Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06114 and RBAM_036820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:36
# Commandline: needle
# -asequence dna-align/BSNT_06114___htpG.1.9828.seq
# -bsequence dna-align/RBAM_036820___htpG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06114___htpG-RBAM_036820___htpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06114___htpG-RBAM_036820___htpG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06114___htpG
# 2: RBAM_036820___htpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1896
# Identity: 1531/1896 (80.7%)
# Similarity: 1531/1896 (80.7%)
# Gaps: 30/1896 ( 1.6%)
# Score: 6167.0
#
#
#=======================================
BSNT_06114___ 1 GTGGCGAAAAAAGAGTTTAAAGCAGAGTCTAAACGCTTGCTGGATATGAT 50
|||..|||||||.|||||||||||||.||.||.||.||||||||.|||||
RBAM_036820__ 1 GTGCGGAAAAAAAAGTTTAAAGCAGAATCCAAGCGATTGCTGGACATGAT 50
BSNT_06114___ 51 GATTAACTCCATTTATACCCAAAAAGAAATTTTCCTGCGCGAGTTAATCT 100
|||||||||||||||.||.||.||.||||||||.||.|||||||||||.|
RBAM_036820__ 51 GATTAACTCCATTTACACGCAGAAGGAAATTTTTCTCCGCGAGTTAATTT 100
BSNT_06114___ 101 CCAATTCGAGTGATGCGATTGACAAAATCTATTACAAAGCGCTTACGGAC 150
||||..||||.||||||||||||||||||||||||||.|||.|.||.||.
RBAM_036820__ 101 CCAACGCGAGCGATGCGATTGACAAAATCTATTACAAGGCGTTAACCGAT 150
BSNT_06114___ 151 GATGCGCTTACGTTTGATAAAGACAGTTACTACATAAAGGTCGCAGCTGA 200
|||.|..|.|||||||||.||||||.||||||||||||.||..|.||.||
RBAM_036820__ 151 GATTCATTAACGTTTGATCAAGACAATTACTACATAAAAGTGACGGCGGA 200
BSNT_06114___ 201 CAAAGATGCGAGAACATTAACCATCTCTGATACGGGGATCGGAATGACAA 250
||||||.||||||||..|.|||.||.|.||.||.||.|||||.|||||||
RBAM_036820__ 201 CAAAGAAGCGAGAACGCTCACCGTCACAGACACCGGTATCGGGATGACAA 250
BSNT_06114___ 251 AGGATGAGCTTGAACAGCATCTTGGAACAATTGCAAAAAGCGGTTCCCTC 300
|.||.|||||||||||||||||.||.||||||||.|||||||||||.|||
RBAM_036820__ 251 AAGACGAGCTTGAACAGCATCTCGGCACAATTGCGAAAAGCGGTTCACTC 300
BSNT_06114___ 301 GCGTTTAAAAAGGAAAACGAGCT-GAAAGACGGACATGACATTATCGGGC 349
||.||.||..|.|||||.|| || |||||||||.||||||||||||||.|
RBAM_036820__ 301 GCTTTCAAGCAAGAAAATGA-CTCGAAAGACGGCCATGACATTATCGGCC 349
BSNT_06114___ 350 AGTTCGGTGTCGGTTTTTACGCGGCATTTATGGTTGCCGATGTCGTGACA 399
|||||||.|||||.|||||.|||||.||||||||.||.|||...||.||.
RBAM_036820__ 350 AGTTCGGCGTCGGATTTTATGCGGCGTTTATGGTGGCTGATAAAGTCACG 399
BSNT_06114___ 400 GTCATCAGTAAAGCGCTTGGCAGCGAAGAGGCTTATAAATGGGAGTCTGC 449
||.|..|||||.|||||.|||||.||.|||||.|||..|||||||||.|.
RBAM_036820__ 400 GTGAAAAGTAAGGCGCTCGGCAGTGACGAGGCGTATGTATGGGAGTCGGA 449
BSNT_06114___ 450 GGGTGCAGACGGCTATACAATTGAGCCGTGTGAAAAGGATTCTGTCGGTA 499
.||.||.|.||||||.||.||.|.|||||||||.|||||..|..||||||
RBAM_036820__ 450 AGGGGCTGCCGGCTACACGATCGCGCCGTGTGACAAGGAAACCATCGGTA 499
BSNT_06114___ 500 CAGACATTATCCTGAAAATCAAAGAGAACACAGAAGATGACAGCTATGAC 549
|.||.||.|.|.|||||||.|||||.||||||||||||||.||||||||.
RBAM_036820__ 500 CGGAAATCACCTTGAAAATAAAAGAAAACACAGAAGATGAAAGCTATGAT 549
BSNT_06114___ 550 GAATTCTTAGAAGAATATCGTTTAAAAGCGATCATCAAGAAGTACTCCGA 599
||.||.||||||.|.||.||..|.|||||||||.|.||.||||||||.||
RBAM_036820__ 550 GAGTTTTTAGAAAACTACCGCATCAAAGCGATCGTGAAAAAGTACTCTGA 599
BSNT_06114___ 600 CTTCATTCGCTACCCGATCAAAATGGATACGACCATTAATAAGCCGAAGG 649
.||.||.||||||||||||||||||||...|||..|.||.||||||||.|
RBAM_036820__ 600 TTTTATCCGCTACCCGATCAAAATGGAAGAGACGGTCAACAAGCCGAAAG 649
BSNT_06114___ 650 AAGGCAGCGAAAATGAATTCGAAGAGGTGCAGGAAGAGCAGACGGTCAAC 699
|.||||||||.||.|||||.|||||.||.||||||||.||||||||||||
RBAM_036820__ 650 AGGGCAGCGAGAACGAATTTGAAGAAGTTCAGGAAGAACAGACGGTCAAC 699
BSNT_06114___ 700 AGCATGGTGCCGATCTGGAGAAAAAACAAAAGCGAGCTGACAGATGAGGA 749
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_036820__ 700 AGCATGGTGCCGATCTGGAGAAAAAACAAAAGCGAGCTGACGGATGAGGA 749
BSNT_06114___ 750 TTATGAAAAATTCTATGCTGAAAAGCATTACGGGTTTGATAAACCGCTGA 799
|||.||....||.||.||.||.|||||||||||.||||||||||||||||
RBAM_036820__ 750 TTACGAGGCTTTTTACGCCGAGAAGCATTACGGTTTTGATAAACCGCTGA 799
BSNT_06114___ 800 CACACGTTCATATCAGTGTGGATGGAGCGGTTCGCTACAACGCGATTCTA 849
|.||.||.||||||||.||.|||||||||||.||||||||..|||||.|.
RBAM_036820__ 800 CCCATGTGCATATCAGCGTCGATGGAGCGGTGCGCTACAATTCGATTTTG 849
BSNT_06114___ 850 TTCATCCCTGAAAACATGCCGTTTGACTACTATTCCAAGGAATATGAGAA 899
||.||.||.||||||||||||||||||||.|||.|.|||||||..||.||
RBAM_036820__ 850 TTTATTCCGGAAAACATGCCGTTTGACTATTATACGAAGGAATTCGAAAA 899
BSNT_06114___ 900 AGGCTTGGAGCTGTATTCCAATGGCGTGCTGATCATGAATAAGTGCGCAG 949
|||.|||||||||||.|||||.|||||||||||||||||.||.|||||.|
RBAM_036820__ 900 AGGATTGGAGCTGTACTCCAACGGCGTGCTGATCATGAACAAATGCGCCG 949
BSNT_06114___ 950 ACCTGCTACCGGACCACTTCAGCTTTGTGAAGGGCATGGTCGATTCCGAG 999
|||||||.||||||||.|||||||||||.||.||||||||.|||||.|||
RBAM_036820__ 950 ACCTGCTTCCGGACCATTTCAGCTTTGTAAAAGGCATGGTGGATTCTGAG 999
BSNT_06114___ 1000 GATCTGTCGCTGAATATTTCCAGAGAAATGCTGCAGCATGACCGCCAGCT 1049
||||||||||||||.|||||||||||.|||||||||||.|||||||||||
RBAM_036820__ 1000 GATCTGTCGCTGAACATTTCCAGAGAGATGCTGCAGCACGACCGCCAGCT 1049
BSNT_06114___ 1050 GAAGCTGATCGCGAAAAACATCAGCAAGAAAATCAAAAGCGAGCTGCAA- 1098
|||||||||.|||||||||||||..||.|||||||||..|||||| |||
RBAM_036820__ 1050 GAAGCTGATTGCGAAAAACATCAATAAAAAAATCAAAGCCGAGCT-CAAG 1098
BSNT_06114___ 1099 AGCCTGTTGAA----AAAAGACCGCGAGAAATACGAGACGTTCTACAAGT 1144
||||||.|||| |||| |.||.||||||||..|.|||||..|.|
RBAM_036820__ 1099 AGCCTGCTGAAGAACAAAA----GGGAAAAATACGAATCTTTCTATGAAT 1144
BSNT_06114___ 1145 CGTTTGGCAGACAGCTGAAATTCGGCGTGTATAATGATTTTGGCGCGAAT 1194
|.||.|||||||||||||||||||||||.|||||||||||.|||||||||
RBAM_036820__ 1145 CTTTCGGCAGACAGCTGAAATTCGGCGTCTATAATGATTTCGGCGCGAAT 1194
BSNT_06114___ 1195 AAGGATCAATTGAAGGATCTCCTATTATTCTACTCTTCAAAAGAGAAAAA 1244
||.||...|||.||.|||||.||..|.|||||.||.||.||.||||||||
RBAM_036820__ 1195 AAAGACGTATTAAAAGATCTGCTTCTCTTCTATTCATCTAAGGAGAAAAA 1244
BSNT_06114___ 1245 ACTGGTCAGCT-TAGACGAGTATGTTTCCAGAATGCCAGAGGAGCAAAAA 1293
.||.|||| || |.|||||.|||||.|||||||||||.|||||.||||||
RBAM_036820__ 1245 GCTCGTCA-CTCTGGACGAATATGTGTCCAGAATGCCTGAGGATCAAAAA 1293
BSNT_06114___ 1294 TACATTTATTACGCGACCGGTGATTCTTACGACCGCATTGAGAAACTGCC 1343
||.||.|||||||||.||||.|||||.||.||.||.|||||.||.|||||
RBAM_036820__ 1294 TATATCTATTACGCGTCCGGCGATTCATATGAGCGGATTGAAAAGCTGCC 1343
BSNT_06114___ 1344 GCAAACGGAAATGGTGGCGGACAAAGGCTATGAAATCCTCTACTTTACTG 1393
||||||.||||||||.||||||||||||||.|||||..|.||.||.||.|
RBAM_036820__ 1344 GCAAACTGAAATGGTCGCGGACAAAGGCTACGAAATTTTATATTTCACGG 1393
BSNT_06114___ 1394 AGGACATCGATGAGTTTGCAATTAAAATGCTG----GCTTCTTATCAGGA 1439
||||.||.|||||.||.||.||.||||||||| || ||..||||
RBAM_036820__ 1394 AGGATATTGATGAATTCGCGATCAAAATGCTGACAAGC----TACGAGGA 1439
BSNT_06114___ 1440 AAAAGAATTCAAGTCCGTATCAAGCGGAGACCTTGGCATAGACACGGATG 1489
|||||||||||||||||||||.||||..|||.|.|||||.||||..||||
RBAM_036820__ 1440 AAAAGAATTCAAGTCCGTATCCAGCGCCGACTTAGGCATCGACAGTGATG 1489
BSNT_06114___ 1490 AGGATCAAAAGCAGTCCGAGGAAGAGGAAAACAAGTATAAGGATCTGTTT 1539
|||||.||||||||.||||.|..||.||||||.|.|||||.||.|||||
RBAM_036820__ 1490 AGGATGAAAAGCAGACCGAAGCCGAAGAAAACGAATATAAAGACCTGTT- 1538
BSNT_06114___ 1540 AAGGAA---ATGAATAACATTCTGTCAGACAAAGTGAAAAACGTCAGAAT 1586
.||| |||||..|.|||||..|.||.|||||.||.|||||||||..
RBAM_036820__ 1539 --CGAAAGCATGAAAGAGATTCTTGCGGATAAAGTAAAGAACGTCAGAGC 1586
BSNT_06114___ 1587 CTCAAAACGGCTTAAATCACATCCAGTCTGCCTTGCTGCTGACGGCGAAG 1636
.||.|||||..|.|||||.|||||.||.|||.||||..|.||||||||||
RBAM_036820__ 1587 ATCGAAACGTTTAAAATCCCATCCGGTATGCTTTGCGACAGACGGCGAAG 1636
BSNT_06114___ 1637 TGACAATTGAGATGGAAAAAATCTTAAACGCAATGCCTGACAGCCAAAAT 1686
||||.||.||.|||||.|||.|.||||||||.||||||||||||||..|.
RBAM_036820__ 1637 TGACGATCGAAATGGAGAAAGTGTTAAACGCCATGCCTGACAGCCAGCAG 1686
BSNT_06114___ 1687 GTGAAGGCGGAAAAAGTGCTGGAAATCAACCCGAATCACGAGGTATTCCA 1736
||.||.|||||||||||||||||||||||||||||||||||.||.||..|
RBAM_036820__ 1687 GTCAAAGCGGAAAAAGTGCTGGAAATCAACCCGAATCACGAAGTGTTTGA 1736
BSNT_06114___ 1737 AACGCTGCAGGACGCGTTTGAACAAGATAAAGAGAAGCTGAGC-CTGTAC 1785
.|||.|..||.|||||...|.|||||||...||.|||||| || .|.|||
RBAM_036820__ 1737 GACGTTAAAGAACGCGCACGGACAAGATCGGGAAAAGCTG-GCATTATAC 1785
BSNT_06114___ 1786 ACAAACCTTCTGTACAATCAGGCGCTTCTCATTGAAGGCCTGCCGATTCA 1835
|||||.|||||.|||||||||||||||||.||||||||.||||||||.||
RBAM_036820__ 1786 ACAAATCTTCTCTACAATCAGGCGCTTCTGATTGAAGGGCTGCCGATCCA 1835
BSNT_06114___ 1836 GGACCCTGTTGAATTTACGAACAATATTTGCAAGGTCATGGTGTAA 1881
.||.||.||.|||||||||||..|.||||||||.||.|||||.|.|
RBAM_036820__ 1836 TGATCCGGTCGAATTTACGAATGACATTTGCAAAGTTATGGTATGA 1881
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