Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06077 and RBAM_036600

See Amino acid alignment / Visit BSNT_06077 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06077.1.9828.seq
#    -bsequence dna-align/RBAM_036600___yxdM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06077-RBAM_036600___yxdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06077-RBAM_036600___yxdM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06077
# 2: RBAM_036600___yxdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1869
# Identity:    1574/1869 (84.2%)
# Similarity:  1574/1869 (84.2%)
# Gaps:         186/1869 (10.0%)
# Score: 7434.0
# 
#
#=======================================

BSNT_06077         0 --------------------------------------------------      0
                                                                       
RBAM_036600__      1 ATGACCTTTCTTCAGTTCGCTTATAAAAACGTCACGAGAAACAAAAGGGC     50

BSNT_06077         0 --------------------------------------------------      0
                                                                       
RBAM_036600__     51 CTATCTTGCTTTCTTTTTAAGCAGCGCTTTTTCCGTTTTGATTTTCTTTA    100

BSNT_06077         0 --------------------------------------------------      0
                                                                       
RBAM_036600__    101 CCTTTGCGATGTTCCTGTTTCATCCGGCACTAAAGGAAGGCTACCTGAAT    150

BSNT_06077         1 ------------------------------------ATGATCTTTGTTTT     14
                                                         ||||||||||||||
RBAM_036600__    151 AACATCGCCAGAAAAGGCTTAACCGCCGCGGAATGGATGATCTTTGTTTT    200

BSNT_06077        15 TTCTTTCTTATTTGTTCTGTATTCGGTTAACGCATTTTTGAAATCGAGAA     64
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036600__    201 TTCTTTCTTATTTGTTCTGTATTCGGTTAACGCATTTTTGAAATCGAGAA    250

BSNT_06077        65 ATAAAGAATTCGGCATCCTGCTCATGCAGGGCATCACGCCGGGGCAGCTG    114
                     ||||||||||||||||||||||.||||||||.||.|||||||.|||||||
RBAM_036600__    251 ATAAAGAATTCGGCATCCTGCTGATGCAGGGTATTACGCCGGTGCAGCTG    300

BSNT_06077       115 AGAAAGCTCATTACTGCGGAAAATATGATCATCGGCGTTATGTCAATTGC    164
                     ||||||||||||||.||||||||.||||||||||||||.|||||.||.||
RBAM_036600__    301 AGAAAGCTCATTACGGCGGAAAACATGATCATCGGCGTCATGTCGATCGC    350

BSNT_06077       165 AGCCGGCATTATCGGAGGGTTCATTTTTTCAAAGACGTTCTTTACGGTCG    214
                     |||.||.|||||||||||.|||||||||||.||.||||||||||||||||
RBAM_036600__    351 AGCGGGGATTATCGGAGGCTTCATTTTTTCGAAAACGTTCTTTACGGTCG    400

BSNT_06077       215 GCGCTTATATTTTAGAAATGGACGCGCTGCCCCTGTACATGCCTTGGAAA    264
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_036600__    401 GCGCTTATATTTTAGAAATGGACGCGCTGCCTCTGTACATGCCTTGGAAA    450

BSNT_06077       265 GCGCTCGGCATTACGGCCGGCGGATTTCTGCTCTTATTTTTCTTTTTATC    314
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
RBAM_036600__    451 GCGCTCGGCATTACGGCCGGCGGATTTCTGCTCTTATTTTTCCTTTTATC    500

BSNT_06077       315 GCAGTTTACGATTCTTTTTGTCAGATCAAATACGGTTATCAAATTAATAA    364
                     ||||||.|||||.|||||||||||||||||||||||.|||||||||||||
RBAM_036600__    501 GCAGTTCACGATCCTTTTTGTCAGATCAAATACGGTGATCAAATTAATAA    550

BSNT_06077       365 AGGGCACTGATAAGATTAAGCCGGAGCCTAAGCCGTCCGTGCTTCTGTCC    414
                     ||||||||||.|||||.|||||||||||.||||||||||||||||||||.
RBAM_036600__    551 AGGGCACTGACAAGATCAAGCCGGAGCCGAAGCCGTCCGTGCTTCTGTCT    600

BSNT_06077       415 TTATTCGGCATCGCCTGTCTGTGCGGCGGGTACGGCATGGTTCTTAAAGG    464
                     .||||||||||||||||.|||||||||||||||||||||||.||||||||
RBAM_036600__    601 ATATTCGGCATCGCCTGCCTGTGCGGCGGGTACGGCATGGTCCTTAAAGG    650

BSNT_06077       465 CAATGTCCACGGGGCCGAACCGTTTATCATTTTACTGCTCACCGTCATCG    514
                     |||||||||||||.|..|||||||.||||||||||||||.||||||||||
RBAM_036600__    651 CAATGTCCACGGGACTCAACCGTTCATCATTTTACTGCTTACCGTCATCG    700

BSNT_06077       515 GAACATATTTCTTTTTCAGCCAAAGCAGCATATGGATTCTGCGCGCGCTG    564
                     |.||.||||||||||||||||||||||||||.||||||||||||||||||
RBAM_036600__    701 GCACGTATTTCTTTTTCAGCCAAAGCAGCATCTGGATTCTGCGCGCGCTG    750

BSNT_06077       565 AAGAAGTGGAAAACCTTTTATCTTCGCGGGAAAAATATCATTTGGGTTTC    614
                     |||||||||||||||||||||||.||||||||||||.|||||||||||||
RBAM_036600__    751 AAGAAGTGGAAAACCTTTTATCTGCGCGGGAAAAATGTCATTTGGGTTTC    800

BSNT_06077       615 TGACCTTGTCTATCGTCTAAAAGACAACGCCCGCCTGTTCTTTATTGTCA    664
                     |||||||||||||||..||||||||||||||||||||||||||||.||||
RBAM_036600__    801 TGACCTTGTCTATCGATTAAAAGACAACGCCCGCCTGTTCTTTATCGTCA    850

BSNT_06077       665 GCATTATTTCCGCGGTTGCGTTTACTGCGACAGGCGTGCTCGCAATGTAC    714
                     ||||||||||||||||.||||||||.|||||.|||||||||||.||||||
RBAM_036600__    851 GCATTATTTCCGCGGTAGCGTTTACGGCGACGGGCGTGCTCGCGATGTAC    900

BSNT_06077       715 AAATCGACCGTTGGGGCGGAAGAGTCCGCTTATGAAATGGAGTATATATC    764
                     ||||||||.||.|||||||||||||||||||||||.|||||||||.||||
RBAM_036600__    901 AAATCGACTGTCGGGGCGGAAGAGTCCGCTTATGAGATGGAGTATTTATC    950

BSNT_06077       765 TTTTAGCAACAATCCAAAAGAACAGACTCATTTGAAAGATATTGACCATG    814
                     ||..|||..|||.||||||||||||||||||||||||.|.||||||||||
RBAM_036600__    951 TTACAGCGGCAACCCAAAAGAACAGACTCATTTGAAAAAAATTGACCATG   1000

BSNT_06077       815 AACTGAAAACACACGGCTTTACGTATAAGAAAGACAAAATAGATGTTTCC    864
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_036600__   1001 AACTGAAAACACACGGCTTTACGTATAAGAAAGACAAAATAAATGTTTCC   1050

BSNT_06077       865 TATGTTCGCTATCAGGAAGGAGAAACTGTTCCCCCTGTTTACATGATCAG    914
                     |||||.|||||||||||||||||.||||||||.|||||||||||||||||
RBAM_036600__   1051 TATGTCCGCTATCAGGAAGGAGATACTGTTCCGCCTGTTTACATGATCAG   1100

BSNT_06077       915 CAAATCGGATGTATCAAAATACTTCCATGTTAAGCTGAGCGGCCTGAAAA    964
                     |.||||||||||.||||.||||||||||||.||||||||||||||||||.
RBAM_036600__   1101 CGAATCGGATGTGTCAACATACTTCCATGTCAAGCTGAGCGGCCTGAAAC   1150

BSNT_06077       965 ATGATGAGGCTGTCTATTTCCCGGGAACGTATGACCGCAATTTCAAAAAC   1014
                     |||||||||||||||||||||||||.|||||||||||.||||||||||||
RBAM_036600__   1151 ATGATGAGGCTGTCTATTTCCCGGGCACGTATGACCGGAATTTCAAAAAC   1200

BSNT_06077      1015 GAAGCGCCGGATCAGCTGAAGCTGCTGAACCAAAAAGGGGAGCTGTCTGA   1064
                     .||||.||||||||||||||||||||||||||||||||..|||.||||||
RBAM_036600__   1201 AAAGCACCGGATCAGCTGAAGCTGCTGAACCAAAAAGGCAAGCCGTCTGA   1250

BSNT_06077      1065 TCAAAAACTGTCGGTAAAAGAAGTCAAAAAACCGCTGATCTCATTGAATG   1114
                     .|||||||||.|||||||||||.||.|||||||||||||.|||||.||||
RBAM_036600__   1251 ACAAAAACTGACGGTAAAAGAACTCGAAAAACCGCTGATTTCATTAAATG   1300

BSNT_06077      1115 CCATCATCGCGGTGAATGATCAAACCTTTGATCAGCTGAAATCACTCGGT   1164
                     ||||||||||||||||.||||||||||||||||||||.||||||||||||
RBAM_036600__   1301 CCATCATCGCGGTGAACGATCAAACCTTTGATCAGCTCAAATCACTCGGT   1350

BSNT_06077      1165 GATAAAGCGTCATTATACGGCTACAGCTATGATCATTGGAAAGACAGTCT   1214
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036600__   1351 GAAAAAGCGTCATTATACGGCTACAGCTATGATCATTGGAAAGACAGTCT   1400

BSNT_06077      1215 TGAGATCAGCCAATCCTTGCAAAATGAGATTTACGGCAATTATATCGACG   1264
                     ||.|.||||||||||..||.||.|||||||.||||||||.||||||||||
RBAM_036600__   1401 TGGGTTCAGCCAATCTCTGAAAGATGAGATCTACGGCAACTATATCGACG   1450

BSNT_06077      1265 TGCATTCTGATTTTGCTTCAAAAGCCGGGACTTACTATGATACGGTGCAG   1314
                     ||||||||||||||...||||||||||||||.||||||||||||||||||
RBAM_036600__   1451 TGCATTCTGATTTTATGTCAAAAGCCGGGACGTACTATGATACGGTGCAG   1500

BSNT_06077      1315 CTGCCGAGCTTGAGTTTATTTATCGGCCTGTTTATCGCAATTGTATTCTT   1364
                     |||||||||.||||||||||.|||||||||||||||||||||||||||||
RBAM_036600__   1501 CTGCCGAGCCTGAGTTTATTCATCGGCCTGTTTATCGCAATTGTATTCTT   1550

BSNT_06077      1365 TGTCGCGGCAGCAAGTTTCTTATATTTCAGGCTGTTCACTGATTTAGATG   1414
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_036600__   1551 TGTCGCGGCAGCAAGTTTCTTATATTTCAGGCTGTTCACAGATTTAGATG   1600

BSNT_06077      1415 AAGACCGGGAGCGCTACCGTTCACTGGCCAAAATCGGCCTGAGTGAGCGT   1464
                     |||||||||||||||||||||||.|||||||||||||.||||||||||||
RBAM_036600__   1601 AAGACCGGGAGCGCTACCGTTCATTGGCCAAAATCGGTCTGAGTGAGCGT   1650

BSNT_06077      1465 GAAATGGCACAAAGCGTGACAATACAATTGGCCATTCTTTTCTTCTTTCC   1514
                     ||||||||||||||||||||.|||||||||||.|||||.||.||||||||
RBAM_036600__   1651 GAAATGGCACAAAGCGTGACGATACAATTGGCGATTCTCTTTTTCTTTCC   1700

BSNT_06077      1515 ATTTGTCATTGCCGTCATGCATACACTGTTTGCCTTGAGAACATTGGCTG   1564
                     .||.||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_036600__   1701 TTTCGTCATTGCCGTCATGCATACACTGTTTGCCTTGAGAACATTGGCCG   1750

BSNT_06077      1565 TGGAAGGCTATTCCGATGTCGCGGGGCCGCTCAGTCTCACCATCGGAGGG   1614
                     |||||||||||||||||||.|||||||||||||||.||||.|||||||||
RBAM_036600__   1751 TGGAAGGCTATTCCGATGTAGCGGGGCCGCTCAGTTTCACTATCGGAGGG   1800

BSNT_06077      1615 TTTTTCATTTTTCAGCTTCTATTCTTCCTCGCGGTGCGGTCAAGCTATTT   1664
                     ||||||||||||||||||||.|||||||||.|.|||||||||||||||||
RBAM_036600__   1801 TTTTTCATTTTTCAGCTTCTGTTCTTCCTCACAGTGCGGTCAAGCTATTT   1850

BSNT_06077      1665 GAAAAAAATGAACAAGTAA   1683
                     |||||||||||||||||||
RBAM_036600__   1851 GAAAAAAATGAACAAGTAA   1869


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