Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06087 and RBAM_036630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence dna-align/BSNT_06087___yxdJ.1.9828.seq
# -bsequence dna-align/RBAM_036630___yxdJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06087___yxdJ
# 2: RBAM_036630___yxdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 640/690 (92.8%)
# Similarity: 640/690 (92.8%)
# Gaps: 0/690 ( 0.0%)
# Score: 3000.0
#
#
#=======================================
BSNT_06087___ 1 TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATT 50
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__ 1 ATGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATT 50
BSNT_06087___ 51 GCAGAATTACCTTGAAAAATACGGATACCAAACAGTGGTCGCCGCGGATT 100
|||||||||||||||||||||||||||.|||||.||||.|||||..||||
RBAM_036630__ 51 GCAGAATTACCTTGAAAAATACGGATATCAAACCGTGGCCGCCGATGATT 100
BSNT_06087___ 101 TTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTG 150
|.||.||||||||||||||.|||||||||||||||||.||||||||||||
RBAM_036630__ 101 TCACGGCTGTTCTTGATGTTTTTTTGCGGGAAAAGCCTGATGTGGTGCTG 150
BSNT_06087___ 151 CTTGATATCAATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGAT 200
||||||||||||.|||||.|.||||||||.||||||||||||||.|||||
RBAM_036630__ 151 CTTGATATCAATCTGCCGTCTTATGACGGCTATTATTGGTGCCGCCAGAT 200
BSNT_06087___ 201 CCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCCAGAAGCGGGG 250
|||||||||.||.||||||||||||||.||.||.||.|||||||||||||
RBAM_036630__ 201 CCGCCAGCATTCTACAAGCCCGATCATTTTCATCTCAGCCAGAAGCGGGG 250
BSNT_06087___ 251 AAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAA 300
||||||||||.||.||||||||||||||.||.|||||.||||||||||||
RBAM_036630__ 251 AAATGGATCAAGTAATGGCGATTGAAAACGGCGGAGATGATTATATCGAA 300
BSNT_06087___ 301 AAACCGTTTTCTTATGATATTGTGCTTGCGAAAATCAAAAGCCAGATCCG 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_036630__ 301 AAACCGTTTTCTTATGATATTGTGCTGGCGAAAATCAAAAGCCAGATCCG 350
BSNT_06087___ 351 GAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT 400
.|||||.|||||.|||||||||||.|||||||||||||||||||||||||
RBAM_036630__ 351 CAGGGCATACGGAGAGTACGCCGCCAAGCAGGGAGAGAAAGTGGTTGAAT 400
BSNT_06087___ 401 ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGAT 450
|||||||.||.|||||||||||||||||||||||||||||.||||||||.
RBAM_036630__ 401 ATGCCGGTGTGCAGCTCTTTGTGGAACGGTTTGAACTGCGCTTTCAGGAC 450
BSNT_06087___ 451 GAAAAAAGCGAGCTTTCTAAAAAAGAAAGCAAGCTTTTGGAAGTGCTGCT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__ 451 GAAAAAAGCGAGCTTTCTAAAAAAGAAAGCAAGCTTTTGGAAGTGCTGCT 500
BSNT_06087___ 501 TGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGT 550
.|||||||||||||||||||||.|..|.|||||.|||||||||||.||||
RBAM_036630__ 501 GGAGCGGGGAGAAAAGGTGACGGGAAGAGACCGGCTCATGGAAAAAACGT 550
BSNT_06087___ 551 GGGACACCGACATATTCATCGATGATAATACACTTAACGTGTATATCACG 600
||||||||||.||.|||.|||||||||||||.||||||||||||||||||
RBAM_036630__ 551 GGGACACCGATATTTTCGTCGATGATAATACGCTTAACGTGTATATCACG 600
BSNT_06087___ 601 CGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTTCTATTGAAGC 650
|||||||||||||||||||||||||||||||||||||||||.||||||.|
RBAM_036630__ 601 CGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTTCCATTGAATC 650
BSNT_06087___ 651 GGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA 690
|||||||||||||||||||||||||||||.||.|||||||
RBAM_036630__ 651 GGTGCGGGGCGAAGGCTACCAGCTGAGGGGGCTGTCATGA 690
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