Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03128 and RBAM_036850

See Amino acid alignment / Visit BSNT_03128 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence dna-align/BSNT_03128___yocG.1.9828.seq
#    -bsequence dna-align/RBAM_036850___yocG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03128___yocG-RBAM_036850___yocG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-RBAM_036850___yocG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: RBAM_036850___yocG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 604
# Identity:     461/604 (76.3%)
# Similarity:   461/604 (76.3%)
# Gaps:           8/604 ( 1.3%)
# Score: 1713.5
# 
#
#=======================================

BSNT_03128___      1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT     50
                     |||||.|..||.||.|||||.||.|||||||||||||||||.|||||..|
RBAM_036850__      1 ATGATCAACATCTTCATTGCCGAGGATCAGCAAATGCTGCTCGGCGCACT     50

BSNT_03128___     51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA    100
                     .||.|||||..|.||..|.|||||.||||||...||.||.|||.||||.|
RBAM_036850__     51 CGGTTCACTGTTGAATTTAGAAGAGGATATGACGGTTGTCGGCCAAGGCA    100

BSNT_03128___    101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAAC--GCCAGCCTGATG    148
                     |||.||||||.|||||..|.|||||.||.|||||||  ||  ||||||..
RBAM_036850__    101 CAAGCGGCCAGGATGCCATCGATTTCGTGAAAAAACATGC--GCCTGACA    148

BSNT_03128___    149 TATGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCT    198
                     |.|||.|.|||||.||||||||||||||...|.||||.||||||||.||.
RBAM_036850__    149 TCTGTCTGATGGATATTGAAATGCCCGGGGTATCAGGTCTTGAAGCGGCA    198

BSNT_03128___    199 GAGGAGCTAAAAGATACAG-GCTG-CAAAATTATCATCTTAACCACCTTC    246
                     ||.||.||.||.|  |||| |.|| .|||||.|||||.||.||.|||||.
RBAM_036850__    199 GAAGAACTCAAGG--ACAGCGGTGTGAAAATCATCATTTTGACGACCTTT    246

BSNT_03128___    247 GCCAGACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTA    296
                     |||.|..||||.||.||||||.|.||..|.|||||.||.||.|..||.||
RBAM_036850__    247 GCCCGCTCCGGCTATTTTCAGCGGGCGCTAAAAGCAGGCGTCAGCGGGTA    296

BSNT_03128___    297 TTTGTTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCG    346
                     ..||.|.||.|||||.|||||.||.|||||.|.||.|||||||||.||||
RBAM_036850__    297 CATGCTCAAGGACAGCCCGAGCGATGAGCTCGTCAGCGCCATCCGCAGCG    346

BSNT_03128___    347 TCATGAACGGAAAACGAATCTATGCACCTGAGCTGATGGAGGACTTATAC    396
                     |||||||.||||.|||..||||.||||||||..|.|||||||||.|.||.
RBAM_036850__    347 TCATGAAAGGAAGACGCGTCTACGCACCTGAATTAATGGAGGACATCTAT    396

BSNT_03128___    397 AGCGAAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGT    446
                     ||.||||..|||||.||.||.||..|.||||||||.|||||.||.|||||
RBAM_036850__    397 AGTGAAGAAAACCCGCTGACCGAACGGGAAAAAGAGGTGCTCGAGCTTGT    446

BSNT_03128___    447 GGCTGACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAA    496
                     .||.|||||.||||||||.|||||||||||..|.|..|||||||||||||
RBAM_036850__    447 CGCAGACGGAAAAAACACGAAAGAAATCGCAAACGCCCTCAGCATCAAAA    496

BSNT_03128___    497 GCGGGACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTG    546
                     ||||.||.||.||.|||||..|.||.|||||.||.||.||..|.||||||
RBAM_036850__    497 GCGGCACAGTCCGCAATTACGTTTCGATGATCCTGGATAAATTAGAAGTG    546

BSNT_03128___    547 AAAAATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAA    596
                     ||||||||||||||||||||||||.|.|||||||||||.|||||||||||
RBAM_036850__    547 AAAAATCGAATTGAAGCCATTACCAGATCAAAGGAAAAGGGCTGGTTTAA    596

BSNT_03128___    597 ATAA    600
                     .|||
RBAM_036850__    597 GTAA    600


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