Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06077 and RBAM_036600
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Amino acid alignment /
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence dna-align/BSNT_06077.1.9828.seq
# -bsequence dna-align/RBAM_036600___yxdM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06077-RBAM_036600___yxdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06077-RBAM_036600___yxdM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06077
# 2: RBAM_036600___yxdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1869
# Identity: 1574/1869 (84.2%)
# Similarity: 1574/1869 (84.2%)
# Gaps: 186/1869 (10.0%)
# Score: 7434.0
#
#
#=======================================
BSNT_06077 0 -------------------------------------------------- 0
RBAM_036600__ 1 ATGACCTTTCTTCAGTTCGCTTATAAAAACGTCACGAGAAACAAAAGGGC 50
BSNT_06077 0 -------------------------------------------------- 0
RBAM_036600__ 51 CTATCTTGCTTTCTTTTTAAGCAGCGCTTTTTCCGTTTTGATTTTCTTTA 100
BSNT_06077 0 -------------------------------------------------- 0
RBAM_036600__ 101 CCTTTGCGATGTTCCTGTTTCATCCGGCACTAAAGGAAGGCTACCTGAAT 150
BSNT_06077 1 ------------------------------------ATGATCTTTGTTTT 14
||||||||||||||
RBAM_036600__ 151 AACATCGCCAGAAAAGGCTTAACCGCCGCGGAATGGATGATCTTTGTTTT 200
BSNT_06077 15 TTCTTTCTTATTTGTTCTGTATTCGGTTAACGCATTTTTGAAATCGAGAA 64
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036600__ 201 TTCTTTCTTATTTGTTCTGTATTCGGTTAACGCATTTTTGAAATCGAGAA 250
BSNT_06077 65 ATAAAGAATTCGGCATCCTGCTCATGCAGGGCATCACGCCGGGGCAGCTG 114
||||||||||||||||||||||.||||||||.||.|||||||.|||||||
RBAM_036600__ 251 ATAAAGAATTCGGCATCCTGCTGATGCAGGGTATTACGCCGGTGCAGCTG 300
BSNT_06077 115 AGAAAGCTCATTACTGCGGAAAATATGATCATCGGCGTTATGTCAATTGC 164
||||||||||||||.||||||||.||||||||||||||.|||||.||.||
RBAM_036600__ 301 AGAAAGCTCATTACGGCGGAAAACATGATCATCGGCGTCATGTCGATCGC 350
BSNT_06077 165 AGCCGGCATTATCGGAGGGTTCATTTTTTCAAAGACGTTCTTTACGGTCG 214
|||.||.|||||||||||.|||||||||||.||.||||||||||||||||
RBAM_036600__ 351 AGCGGGGATTATCGGAGGCTTCATTTTTTCGAAAACGTTCTTTACGGTCG 400
BSNT_06077 215 GCGCTTATATTTTAGAAATGGACGCGCTGCCCCTGTACATGCCTTGGAAA 264
|||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_036600__ 401 GCGCTTATATTTTAGAAATGGACGCGCTGCCTCTGTACATGCCTTGGAAA 450
BSNT_06077 265 GCGCTCGGCATTACGGCCGGCGGATTTCTGCTCTTATTTTTCTTTTTATC 314
||||||||||||||||||||||||||||||||||||||||||.|||||||
RBAM_036600__ 451 GCGCTCGGCATTACGGCCGGCGGATTTCTGCTCTTATTTTTCCTTTTATC 500
BSNT_06077 315 GCAGTTTACGATTCTTTTTGTCAGATCAAATACGGTTATCAAATTAATAA 364
||||||.|||||.|||||||||||||||||||||||.|||||||||||||
RBAM_036600__ 501 GCAGTTCACGATCCTTTTTGTCAGATCAAATACGGTGATCAAATTAATAA 550
BSNT_06077 365 AGGGCACTGATAAGATTAAGCCGGAGCCTAAGCCGTCCGTGCTTCTGTCC 414
||||||||||.|||||.|||||||||||.||||||||||||||||||||.
RBAM_036600__ 551 AGGGCACTGACAAGATCAAGCCGGAGCCGAAGCCGTCCGTGCTTCTGTCT 600
BSNT_06077 415 TTATTCGGCATCGCCTGTCTGTGCGGCGGGTACGGCATGGTTCTTAAAGG 464
.||||||||||||||||.|||||||||||||||||||||||.||||||||
RBAM_036600__ 601 ATATTCGGCATCGCCTGCCTGTGCGGCGGGTACGGCATGGTCCTTAAAGG 650
BSNT_06077 465 CAATGTCCACGGGGCCGAACCGTTTATCATTTTACTGCTCACCGTCATCG 514
|||||||||||||.|..|||||||.||||||||||||||.||||||||||
RBAM_036600__ 651 CAATGTCCACGGGACTCAACCGTTCATCATTTTACTGCTTACCGTCATCG 700
BSNT_06077 515 GAACATATTTCTTTTTCAGCCAAAGCAGCATATGGATTCTGCGCGCGCTG 564
|.||.||||||||||||||||||||||||||.||||||||||||||||||
RBAM_036600__ 701 GCACGTATTTCTTTTTCAGCCAAAGCAGCATCTGGATTCTGCGCGCGCTG 750
BSNT_06077 565 AAGAAGTGGAAAACCTTTTATCTTCGCGGGAAAAATATCATTTGGGTTTC 614
|||||||||||||||||||||||.||||||||||||.|||||||||||||
RBAM_036600__ 751 AAGAAGTGGAAAACCTTTTATCTGCGCGGGAAAAATGTCATTTGGGTTTC 800
BSNT_06077 615 TGACCTTGTCTATCGTCTAAAAGACAACGCCCGCCTGTTCTTTATTGTCA 664
|||||||||||||||..||||||||||||||||||||||||||||.||||
RBAM_036600__ 801 TGACCTTGTCTATCGATTAAAAGACAACGCCCGCCTGTTCTTTATCGTCA 850
BSNT_06077 665 GCATTATTTCCGCGGTTGCGTTTACTGCGACAGGCGTGCTCGCAATGTAC 714
||||||||||||||||.||||||||.|||||.|||||||||||.||||||
RBAM_036600__ 851 GCATTATTTCCGCGGTAGCGTTTACGGCGACGGGCGTGCTCGCGATGTAC 900
BSNT_06077 715 AAATCGACCGTTGGGGCGGAAGAGTCCGCTTATGAAATGGAGTATATATC 764
||||||||.||.|||||||||||||||||||||||.|||||||||.||||
RBAM_036600__ 901 AAATCGACTGTCGGGGCGGAAGAGTCCGCTTATGAGATGGAGTATTTATC 950
BSNT_06077 765 TTTTAGCAACAATCCAAAAGAACAGACTCATTTGAAAGATATTGACCATG 814
||..|||..|||.||||||||||||||||||||||||.|.||||||||||
RBAM_036600__ 951 TTACAGCGGCAACCCAAAAGAACAGACTCATTTGAAAAAAATTGACCATG 1000
BSNT_06077 815 AACTGAAAACACACGGCTTTACGTATAAGAAAGACAAAATAGATGTTTCC 864
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_036600__ 1001 AACTGAAAACACACGGCTTTACGTATAAGAAAGACAAAATAAATGTTTCC 1050
BSNT_06077 865 TATGTTCGCTATCAGGAAGGAGAAACTGTTCCCCCTGTTTACATGATCAG 914
|||||.|||||||||||||||||.||||||||.|||||||||||||||||
RBAM_036600__ 1051 TATGTCCGCTATCAGGAAGGAGATACTGTTCCGCCTGTTTACATGATCAG 1100
BSNT_06077 915 CAAATCGGATGTATCAAAATACTTCCATGTTAAGCTGAGCGGCCTGAAAA 964
|.||||||||||.||||.||||||||||||.||||||||||||||||||.
RBAM_036600__ 1101 CGAATCGGATGTGTCAACATACTTCCATGTCAAGCTGAGCGGCCTGAAAC 1150
BSNT_06077 965 ATGATGAGGCTGTCTATTTCCCGGGAACGTATGACCGCAATTTCAAAAAC 1014
|||||||||||||||||||||||||.|||||||||||.||||||||||||
RBAM_036600__ 1151 ATGATGAGGCTGTCTATTTCCCGGGCACGTATGACCGGAATTTCAAAAAC 1200
BSNT_06077 1015 GAAGCGCCGGATCAGCTGAAGCTGCTGAACCAAAAAGGGGAGCTGTCTGA 1064
.||||.||||||||||||||||||||||||||||||||..|||.||||||
RBAM_036600__ 1201 AAAGCACCGGATCAGCTGAAGCTGCTGAACCAAAAAGGCAAGCCGTCTGA 1250
BSNT_06077 1065 TCAAAAACTGTCGGTAAAAGAAGTCAAAAAACCGCTGATCTCATTGAATG 1114
.|||||||||.|||||||||||.||.|||||||||||||.|||||.||||
RBAM_036600__ 1251 ACAAAAACTGACGGTAAAAGAACTCGAAAAACCGCTGATTTCATTAAATG 1300
BSNT_06077 1115 CCATCATCGCGGTGAATGATCAAACCTTTGATCAGCTGAAATCACTCGGT 1164
||||||||||||||||.||||||||||||||||||||.||||||||||||
RBAM_036600__ 1301 CCATCATCGCGGTGAACGATCAAACCTTTGATCAGCTCAAATCACTCGGT 1350
BSNT_06077 1165 GATAAAGCGTCATTATACGGCTACAGCTATGATCATTGGAAAGACAGTCT 1214
||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036600__ 1351 GAAAAAGCGTCATTATACGGCTACAGCTATGATCATTGGAAAGACAGTCT 1400
BSNT_06077 1215 TGAGATCAGCCAATCCTTGCAAAATGAGATTTACGGCAATTATATCGACG 1264
||.|.||||||||||..||.||.|||||||.||||||||.||||||||||
RBAM_036600__ 1401 TGGGTTCAGCCAATCTCTGAAAGATGAGATCTACGGCAACTATATCGACG 1450
BSNT_06077 1265 TGCATTCTGATTTTGCTTCAAAAGCCGGGACTTACTATGATACGGTGCAG 1314
||||||||||||||...||||||||||||||.||||||||||||||||||
RBAM_036600__ 1451 TGCATTCTGATTTTATGTCAAAAGCCGGGACGTACTATGATACGGTGCAG 1500
BSNT_06077 1315 CTGCCGAGCTTGAGTTTATTTATCGGCCTGTTTATCGCAATTGTATTCTT 1364
|||||||||.||||||||||.|||||||||||||||||||||||||||||
RBAM_036600__ 1501 CTGCCGAGCCTGAGTTTATTCATCGGCCTGTTTATCGCAATTGTATTCTT 1550
BSNT_06077 1365 TGTCGCGGCAGCAAGTTTCTTATATTTCAGGCTGTTCACTGATTTAGATG 1414
|||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_036600__ 1551 TGTCGCGGCAGCAAGTTTCTTATATTTCAGGCTGTTCACAGATTTAGATG 1600
BSNT_06077 1415 AAGACCGGGAGCGCTACCGTTCACTGGCCAAAATCGGCCTGAGTGAGCGT 1464
|||||||||||||||||||||||.|||||||||||||.||||||||||||
RBAM_036600__ 1601 AAGACCGGGAGCGCTACCGTTCATTGGCCAAAATCGGTCTGAGTGAGCGT 1650
BSNT_06077 1465 GAAATGGCACAAAGCGTGACAATACAATTGGCCATTCTTTTCTTCTTTCC 1514
||||||||||||||||||||.|||||||||||.|||||.||.||||||||
RBAM_036600__ 1651 GAAATGGCACAAAGCGTGACGATACAATTGGCGATTCTCTTTTTCTTTCC 1700
BSNT_06077 1515 ATTTGTCATTGCCGTCATGCATACACTGTTTGCCTTGAGAACATTGGCTG 1564
.||.||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_036600__ 1701 TTTCGTCATTGCCGTCATGCATACACTGTTTGCCTTGAGAACATTGGCCG 1750
BSNT_06077 1565 TGGAAGGCTATTCCGATGTCGCGGGGCCGCTCAGTCTCACCATCGGAGGG 1614
|||||||||||||||||||.|||||||||||||||.||||.|||||||||
RBAM_036600__ 1751 TGGAAGGCTATTCCGATGTAGCGGGGCCGCTCAGTTTCACTATCGGAGGG 1800
BSNT_06077 1615 TTTTTCATTTTTCAGCTTCTATTCTTCCTCGCGGTGCGGTCAAGCTATTT 1664
||||||||||||||||||||.|||||||||.|.|||||||||||||||||
RBAM_036600__ 1801 TTTTTCATTTTTCAGCTTCTGTTCTTCCTCACAGTGCGGTCAAGCTATTT 1850
BSNT_06077 1665 GAAAAAAATGAACAAGTAA 1683
|||||||||||||||||||
RBAM_036600__ 1851 GAAAAAAATGAACAAGTAA 1869
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