Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03128 and RBAM_036850
See
Amino acid alignment /
Visit
BSNT_03128 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence dna-align/BSNT_03128___yocG.1.9828.seq
# -bsequence dna-align/RBAM_036850___yocG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03128___yocG-RBAM_036850___yocG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-RBAM_036850___yocG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: RBAM_036850___yocG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 604
# Identity: 461/604 (76.3%)
# Similarity: 461/604 (76.3%)
# Gaps: 8/604 ( 1.3%)
# Score: 1713.5
#
#
#=======================================
BSNT_03128___ 1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT 50
|||||.|..||.||.|||||.||.|||||||||||||||||.|||||..|
RBAM_036850__ 1 ATGATCAACATCTTCATTGCCGAGGATCAGCAAATGCTGCTCGGCGCACT 50
BSNT_03128___ 51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA 100
.||.|||||..|.||..|.|||||.||||||...||.||.|||.||||.|
RBAM_036850__ 51 CGGTTCACTGTTGAATTTAGAAGAGGATATGACGGTTGTCGGCCAAGGCA 100
BSNT_03128___ 101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAAC--GCCAGCCTGATG 148
|||.||||||.|||||..|.|||||.||.||||||| || ||||||..
RBAM_036850__ 101 CAAGCGGCCAGGATGCCATCGATTTCGTGAAAAAACATGC--GCCTGACA 148
BSNT_03128___ 149 TATGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCT 198
|.|||.|.|||||.||||||||||||||...|.||||.||||||||.||.
RBAM_036850__ 149 TCTGTCTGATGGATATTGAAATGCCCGGGGTATCAGGTCTTGAAGCGGCA 198
BSNT_03128___ 199 GAGGAGCTAAAAGATACAG-GCTG-CAAAATTATCATCTTAACCACCTTC 246
||.||.||.||.| |||| |.|| .|||||.|||||.||.||.|||||.
RBAM_036850__ 199 GAAGAACTCAAGG--ACAGCGGTGTGAAAATCATCATTTTGACGACCTTT 246
BSNT_03128___ 247 GCCAGACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTA 296
|||.|..||||.||.||||||.|.||..|.|||||.||.||.|..||.||
RBAM_036850__ 247 GCCCGCTCCGGCTATTTTCAGCGGGCGCTAAAAGCAGGCGTCAGCGGGTA 296
BSNT_03128___ 297 TTTGTTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCG 346
..||.|.||.|||||.|||||.||.|||||.|.||.|||||||||.||||
RBAM_036850__ 297 CATGCTCAAGGACAGCCCGAGCGATGAGCTCGTCAGCGCCATCCGCAGCG 346
BSNT_03128___ 347 TCATGAACGGAAAACGAATCTATGCACCTGAGCTGATGGAGGACTTATAC 396
|||||||.||||.|||..||||.||||||||..|.|||||||||.|.||.
RBAM_036850__ 347 TCATGAAAGGAAGACGCGTCTACGCACCTGAATTAATGGAGGACATCTAT 396
BSNT_03128___ 397 AGCGAAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGT 446
||.||||..|||||.||.||.||..|.||||||||.|||||.||.|||||
RBAM_036850__ 397 AGTGAAGAAAACCCGCTGACCGAACGGGAAAAAGAGGTGCTCGAGCTTGT 446
BSNT_03128___ 447 GGCTGACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAA 496
.||.|||||.||||||||.|||||||||||..|.|..|||||||||||||
RBAM_036850__ 447 CGCAGACGGAAAAAACACGAAAGAAATCGCAAACGCCCTCAGCATCAAAA 496
BSNT_03128___ 497 GCGGGACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTG 546
||||.||.||.||.|||||..|.||.|||||.||.||.||..|.||||||
RBAM_036850__ 497 GCGGCACAGTCCGCAATTACGTTTCGATGATCCTGGATAAATTAGAAGTG 546
BSNT_03128___ 547 AAAAATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAA 596
||||||||||||||||||||||||.|.|||||||||||.|||||||||||
RBAM_036850__ 547 AAAAATCGAATTGAAGCCATTACCAGATCAAAGGAAAAGGGCTGGTTTAA 596
BSNT_03128___ 597 ATAA 600
.|||
RBAM_036850__ 597 GTAA 600
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.