Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06094 and RBAM_036730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence dna-align/BSNT_06094___iolF.1.9828.seq
# -bsequence dna-align/RBAM_036730___iolF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06094___iolF-RBAM_036730___iolF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06094___iolF-RBAM_036730___iolF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06094___iolF
# 2: RBAM_036730___iolF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1334
# Identity: 988/1334 (74.1%)
# Similarity: 988/1334 (74.1%)
# Gaps: 55/1334 ( 4.1%)
# Score: 3606.0
#
#
#=======================================
BSNT_06094___ 1 ATGGGCAATA---CCAATGGAGATTCAGCCTTCAATAAACGGACAATCGC 47
||| |||| ||||.|..||.|||||.||||..|||.||||.|||||
RBAM_036730__ 1 ATG---AATAGTGCCAAGGCGGAATCAGCTTTCAGCAAAAGGACCATCGC 47
BSNT_06094___ 48 GGCAGCATTGGCCAACTATATTGATGCCGGTTCAATTGTGGCAGGCTCCG 97
.||||||||.||.||.||.||||||||.|||||.||.||||||||.||.|
RBAM_036730__ 48 CGCAGCATTAGCAAATTACATTGATGCGGGTTCCATCGTGGCAGGATCAG 97
BSNT_06094___ 98 CCGGTTTATCATTATGGGTCAGTTACCTTAAGCTATCCGATACGCAAATC 147
|.||||||||..|.||||||||.|||.|.|||||.|||||.|..||.|||
RBAM_036730__ 98 CGGGTTTATCTATGTGGGTCAGCTACTTGAAGCTGTCCGACAGCCAGATC 147
BSNT_06094___ 148 GGGCTGCTTGGCGCGCTGAGCGCAAATGCGATTTCTGCCGCTGTCGGCGC 197
||..||||.|||||..|.||||||||.|||||.||.||.||.|||||.||
RBAM_036730__ 148 GGATTGCTCGGCGCCTTCAGCGCAAACGCGATATCAGCGGCCGTCGGAGC 197
BSNT_06094___ 198 GCTGCTTGGCGGGTTTCTGGCTGATAAAGTCGGACGGAAGGCTGTTTATA 247
||||||.|||||||.|.||||||||||.|||||.||.||.|||||.||.|
RBAM_036730__ 198 GCTGCTCGGCGGGTATTTGGCTGATAAGGTCGGCCGAAAAGCTGTATACA 247
BSNT_06094___ 248 CCAATAGTATGCTGGTTTATGCACTAGGGATTTGTTTGGTTTTGTTCGGG 297
|.||.||||||||.||.||.|...||||.|||||||||||||||||.||.
RBAM_036730__ 248 CAAACAGTATGCTCGTCTACGTCTTAGGAATTTGTTTGGTTTTGTTTGGA 297
BSNT_06094___ 298 GTTAATTTCCCCATGTTGTTAAGCGGTTACATCATTATCGGTTTATCAGT 347
.||||.||.||||||.|||||.||||.|||||.||||||||..|.||.||
RBAM_036730__ 298 TTTAACTTTCCCATGCTGTTATGCGGATACATGATTATCGGGATTTCTGT 347
BSNT_06094___ 348 AGGAGCTGATATAACCGCGTCATGGACCATTATTGCGGAAAATGCGCCAA 397
|||.||.|||||.||.||.||||||||||||||.||||||||.||.||..
RBAM_036730__ 348 AGGCGCGGATATTACGGCTTCATGGACCATTATCGCGGAAAACGCCCCCG 397
BSNT_06094___ 398 AGAAGAATCGGGCCAGGCATTGTGGCGTAGCACAAGTCGCTTGGGCCGCG 447
||||.||.|||||.||||||||.||.||.||.||.||.||.||||||||.
RBAM_036730__ 398 AGAAAAACCGGGCGAGGCATTGCGGAGTGGCGCAGGTGGCGTGGGCCGCA 447
BSNT_06094___ 448 GGCGCTGTCGTTGTACTGTTCCTCTCCGTACTGGCCGGTGACTTGGGACT 497
||.||.||.||.||.|||.|..|.|||||..|||.|||||||.|.||.||
RBAM_036730__ 448 GGAGCCGTTGTGGTTCTGCTGTTATCCGTTTTGGTCGGTGACCTCGGGCT 497
BSNT_06094___ 498 CTTGGGGAATAAAATCGTATTTGCCCATCTGCTTGTGATTGCGCTGATTA 547
.||.||.||||||||.||.|||||.|||||..|.|||||.||.|||||.|
RBAM_036730__ 498 TTTAGGAAATAAAATTGTCTTTGCGCATCTATTGGTGATCGCCCTGATCA 547
BSNT_06094___ 548 CGTACATCCTGAGAATCAGGCTT--CCGGAATCAGACGCCTGGCAGTCAA 595
|.||..|..|.|||| ||..|| ||.||.||.||.|||||| |
RBAM_036730__ 548 CATATGTGATAAGAA--AGCGTTTACCTGAGTCGGATGCCTGG------A 589
BSNT_06094___ 596 AAAATCAGCCGGAGGATGCTCAG-GCAGAGAAGCCGGCTGTACTGAGTAA 644
|||| ||| |.||||..|||.||.|...|||..||
RBAM_036730__ 590 AAAA----------------CAGTGAAGAGCGGCCTGCCGCCGTGAAAAA 623
BSNT_06094___ 645 GACATCATATTTTGATTTGCTCAAGCCTATGTATCTCAAAAGCATACTGT 694
.|||||.||||||||..||||..||||.|..|.|.||||.|.|||..|||
RBAM_036730__ 624 AACATCTTATTTTGACCTGCTTCAGCCGAAATTTTTCAAGAACATTTTGT 673
BSNT_06094___ 695 TTTTGATGGGTGTGTACTTGGTTTGGAACTTAGCCGCCGGGGTCATGGGC 744
||||.||||||||||...|.||.|||||..|.|||||.||.||||||||.
RBAM_036730__ 674 TTTTAATGGGTGTGTTTCTCGTATGGAATCTCGCCGCGGGCGTCATGGGA 723
BSNT_06094___ 745 TTCTTTATGCCATACATTTATCAGCAGGTCGGCGGTGTATCTGCCAACAT 794
|||||.|||||.|||||.||.||||||||||||||.|||||.||.||.|.
RBAM_036730__ 724 TTCTTCATGCCGTACATCTACCAGCAGGTCGGCGGCGTATCCGCAAATAC 773
BSNT_06094___ 795 GGCCAACCTTTTGCAAATGGGGCTGTTTATCTTCACAGGATTGGGGGTCG 844
|||||||.||.||||.||||..||||||||||||||.||..|.||.||||
RBAM_036730__ 774 GGCCAACATTCTGCAGATGGCCCTGTTTATCTTCACCGGGCTCGGCGTCG 823
BSNT_06094___ 845 CTTTGATCTTCATGCCCTTTGCCGACAAATATAGAAAAACCGTATTTGGA 894
|.|..|||||||||||.|||||.||.||||||.|.|||||.||.||.|||
RBAM_036730__ 824 CCTGTATCTTCATGCCTTTTGCAGATAAATATCGGAAAACGGTGTTCGGA 873
BSNT_06094___ 895 ATCGCCGCTTTCATGGCGGTGATCGGGTGGACACTGTTTCTGCTGCCAGT 944
|||..|||....|||||.||..||||.|||.|.||||||.|.|||||..|
RBAM_036730__ 874 ATCTGCGCAAGTATGGCCGTTGTCGGCTGGTCGCTGTTTTTACTGCCGTT 923
BSNT_06094___ 945 TGAAGGCCTGCCGATTCTGCTCCTGTTTATTGTCGTGATCGGCATCAATA 994
|.|.||.||.|||||.|||||..|||||.||.|.|.||||||||||||||
RBAM_036730__ 924 TCAGGGGCTCCCGATGCTGCTTTTGTTTGTTTTAGCGATCGGCATCAATA 973
BSNT_06094___ 995 ACGGAGCCGGGCAGCAAGCGAACTATCAGTTATGGGCCAGCGAAATCTTT 1044
||||||||||.|||||.||||||||.|||.|.|||||.|||||..|.||.
RBAM_036730__ 974 ACGGAGCCGGCCAGCAGGCGAACTACCAGCTGTGGGCAAGCGAGCTGTTC 1023
BSNT_06094___ 1045 CCTACGCAATATCGTGCTTCCGCACAAGGACTGATGTTTTTCCTTGTCCG 1094
||.||..||.|..|.||.||.||||||||.||.|||||.||.||.|||||
RBAM_036730__ 1024 CCGACAGAACACAGAGCGTCAGCACAAGGGCTCATGTTCTTTCTCGTCCG 1073
BSNT_06094___ 1095 TATTTCAATAGGGATTTGGAGTCTGTTTGTCCCAATGAT--TATCACCAA 1142
|||||||||.||.|||||||||.|.|||||.||..|.|| |.|||| |
RBAM_036730__ 1074 TATTTCAATCGGAATTTGGAGTTTATTTGTGCCGGTCATCATGTCAC--A 1121
BSNT_06094___ 1143 TTTCGGCATTGGAACGATGGCTGCAATTCTTCTCGGATGTGTGACGGCCA 1192
.||||||||.||....|||||.|..|||||.|||..||||||||||||||
RBAM_036730__ 1122 ATTCGGCATCGGTTTTATGGCCGGTATTCTGCTCATATGTGTGACGGCCA 1171
BSNT_06094___ 1193 GTATGATCATCGGGCTGCTCTTTGCGCCGAATACGTCTGGCAAGTCGCTT 1242
||||||||||||||||..|.||.||.|||||||||||.||||||||||||
RBAM_036730__ 1172 GTATGATCATCGGGCTTGTTTTCGCACCGAATACGTCCGGCAAGTCGCTT 1221
BSNT_06094___ 1243 GAGCAAATTCAAGAGGAACTCTACGGATCTCCTCAG---AGCCAAGTAAA 1289
||.||.||.||.||||||||.|||||..|||||||| .|| |
RBAM_036730__ 1222 GAACAGATACAGGAGGAACTGTACGGCGCTCCTCAGGACGGC-------A 1264
BSNT_06094___ 1290 GCAAGAAACAGAAAGCA----AA--ATAATGTAA 1317
||.||||| |||||| | || ||.||.|.|
RBAM_036730__ 1265 GCGAGAAA-AGAAAG-ACGAGAACCATTATTTGA 1296
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