Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06067 and RBAM_036510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:33
# Commandline: needle
# -asequence dna-align/BSNT_06067___yxeG.1.9828.seq
# -bsequence dna-align/RBAM_036510___yxeG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06067___yxeG-RBAM_036510___yxeG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06067___yxeG-RBAM_036510___yxeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06067___yxeG
# 2: RBAM_036510___yxeG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity: 349/618 (56.5%)
# Similarity: 349/618 (56.5%)
# Gaps: 153/618 (24.8%)
# Score: 922.5
#
#
#=======================================
BSNT_06067___ 1 ATGAGAAATCAAAAAGCT---GAAAGACT----------GGTGGCAGCGG 37
||||||||| ||.||| ||.||||| ||||.||.||
RBAM_036510__ 1 ATGAGAAAT---AAGGCTGCCGACAGACTCGTTTTGACGGGTGTCATCG- 46
BSNT_06067___ 38 GGCTTGTTTTACATATCATTCAGTGGATATTTA-TATTATGGGCTTTTCT 86
|||||||||||||.||| |.||.| |.||||||...|||
RBAM_036510__ 47 ---------TACATATCATTCAATGG-TTTTCACTGTTATGGTTATTT-- 84
BSNT_06067___ 87 CAAAGTCAAACATTTAT--TTAGTGA------------CTATACGATCTA 122
||||| ||..||| .|.|||.||.||
RBAM_036510__ 85 ------------TTTATGCTTTTTGATCAGTTCGGGCGTTTTACCATTTA 122
BSNT_06067___ 123 TAACCCTAATGTCATCAGCGGCTCCATGCAGTCCTTATCGTTTATACAAA 172
.||.||.||||||.|||.|||...|||||||||.||.||.||..|..|.|
RBAM_036510__ 123 CAATCCCAATGTCGTCAACGGAAGCATGCAGTCTTTTTCATTCTTTGATA 172
BSNT_06067___ 173 TGATGCGCGCTATGATGTACTCAGGGGCAATC-GTGAATTA--------- 212
|||||||||||.|..|||..|| .||||..| |.|.|.||
RBAM_036510__ 173 TGATGCGCGCTCTTCTGTTTTC--CGGCACGCTGCGGAATACGCTCCTGC 220
BSNT_06067___ 213 TGTTT-TGTTTTTTGCCCTTGTATTGCTGATTTA----TGGCATAGCGCT 257
||||| |||||...||.| ||||.||||| |||...|.||||
RBAM_036510__ 221 TGTTTCTGTTTGCGGCGC------TGCTCATTTACTTGTGGGTGAACGCT 264
BSNT_06067___ 258 TCATGCCATCCTG---ATCGTTCTGGAAATGGCGGCTTACGTCATGATCA 304
||| |||.|.||||||||.|...||||..|||||||||
RBAM_036510__ 265 ----------CTGTTTATCCTGCTGGAAATCGTTTCTTATATCATGATCA 304
BSNT_06067___ 305 GGCGGAATCCATC--ATCTTCATGGGGGTTCTTTTTCATTGCGGCGGGTG 352
||||||| ||.| .||.|.|||||..|.||||..|...|||..|||..
RBAM_036510__ 305 GGCGGAA--CAGCCGTTCATTATGGGCATACTTTCCCGCAGCGATGGGAA 352
BSNT_06067___ 353 TGAAGCTTGCCATCTTGAATATAACCGGCATTCCATTT-TTAGCTGCCGG 401
|.|||||||||.|..||.|.|| |.||||..|||.||| ||.||.||.||
RBAM_036510__ 353 TAAAGCTTGCCCTTCTGGACAT-AGCGGCCGTCCCTTTCTTTGCGGCGGG 401
BSNT_06067___ 402 CTTTCTGCTGATGAAACAGAAAAAAGCAGAAAACGGCG----TCAAGGCA 447
..|..||||..||||.||||||| ||||..|||||| .||| ||.
RBAM_036510__ 402 GCTGATGCTCTTGAAGCAGAAAA---CAGATGACGGCGGCGAACAA-GCT 447
BSNT_06067___ 448 GAAAGAAAGCGGAA---ACCGCGCTTGCGTATCCGAAGACAAGGGCGTCG 494
|| .|||.|||| ||.||.| ||.|||||.||.|| |||...|
RBAM_036510__ 448 GA---CAAGGGGAAAAGACGGCCC---CGCATCCGGAGGCA--GGCCCGG 489
BSNT_06067___ 495 TCTA--AATAGAATTCGGAGAAAACCATCCCT--TCCGGTTGAATATCAA 540
|.|| ||.||||..|||||||| || ||||.||||
RBAM_036510__ 490 TTTACGAAGAGAAGGCGGAGAAA-------CTTGTCCGTTTGA------- 525
BSNT_06067___ 541 AAAGAAAAAACGATATGA 558
RBAM_036510__ 525 ------------------ 525
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