Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06090 and RBAM_036710

See Amino acid alignment / Visit BSNT_06090 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06090___iolH.1.9828.seq
#    -bsequence dna-align/RBAM_036710___iolH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06090___iolH-RBAM_036710___iolH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06090___iolH-RBAM_036710___iolH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06090___iolH
# 2: RBAM_036710___iolH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 870
# Identity:     788/870 (90.6%)
# Similarity:   788/870 (90.6%)
# Gaps:           0/870 ( 0.0%)
# Score: 3612.0
# 
#
#=======================================

BSNT_06090___      1 ATGAAGTTAGCATTGGATCCATCCATGTATCGTGATGATTTAACTTTAGA     50
                     |||||..|.||.||.||||||||||||||.||.|||||||||||.|||||
RBAM_036710__      1 ATGAAACTGGCCTTAGATCCATCCATGTACCGCGATGATTTAACGTTAGA     50

BSNT_06090___     51 GGAAACGGTCTATAAAACGGCGGAGCTTGGCTATGAATATATCGAATTGT    100
                     .||||.||||||||||||||||||.||.||.||.||||||||||||.|||
RBAM_036710__     51 AGAAATGGTCTATAAAACGGCGGAACTCGGATACGAATATATCGAACTGT    100

BSNT_06090___    101 CTCCGCGTGAGGATTTTTGCCCGTTTTATAAATATCCGAAAGTCGATTCA    150
                     |||||||.|||||||||||.||.||.||||||||||||||||||||||||
RBAM_036710__    101 CTCCGCGCGAGGATTTTTGTCCTTTCTATAAATATCCGAAAGTCGATTCA    150

BSNT_06090___    151 GCAAAGATCAAACAATTAAAGCGCCTTTTAAGAGATACAGGTGTTAAGCT    200
                     |||||.|||||||||||.|||||||||||||.||||||||||||.|||||
RBAM_036710__    151 GCAAAAATCAAACAATTGAAGCGCCTTTTAAAAGATACAGGTGTGAAGCT    200

BSNT_06090___    201 TTCATCGCTTCTTCCTCTTTACCACTGGGCGGGACCCGATGAAGACCGCC    250
                     .||.||.||||||||.|||||||||||||||||.||.|||||||||||.|
RBAM_036710__    201 GTCTTCTCTTCTTCCGCTTTACCACTGGGCGGGTCCTGATGAAGACCGTC    250

BSNT_06090___    251 GCCAGGCAGCAGTGCGCAATTGGAAACGGGCAATCGAAATTGCCGTTGAA    300
                     |.|||||.||.||||||||.|||||||||||.|||||||||||.||||||
RBAM_036710__    251 GTCAGGCCGCCGTGCGCAACTGGAAACGGGCGATCGAAATTGCGGTTGAA    300

BSNT_06090___    301 CTTGAAGTGGATTTGATGAACAGCGAATTCAGCGGTTCAAAATATGATCC    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_036710__    301 CTTGAAGTGGATTTGATGAACAGTGAATTCAGCGGTTCAAAATATGATCC    350

BSNT_06090___    351 TTTAACAAGTGAAGAAAAATTTATCAAATCCATGGATGAGCTTCTGCCAG    400
                     .||.|||||||||||||||||.|||||||||||||||||.||.|||||.|
RBAM_036710__    351 GTTGACAAGTGAAGAAAAATTCATCAAATCCATGGATGAACTGCTGCCCG    400

BSNT_06090___    401 TCTTTGAAAAAGAAGGTATTAAACTCAATCTTCAAGCCCACCCATACGAT    450
                     ||||||||||||||||..|||||||||||||.||.||.||.|||||||||
RBAM_036710__    401 TCTTTGAAAAAGAAGGCGTTAAACTCAATCTGCAGGCTCATCCATACGAT    450

BSNT_06090___    451 TTTATCGAAACGCACAAAGGTGCGATGGATATGATCCGCGCGCTTGACAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036710__    451 TTTATCGAAACGCACAAAGGTGCGATGGATATGATCCGCGCGCTTGACAA    500

BSNT_06090___    501 GGATTGGATCAATCTTGTCTACTCGACTGCGCATACGTTCTTCTATGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036710__    501 GGATTGGATCAATCTTGTCTACTCGACTGCGCATACGTTCTTCTATGATG    550

BSNT_06090___    551 ACGGCAAAGGCGACATCGAGACCATGTTTGACGAAGCCGGCGACCGCCTC    600
                     ||||.||||||||.||.|.||||||||||||.||||||||||||||||||
RBAM_036710__    551 ACGGAAAAGGCGATATTGCGACCATGTTTGATGAAGCCGGCGACCGCCTC    600

BSNT_06090___    601 ACACATGTTTTATTTGCAGATACCTATAATCATAAAGCGGCTCATGGTCT    650
                     |||||||||||||||||||||||.|.|||||||||||||||.|||||.||
RBAM_036710__    601 ACACATGTTTTATTTGCAGATACTTTTAATCATAAAGCGGCGCATGGCCT    650

BSNT_06090___    651 TCGCTATATCGTCAATCCGCCTGACGCGCAAGTAACGGTTCACCAGCATT    700
                     .|||||.||||||||.||||||||||||.|||||||||||||||||||||
RBAM_036710__    651 GCGCTACATCGTCAACCCGCCTGACGCGAAAGTAACGGTTCACCAGCATT    700

BSNT_06090___    701 TGGACATTGGTCAAGGCGAGGTTGATTTTGATACGATTTTCAGAAAACTG    750
                     |||||||.||.||||||||||||||||||||.||||||||||||||..||
RBAM_036710__    701 TGGACATCGGGCAAGGCGAGGTTGATTTTGAGACGATTTTCAGAAAGATG    750

BSNT_06090___    751 AGAGAGATGAAGTTCGACGGAATTGCGACGAATGCCGTATTTGCTTGGGT    800
                     |||||||||||.||||||||||||||||||||.|||||.|||||||||||
RBAM_036710__    751 AGAGAGATGAAATTCGACGGAATTGCGACGAACGCCGTTTTTGCTTGGGT    800

BSNT_06090___    801 CGATGAAAGAGCGGATGAATCAAGCCGATTTATGCTTAAGAAAATGAAAG    850
                     ||..|||||||||||||||||||||||....|.||||||||||.|.||.|
RBAM_036710__    801 CGGCGAAAGAGCGGATGAATCAAGCCGGACCACGCTTAAGAAATTAAAGG    850

BSNT_06090___    851 AAGAATTAGGTCTGGCATAA    870
                     ||||||||||..||||||||
RBAM_036710__    851 AAGAATTAGGCATGGCATAA    870


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