Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06100 and RBAM_036780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence dna-align/BSNT_06100___mmsA.1.9828.seq
# -bsequence dna-align/RBAM_036780___iolA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06100___mmsA-RBAM_036780___iolA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06100___mmsA-RBAM_036780___iolA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06100___mmsA
# 2: RBAM_036780___iolA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1469
# Identity: 1197/1469 (81.5%)
# Similarity: 1197/1469 (81.5%)
# Gaps: 10/1469 ( 0.7%)
# Score: 4894.0
#
#
#=======================================
BSNT_06100___ 1 ATGGCAGAAATCAGAAAATTAAAAAACTACATCAACGGTGAATGGGTTGA 50
||||||||.|||||||||.|.||||||||||||||.||||||||||||||
RBAM_036780__ 1 ATGGCAGAGATCAGAAAACTGAAAAACTACATCAATGGTGAATGGGTTGA 50
BSNT_06100___ 51 AAGCAAAACAGATCAATATGAAGATGTCGTCAATCCGGCGACGAAAGAAG 100
|||.||.|||||||||||||||||.||..||||||||||.||.|||||||
RBAM_036780__ 51 AAGTAAGACAGATCAATATGAAGACGTTATCAATCCGGCTACAAAAGAAG 100
BSNT_06100___ 101 TACTATGCCAAGTGCCGATTTCTACAAAAGAGGATATTGATTACGCAG-- 148
|..|.|||||.||.|||||||||||....||||||.|.||.|||||.|
RBAM_036780__ 101 TGATGTGCCAGGTTCCGATTTCTACGCGGGAGGATGTGGAATACGCCGTC 150
BSNT_06100___ 149 CGCAAACGGCGGCTGAAGCGTTTGAAACATGGTCAAAGGTGGCGGTTCCG 198
||| .|.|||.|.||.||.|||.||||||||||||||..|||.||.|||
RBAM_036780__ 151 CGC--TCAGCGTCAGAGGCATTTCAAACATGGTCAAAGACGGCAGTGCCG 198
BSNT_06100___ 199 CGCCGTGCCAGAATTCTATTTAACTTTCAGCAGCTGCTGTCCCAGC---A 245
||||||||.||||||||||||||||.|||||||||.|| ||||| |
RBAM_036780__ 199 CGCCGTGCGAGAATTCTATTTAACTATCAGCAGCTTCT---CCAGCAGAA 245
BSNT_06100___ 246 TAAAGAAGAACTGGCTCATCTGATTACCATTGAAAACGGAAAAAACACAA 295
.||||||||.||.||.|.|||||||||..|.||||||||.||||||||.|
RBAM_036780__ 246 CAAAGAAGAGCTTGCCCGTCTGATTACTTTGGAAAACGGTAAAAACACGA 295
BSNT_06100___ 296 AAGAAGCTTTAGGTGAAGTGGGACGCGGGATTGAAAACGTAGAGTTCGCC 345
..||.||..|.|||||||||||||||||.|||||||||||.||.|||||.
RBAM_036780__ 296 CGGAGGCACTCGGTGAAGTGGGACGCGGAATTGAAAACGTCGAATTCGCA 345
BSNT_06100___ 346 GCTGGAGCACCTTCCCTGATGATGGGTGACTCACTTGCTTCCATCGCAAC 395
||.||.||.||.||.||.||||||||.||.||||||||.||||||||.||
RBAM_036780__ 346 GCGGGCGCGCCGTCACTCATGATGGGCGATTCACTTGCCTCCATCGCGAC 395
BSNT_06100___ 396 GGACGTTGAAGCGGCGAACTACCGTTACCCAATCGGAGTTGTCGGCGGAA 445
|||.||.||.||||||||||||||.||.||.|||||.||.||||||||.|
RBAM_036780__ 396 GGATGTAGAGGCGGCGAACTACCGCTATCCGATCGGGGTGGTCGGCGGTA 445
BSNT_06100___ 446 TCGCGCCATTCAACTTCCCGATGATGGTTCCTTGCTGGATGTTCCCGATG 495
||||.||.||||||||||||||||||||.||.||||||||||||||||||
RBAM_036780__ 446 TCGCACCGTTCAACTTCCCGATGATGGTCCCGTGCTGGATGTTCCCGATG 495
BSNT_06100___ 496 GCGATCGCGCTCGGCAACACATTTATTTTAAAGCCATCTGAGCGGACTCC 545
|||||..||.|.||.||.||.||.|||.|.|||||.||||||||.||.||
RBAM_036780__ 496 GCGATTTCGTTAGGAAATACGTTCATTCTGAAGCCGTCTGAGCGCACGCC 545
BSNT_06100___ 546 GCTGTTAACAGAGAAATTGGTTGAGCTTTTTGAAAAAGCGGGCCTTCCGA 595
|||||||||.||.|||.|||..|||||.||||||.|.||.||||||||||
RBAM_036780__ 546 GCTGTTAACGGAAAAACTGGCAGAGCTGTTTGAACAGGCCGGCCTTCCGA 595
BSNT_06100___ 596 AAGGGGTATTCAACGTCGTATACGGTGCGCATGACGTTGTGAACGGCATC 645
|.||.||.|||||.|||||..||||.|||||||||||.||.||||||.|.
RBAM_036780__ 596 AGGGCGTCTTCAATGTCGTGCACGGCGCGCATGACGTCGTAAACGGCGTT 645
BSNT_06100___ 646 CTCGAGCATCCCGAAATTAAAGCGATTTCATTTGTAGGCTCCAAGCCAGT 695
||.||.|||||.||.||||||||.||.|||||.||.||.||.||.||.||
RBAM_036780__ 646 CTTGAACATCCGGATATTAAAGCCATCTCATTCGTCGGTTCAAAACCTGT 695
BSNT_06100___ 696 CGGCGAATACGTCTACAAAAAAGGAAGCGAACACTTAAAACGCGTTCAAT 745
||||||.||.||.|.|||||||||.||||||||.||.||.|||||.|||.
RBAM_036780__ 696 CGGCGAGTATGTTTTCAAAAAAGGCAGCGAACATTTGAAGCGCGTGCAAG 745
BSNT_06100___ 746 CTCTGACTGGTGCGAAAAACCATACGATTGTCTTGAACGATGCGAATCTT 795
|..|.||.||.|||||||||||||||||.||.||.||.||.||..|.|||
RBAM_036780__ 746 CGTTAACGGGCGCGAAAAACCATACGATCGTGTTAAATGACGCCCACCTT 795
BSNT_06100___ 796 GAAGACACGGTCACAAACATCGTCGGAGCTGCCTTCGGTTCTGCCGGTGA 845
|||||.|||||.||||||||..||||.||.||.||||||||.||.||.||
RBAM_036780__ 796 GAAGATACGGTGACAAACATTATCGGTGCGGCATTCGGTTCGGCAGGAGA 845
BSNT_06100___ 846 ACGCTGCATGGCTTGTGCGGTTGTGACAGTTGAAGAAGGAATCGCCGATG 895
.|||||||||||.||.|||||||||||.||||||||.|||||||||||||
RBAM_036780__ 846 GCGCTGCATGGCATGCGCGGTTGTGACGGTTGAAGAGGGAATCGCCGATG 895
BSNT_06100___ 896 AATTTATGGCGAAGCTGCAGGAAAAAGTGGCGGACATTAAAATCGGTAAC 945
|.|||||||||||..|.||||||||||..||||||||.||.|||||.|||
RBAM_036780__ 896 AGTTTATGGCGAAATTACAGGAAAAAGCAGCGGACATCAAGATCGGAAAC 945
BSNT_06100___ 946 GGCCTTGATGACGGCGTGTTCTTAGGACCGGTGATTCGCGAAGACAACAA 995
||.||.||||||||||||||||||||.|||||.||.|||||.||||||||
RBAM_036780__ 946 GGACTGGATGACGGCGTGTTCTTAGGCCCGGTCATCCGCGAGGACAACAA 995
BSNT_06100___ 996 GAAGCGCACGCTCAGCTATATCGAAAAAGGCCTTGAAGAAGGTGCCAGAC 1045
.||.|||||||.|||||||||.|||||||||.|.||||||||.||.||||
RBAM_036780__ 996 AAAACGCACGCACAGCTATATTGAAAAAGGCATCGAAGAAGGAGCGAGAC 1045
BSNT_06100___ 1046 TCGTATGTGACGGACGTGAAAATGTGTCTGACGACGGCTACTTTGTCGGC 1095
|..|.||||||||.||||||||.|...|.||.||||||||.||.|||||.
RBAM_036780__ 1046 TTCTTTGTGACGGGCGTGAAAACGCAACGGAAGACGGCTATTTCGTCGGA 1095
BSNT_06100___ 1096 CCGACGATCTTTGACAATGTCACAACAGAGATGACGATCTGGAAAGATGA 1145
||||||||.||||||||.||.||.||.||.||||||||||||||||||||
RBAM_036780__ 1096 CCGACGATTTTTGACAACGTGACGACGGATATGACGATCTGGAAAGATGA 1145
BSNT_06100___ 1146 AATTTTCGCTCCGGTCTTATCTGTCATCCGTGTGAAAAACCTGAAAGAAG 1195
|||.||.||.||.||..|.||.||||||||.|||||||||.|.|||||||
RBAM_036780__ 1146 AATCTTTGCGCCCGTTCTGTCGGTCATCCGCGTGAAAAACTTAAAAGAAG 1195
BSNT_06100___ 1196 CGATTGAAATCGCCAATAAGTCTGAGTTTGCGAACGGTGCCTGCTTGTTC 1245
||.|.||.||||||||..|||||||.|||||||||||.||.||..|||||
RBAM_036780__ 1196 CGGTGGACATCGCCAACCAGTCTGAATTTGCGAACGGCGCGTGTCTGTTC 1245
BSNT_06100___ 1246 ACATCCAATTCAAACGCAATCCGCTACTTCCGTGAAAACATTGATGCGGG 1295
||.||.|||.|.|||||.|||||||||||||||||.||.|||||.|||||
RBAM_036780__ 1246 ACTTCAAATGCGAACGCGATCCGCTACTTCCGTGAGAATATTGACGCGGG 1295
BSNT_06100___ 1296 AATGCTAGGCATCAACCTTGGTGTGCCGGCTCCAATGGCGTTCTTCCCAT 1345
||||||.||||||||||||||.||.|||||.||.|||||.||||||||.|
RBAM_036780__ 1296 AATGCTCGGCATCAACCTTGGCGTCCCGGCGCCGATGGCATTCTTCCCGT 1345
BSNT_06100___ 1346 TCTCAGGTTGGAAATCTTCATTCTTTGGAACGCTGCATGCGAACGGAAAA 1395
||||.||.|||||.|||||.|||||.||.||..||||.||.|||||||||
RBAM_036780__ 1346 TCTCTGGCTGGAAGTCTTCTTTCTTCGGCACATTGCACGCAAACGGAAAA 1395
BSNT_06100___ 1396 GACAGCGTCGACTTCTATACACGTAAAAAAGTGGTAACGGCAAGATTTCC 1445
||||||||||||||||||||||||||||||||.||.||||||.|||..||
RBAM_036780__ 1396 GACAGCGTCGACTTCTATACACGTAAAAAAGTCGTGACGGCACGATACCC 1445
BSNT_06100___ 1446 GGCACCTGATTTCAACTAA 1464
|.|.|||||.|||||.|.|
RBAM_036780__ 1446 GTCTCCTGACTTCAATTGA 1464
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