Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06097 and RBAM_036750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence dna-align/BSNT_06097___iolD.1.9828.seq
# -bsequence dna-align/RBAM_036750___iolD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06097___iolD-RBAM_036750___iolD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06097___iolD-RBAM_036750___iolD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06097___iolD
# 2: RBAM_036750___iolD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1920
# Identity: 1530/1920 (79.7%)
# Similarity: 1530/1920 (79.7%)
# Gaps: 12/1920 ( 0.6%)
# Score: 6094.0
#
#
#=======================================
BSNT_06097___ 1 GTGGGTAAGAAAATTCGCTTAACAACAGCACAGGCGCTGATTAAATTCTT 50
||||||||||.||||||||||||.||||||||.|||||||||.|||||||
RBAM_036750__ 1 GTGGGTAAGACAATTCGCTTAACGACAGCACAAGCGCTGATTCAATTCTT 50
BSNT_06097___ 51 AAACCAGCAGTACATCCATGTTGATGGAAAGGAAGAGCCTTTTGTCGAAG 100
.||||.|||||||||.||||||||.|||||.||||||||.||.||.||.|
RBAM_036750__ 51 GAACCGGCAGTACATTCATGTTGACGGAAAAGAAGAGCCGTTCGTTGAGG 100
BSNT_06097___ 101 GGATTTTCACAATTTTCGGTCATGGAAACGTATTAGGGATCGGGCAAGCG 150
|.||.|||||.||||||||.||.|||||.||.||.|||||||||||.|||
RBAM_036750__ 101 GCATCTTCACGATTTTCGGCCACGGAAATGTGTTGGGGATCGGGCAGGCG 150
BSNT_06097___ 151 CTTGAGCAGGATGCAGGCCATTTGAAAGTCTATCAAGGGAAAAATGAACA 200
|||||||||||.||.||.||..||||||||||||||||.|||||.|||||
RBAM_036750__ 151 CTTGAGCAGGACGCCGGGCACCTGAAAGTCTATCAAGGCAAAAACGAACA 200
BSNT_06097___ 201 AGGAATGGCGCATGCGGCCATGGCGTACAGCAAGCAAATGCTGAGAAGAA 250
|||.|||||||||||.||.|||||.|||||||||||.|||||||||||||
RBAM_036750__ 201 AGGCATGGCGCATGCCGCGATGGCATACAGCAAGCAGATGCTGAGAAGAA 250
BSNT_06097___ 251 AAATATATGCGGTGTCTACATCCGTCGGACCTGGAGCGGCTAACTTGGTG 300
||||.||.|||||.||.|||||.|||||.||.||.||.|||||||||..|
RBAM_036750__ 251 AAATTTACGCGGTATCGACATCGGTCGGTCCGGGTGCCGCTAACTTGACG 300
BSNT_06097___ 301 GCGGCAGCCGGCACTGCATTGGCAAACAATATCCCAGTTCTCTTGATTCC 350
||.||.||.||.||.||..||||.||..|||||||.||.||..||.||||
RBAM_036750__ 301 GCTGCCGCGGGTACGGCGCTGGCCAATCATATCCCGGTGCTGCTGCTTCC 350
BSNT_06097___ 351 GGCAGACACATTTGCGACAAGACAGCCAGACCCTGTACTGCAGCAAATGG 400
|||.||.||.||||||||.||.|||||.|||||.||.||.|||||..|||
RBAM_036750__ 351 GGCCGATACCTTTGCGACGAGGCAGCCTGACCCGGTGCTTCAGCAGGTGG 400
BSNT_06097___ 401 AGCAAGAATACAGCGCGGCGATTACGACAAACGATGCATTGAAACCTGTA 450
||||.||||||||.||.||..|.||.|||||||||||.||.||.||.||.
RBAM_036750__ 401 AGCAGGAATACAGTGCCGCCGTCACAACAAACGATGCGTTAAAGCCCGTG 450
BSNT_06097___ 451 TCGAGATACTGGGACCGCATTACGCGCCCTGAGCAGCTGATGAGCAGTTT 500
||..|.||.|||||.|||||.||.|||||.|||||||||||||||||.||
RBAM_036750__ 451 TCCCGCTATTGGGATCGCATCACCCGCCCCGAGCAGCTGATGAGCAGCTT 500
BSNT_06097___ 501 GCTGCGCGCGTTTGAAGTCATGACTGATCCGGCAAAAGCAGGTCCGGCAA 550
..|.||.|||||||||||.|||||.||||||||||||||.||.|||||.|
RBAM_036750__ 501 AATCCGGGCGTTTGAAGTGATGACAGATCCGGCAAAAGCGGGCCCGGCGA 550
BSNT_06097___ 551 CGATTTGTATTTCTCAGGATGTTGAAGGGGAAGCATACGATTTTGATGAA 600
|.||.||.||||||||||||||.||.||.|||||||..||||||||||||
RBAM_036750__ 551 CCATCTGCATTTCTCAGGATGTAGAGGGAGAAGCATTTGATTTTGATGAA 600
BSNT_06097___ 601 AGTTTCTTCGTCAAACGGGTTCACTATATTGATCGCATGCAGCCGAGCGA 650
||.|||||.|..|||||.|||||.||.|||||.||.||||||||||||||
RBAM_036750__ 601 AGCTTCTTTGAAAAACGCGTTCATTACATTGACCGGATGCAGCCGAGCGA 650
BSNT_06097___ 651 GCGCGAGCTTCAAGGTGCGGCGGAGCTGATTAAATCCAGCAAAAAA---- 696
|||.||.||..||||.||.|||||....|||| ||||.|..|
RBAM_036750__ 651 GCGTGAACTGAAAGGCGCCGCGGAAAGAATTA-----AGCAGAGCAGCCG 695
BSNT_06097___ 697 -CCTGTGATTCTCGTCGGCGGAGGCGCAAAATATTCCGGTGCGCGCGATG 745
||.||.|||.|.||.|||||.|||||.||.||.|||||.|||||.||.|
RBAM_036750__ 696 TCCCGTCATTTTAGTGGGCGGCGGCGCGAAGTACTCCGGCGCGCGTGAGG 745
BSNT_06097___ 746 AATTGGTTGCCATTTCTGAAGCCTATAACATTCCGTTAGTTGAAACACAG 795
||||..|.||..||||||||.|.||...|||||||.|.||.|||||.|||
RBAM_036750__ 746 AATTAATCGCGCTTTCTGAAACATACGGCATTCCGCTTGTCGAAACGCAG 795
BSNT_06097___ 796 GCAGGAAAGTCTACTGTTGAGGCAGATTTTGCGAACAACCTTGGCGGAAT 845
||.||.|||||.||.|||||.||.|||||.||.|||||.||.|||||.||
RBAM_036750__ 796 GCCGGCAAGTCAACGGTTGAAGCCGATTTCGCCAACAATCTGGGCGGCAT 845
BSNT_06097___ 846 GGGCATCACAGGTACACTTGCGGCAAACAAAGCGGCCCGCCAAGCTGATT 895
|||||||||.||.||.||.||.|||||||||||.||||||||.||||||.
RBAM_036750__ 846 GGGCATCACGGGCACCCTCGCCGCAAACAAAGCCGCCCGCCAGGCTGATC 895
BSNT_06097___ 896 TGATTATCGGCATCGGCACAAGGTATACAGATTTTGCGACATCCTCTAAG 945
||||.|||||..||||||||.||||.||.||.||||||||||||||.||.
RBAM_036750__ 896 TGATCATCGGTGTCGGCACACGGTACACGGACTTTGCGACATCCTCGAAA 945
BSNT_06097___ 946 ACCGCTTTTGATTTTGATAAAGCGAAGTTTTTGAACATTAACGTCAGCCG 995
||.||.|||||||||||.|||||.||.||||||||.||.|||||||||||
RBAM_036750__ 946 ACGGCGTTTGATTTTGACAAAGCAAAATTTTTGAATATCAACGTCAGCCG 995
BSNT_06097___ 996 AATGCAGGCGTATAAACTTGATGCATTCCAAGTGGTAGCGGATGCGAAAG 1045
.||||||||.||.||.|||||.||.||.||.||.|||||.||||||||||
RBAM_036750__ 996 CATGCAGGCTTACAAGCTTGACGCGTTTCAGGTCGTAGCCGATGCGAAAG 1045
BSNT_06097___ 1046 TGACGCTTGGCAAACTGCACGGCTTGCTTGAAGGCTATGAGAGCGAGTTC 1095
||||||||||||..|||||||||||..|.||.||.|||.|.||.|..|||
RBAM_036750__ 1046 TGACGCTTGGCAGGCTGCACGGCTTATTAGACGGATATAAAAGTGCATTC 1095
BSNT_06097___ 1096 GGCACAACGTTCCGGGAGCT-GAAGGACGAATGGCTAGCTGAACGCGAAC 1144
|||||..||.|....|| || |||.||.|||||||..||||||||.||.|
RBAM_036750__ 1096 GGCACGGCGATTAAAGA-CTGGAAAGATGAATGGCAGGCTGAACGGGACC 1144
BSNT_06097___ 1145 GTCTCAGCAAAGTGACGTTTAAGCGGGAAGCATTTGATCCGGAAATCAAA 1194
|.|||.||||.||.||.||||..||.||.||.||.||.||||||||.|||
RBAM_036750__ 1145 GGCTCGGCAAGGTCACTTTTACACGTGACGCGTTCGAACCGGAAATTAAA 1194
BSNT_06097___ 1195 AATCATTTTTCTCAAGAGGTCCTGAATGAATATGCTGACGCGTTGAATAC 1244
||.|||||.||.||.||.||..|.||.||.|||||.||||||.|....||
RBAM_036750__ 1195 AACCATTTCTCACAGGATGTGTTAAACGAGTATGCCGACGCGCTCGGGAC 1244
BSNT_06097___ 1245 TGAGCTTCCGCAAACAACGGCATTGCTGACAATCAACGAGACGATTCCTG 1294
||||||.|||||.||||||||..||.||||.|||||.||.||||||||||
RBAM_036750__ 1245 TGAGCTGCCGCAGACAACGGCGCTGTTGACCATCAATGACACGATTCCTG 1294
BSNT_06097___ 1295 AAGACAGTGTCATCATCTGTTCAGCAGGCTCACTCCCAGGAGATTTGCAG 1344
||||.||.|||.|||||.||||.||.||.||.||.||.||||||||||||
RBAM_036750__ 1295 AAGATAGCGTCGTCATCAGTTCGGCGGGATCTCTTCCGGGAGATTTGCAG 1344
BSNT_06097___ 1345 CGTCTGTGGCATTCTAATGTTCCGAATACGTATCACCTGGAGTATGGGTA 1394
||.|||||||||||.||.||.|||||||||||.|||||.|||||.||.||
RBAM_036750__ 1345 CGGCTGTGGCATTCCAACGTCCCGAATACGTACCACCTCGAGTACGGCTA 1394
BSNT_06097___ 1395 TTCTTGCATGGGCTATGAAGTGTCCGGGACACTCGGTCTTAAACTGGCCC 1444
|||.||||||||.||||||||.||.||.||.|||||.||.||.|||||||
RBAM_036750__ 1395 TTCCTGCATGGGATATGAAGTATCAGGCACGCTCGGCCTCAAGCTGGCCC 1444
BSNT_06097___ 1445 ACCCTGACAGAGAAGTGTATTCAATCGTCGGAGACGGCAGCTTCCTGATG 1494
|.||.||||.||||||.||||||.|||||||.|||||.|||||.||||||
RBAM_036750__ 1445 ATCCCGACAAAGAAGTCTATTCACTCGTCGGCGACGGAAGCTTTCTGATG 1494
BSNT_06097___ 1495 CTTCATTCTGAATTGATCACGGCGATTCAGTACAACAAGAAAATCAATGT 1544
||.||.||.||..||||.||.|||.||||.||.|||||.|||||||||||
RBAM_036750__ 1495 CTGCACTCAGAGCTGATTACCGCGCTTCAATATAACAAAAAAATCAATGT 1544
BSNT_06097___ 1545 GCTGCTCTTTGACAACTCAGGATTCGGATGCATCAACAACCTGCAAATGG 1594
.|||||.|||||||||||.||||||||.||.||.|||||||||||.||||
RBAM_036750__ 1545 CCTGCTTTTTGACAACTCGGGATTCGGCTGTATTAACAACCTGCAGATGG 1594
BSNT_06097___ 1595 ATCACGGCAGCGGCAGCTACTATTGCGAGTTCCGAACAGATGACAACCAA 1644
|||||||.||||||||.||.|..|||||||||||.|||||.|||||.||.
RBAM_036750__ 1595 ATCACGGGAGCGGCAGTTATTTCTGCGAGTTCCGCACAGAGGACAATCAG 1644
BSNT_06097___ 1645 ATCCTGAATGTCGATTACGCGAAAGTCGCTGAGGGATACGGCGCGAAAAC 1694
||..|.||.||.|||||||||||.||.||.|||||.||||||||.|||||
RBAM_036750__ 1645 ATTTTAAACGTTGATTACGCGAAGGTGGCAGAGGGCTACGGCGCTAAAAC 1694
BSNT_06097___ 1695 CTACCGCGCAAACACAGTAGAAGAATTAAAAGCGGCGTTAGAGGATGCGA 1744
.|||.|.||.||.||.||.||||||.|.|||||||||.|.||.|||||||
RBAM_036750__ 1695 ATACAGAGCCAATACGGTTGAAGAACTGAAAGCGGCGCTTGAAGATGCGA 1744
BSNT_06097___ 1745 AGAAACAGAATGTATCAACATTAATTGAAATGAAGGTGCTGCCTAAAACA 1794
|.|..||..|.|||||.||.|||||||||||||||||.|||||.|||||.
RBAM_036750__ 1745 AAACGCAAGACGTATCCACTTTAATTGAAATGAAGGTTCTGCCGAAAACG 1794
BSNT_06097___ 1795 ATGACGGACGGCTATGACAGCTGGTGGCATGTCGGAGTGGCAGAGGTATC 1844
|||||||||||||||||||||||||||||||||||.|||||.||.||.||
RBAM_036750__ 1795 ATGACGGACGGCTATGACAGCTGGTGGCATGTCGGCGTGGCGGAAGTGTC 1844
BSNT_06097___ 1845 TGAACAAGAAAGCGTTCAGAAAGCATACGAAGCAAAAGAGAAAAAGCTGG 1894
.||.||..|||||||||||...|||||.|||||.|||||||..||||||.
RBAM_036750__ 1845 GGAGCAGAAAAGCGTTCAGCGGGCATATGAAGCGAAAGAGACGAAGCTGA 1894
BSNT_06097___ 1895 AATCTGCGAAGCAGTATTAG 1914
|.|||||.||||||||.|||
RBAM_036750__ 1895 AGTCTGCAAAGCAGTACTAG 1914
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