Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06076 and RBAM_036590

See Amino acid alignment / Visit BSNT_06076 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06076___yxeA.1.9828.seq
#    -bsequence dna-align/RBAM_036590___yxeA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06076___yxeA-RBAM_036590___yxeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06076___yxeA-RBAM_036590___yxeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06076___yxeA
# 2: RBAM_036590___yxeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:     321/348 (92.2%)
# Similarity:   321/348 (92.2%)
# Gaps:           6/348 ( 1.7%)
# Score: 1510.5
# 
#
#=======================================

BSNT_06076___      1 ATGAAAAAAGCAATGGCAATCCTGGCC------GNGGCTGCTGCCGTAAT     44
                     ||||||||||||.||||||||||||||      | |||.||||||||.||
RBAM_036590__      1 ATGAAAAAAGCATTGGCAATCCTGGCCGTCTTGGCGGCCGCTGCCGTCAT     50

BSNT_06076___     45 ATGCGGGCTTCTCTTTTTTCATAACGATGTTACAGACAGATTTAATCCGT     94
                     ||.|||.|||||||||||||||||.|||||||||||||||||||||||||
RBAM_036590__     51 ATACGGACTTCTCTTTTTTCATAATGATGTTACAGACAGATTTAATCCGT    100

BSNT_06076___     95 TTATTCACCAGCAAGATGTCTATGTTCAGATTGATCGAGATGGCAGACAT    144
                     |||||||||||||||||||.|||||.|||||||||||||||||||.||||
RBAM_036590__    101 TTATTCACCAGCAAGATGTTTATGTACAGATTGATCGAGATGGCAAACAT    150

BSNT_06076___    145 CTTAGTCCGGGCGGTACTGAATATACATTAGACGGATATAATGCATCCGG    194
                     |||||.||||||||||||||.|||||||||||||||||.||.||||||||
RBAM_036590__    151 CTTAGCCCGGGCGGTACTGAGTATACATTAGACGGATACAACGCATCCGG    200

BSNT_06076___    195 GAAAAAAGAAGAAGTGACCTTTTTCGCCGGCAAAGAGCTTCGGAAGAACG    244
                     |||||||||||||||||||||||.|||||..|||||.|||||||||||||
RBAM_036590__    201 GAAAAAAGAAGAAGTGACCTTTTACGCCGCGAAAGACCTTCGGAAGAACG    250

BSNT_06076___    245 CGTATTTGAAGGTGAAGGCGAAAGGAAAGTATGTCGAGACTTGGGAAGAA    294
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_036590__    251 CGTATTTGAAGGTGAAGGCGAAAGGAAAGTATGTCGAGACCTGGGAAGAA    300

BSNT_06076___    295 GTCAAGTTTGAAGATATGCCGGACTCCGTACAGTCAAAATTAAAGTGA    342
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||
RBAM_036590__    301 GTCAGGTTTGAAGATATGCCGGGCTCCGTACAGTCAAAATTAAAGTGA    348


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