# Commandline: needle
#    -asequence dna-align/BSNT_06146___ahpC.1.9828.seq
#    -bsequence dna-align/RBAM_036960___ahpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06146___ahpC-RBAM_036960___ahpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06146___ahpC-RBAM_036960___ahpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06146___ahpC
# 2: RBAM_036960___ahpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     535/564 (94.9%)
# Similarity:   535/564 (94.9%)
# Gaps:           0/564 ( 0.0%)
# Score: 2559.0
# 
#
#=======================================

BSNT_06146___      1 ATGTCTTTAATCGGTAAAGAAGTACTTCCATTCGAAGCAAAAGCATTCAA     50
                     ||||||||||||||.|||||||||||.|||||||||||||||||.|||||
RBAM_036960__      1 ATGTCTTTAATCGGAAAAGAAGTACTGCCATTCGAAGCAAAAGCTTTCAA     50

BSNT_06146___     51 AAACGGTGAATTCATCGATGTAACAAACGAAGATTTGAAAGGCCAATGGA    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
RBAM_036960__     51 AAACGGTGAATTCATCGATGTAACAAACGAAGATTTGAAAGGTCAATGGA    100

BSNT_06146___    101 GCGTATTCTGCTTCTACCCAGCAGATTTCTCTTTCGTATGCCCAACTGAG    150
                     ||||.|||||||||||||||||.||||||||||||||.|||||.|||||.
RBAM_036960__    101 GCGTTTTCTGCTTCTACCCAGCGGATTTCTCTTTCGTTTGCCCGACTGAA    150

BSNT_06146___    151 CTTGAAGATCTTCAAGAACAATATGCTGCTCTTAAAGAATTAGGTGTTGA    200
                     ||||||||||||||||.||||||.|||||.||.|||||||||||||||||
RBAM_036960__    151 CTTGAAGATCTTCAAGGACAATACGCTGCACTGAAAGAATTAGGTGTTGA    200

BSNT_06146___    201 AGTCTACTCTGTTTCTACAGATACTCACTTCGTACACAAAGGCTGGCATG    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036960__    201 AGTATACTCTGTTTCTACAGATACTCACTTCGTACACAAAGGCTGGCATG    250

BSNT_06146___    251 ACAGCTCTGAAAAAATCAGCAAAATCACTTACGCAATGATCGGCGACCCA    300
                     |||||||||||||||||.|||||||||||||||||||||||||.||||||
RBAM_036960__    251 ACAGCTCTGAAAAAATCGGCAAAATCACTTACGCAATGATCGGTGACCCA    300

BSNT_06146___    301 TCTCAAACGATCTCTCGCAACTTCGATGTTCTTGACGAAGAAACTGGCCT    350
                     ||||||||||||||.|||||||||||.||||||||||||||||||||.||
RBAM_036960__    301 TCTCAAACGATCTCCCGCAACTTCGACGTTCTTGACGAAGAAACTGGTCT    350

BSNT_06146___    351 TGCTGACCGCGGAACATTCATCATCGATCCAGATGGCGTTATCCAAACTG    400
                     ||||||||||||||||||||||||||||||.||||||||.||||||||.|
RBAM_036960__    351 TGCTGACCGCGGAACATTCATCATCGATCCTGATGGCGTCATCCAAACAG    400

BSNT_06146___    401 TTGAAATTAATGCAGGCGGTATCGGCCGTGACGCAAGCAACCTTGTAAAC    450
                     |||||||.|||||||||||||||||||||||||||||||||||.||||||
RBAM_036960__    401 TTGAAATCAATGCAGGCGGTATCGGCCGTGACGCAAGCAACCTAGTAAAC    450

BSNT_06146___    451 AAAGTAAAAGCAGCTCAATACGTTCGTCAAAACCCAGGTGAAGTTTGCCC    500
                     |||||||||||.||||||||||||||||||||||||||||||||.|||||
RBAM_036960__    451 AAAGTAAAAGCGGCTCAATACGTTCGTCAAAACCCAGGTGAAGTCTGCCC    500

BSNT_06146___    501 GGCTAAATGGGAAGAAGGCGGCGAAACTCTTACACCTAGCCTTGATCTAG    550
                     |||||||||||||||||||||||||||.||||||||||||||||||.|.|
RBAM_036960__    501 GGCTAAATGGGAAGAAGGCGGCGAAACACTTACACCTAGCCTTGATTTGG    550

BSNT_06146___    551 TAGGTAAAATCTAA    564
                     ||||||||||||||
RBAM_036960__    551 TAGGTAAAATCTAA    564


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