Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06047 and RBAM_036480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence dna-align/BSNT_06047___dra.1.9828.seq
# -bsequence dna-align/RBAM_036480___deoC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06047___dra-RBAM_036480___deoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06047___dra-RBAM_036480___deoC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06047___dra
# 2: RBAM_036480___deoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 686
# Identity: 517/686 (75.4%)
# Similarity: 517/686 (75.4%)
# Gaps: 31/686 ( 4.5%)
# Score: 1960.5
#
#
#=======================================
BSNT_06047___ 1 ATGTCATTAGCCAA--CATAATTGATCATACAGCTTTGAAACCGCATACA 48
||||||.|.| ||| || |||.||.|||||.||||||||||||||||||
RBAM_036480__ 1 ATGTCAATTG-CAAGTCA-AATAGACCATACTGCTTTGAAACCGCATACA 48
BSNT_06047___ 49 CAAAAAGCGGACATTCTAAAACTAATTGAAGAAGCGAAAACATACAAATT 98
||||||||.||.|||.||.||||.||..|||||||.|||..|||.|||||
RBAM_036480__ 49 CAAAAAGCTGATATTTTACAACTGATAAAAGAAGCAAAAGAATATAAATT 98
BSNT_06047___ 99 TGCTTCAGTATGTGTCAATCCGACATGGGTGGAGCTTGCTGCAAAAGAGC 148
.|||||.||.|||||.||.|||||.|||||..|.||.||.||..|.||.|
RBAM_036480__ 99 CGCTTCCGTTTGTGTAAACCCGACTTGGGTCAAACTCGCAGCGGAGGAAC 148
BSNT_06047___ 149 TTAAGGGAACTGGAGTCGACGTTTGTACGGTCATCGGCTTCCCGCTCGGT 198
|.||.||.||||||||.||||||||.||.||.|||||.||.||.|||||.
RBAM_036480__ 149 TGAAAGGCACTGGAGTTGACGTTTGCACCGTTATCGGATTTCCTCTCGGC 198
BSNT_06047___ 199 GCCAATACAACTGAAACAAAAGCGTTCGAAACAAAAGACGCGATTTCAAA 248
||.|..|||.|.|||||||||||.||.|||||.||.||.||.||.|||||
RBAM_036480__ 199 GCAACGACATCGGAAACAAAAGCATTTGAAACGAAGGATGCCATCTCAAA 248
BSNT_06047___ 249 AGGCGCCACTGAAGTGGATATGGTCATTAATATTGCCGCTTTAAAAGACA 298
|||.||.|||||.||.||.||||||||.|||||.|.|||.|||||||||.
RBAM_036480__ 249 AGGGGCAACTGAGGTTGACATGGTCATCAATATCGGCGCATTAAAAGACG 298
BSNT_06047___ 299 AGGAAGACGATGTGGTGGAAGCTGATATCCGCGGTGTAGTGGAAGCTGCA 348
..||.||.||.|.|||.||||||||||||||||..|||||.|||||.||.
RBAM_036480__ 299 GCGATGATGAAGCGGTTGAAGCTGATATCCGCGCGGTAGTTGAAGCAGCT 348
BSNT_06047___ 349 GCCGGAAAAGCGCTTGTCAAAGTCATTATCGAAACGTGCCTTCTGACTGA 398
|....|||||||||.||||||||.||.||||||||.||||||.||||.||
RBAM_036480__ 349 GATAAAAAAGCGCTCGTCAAAGTGATCATCGAAACATGCCTTTTGACAGA 398
BSNT_06047___ 399 TGAAGAAAAAGAACGTGCATGCCGTTTAGCGGTGTCTGCGGGAGCGGATT 448
||||||||||||.||.||.|||||.||.|||||.||.||.||.||.||||
RBAM_036480__ 399 TGAAGAAAAAGAGCGCGCGTGCCGCTTGGCGGTATCCGCAGGCGCAGATT 448
BSNT_06047___ 449 TCGTAAAAACATCAACAGGCTTTTCTACAGGCGGCGCAACGAAGGAAGAT 498
||||.|||||.||.||.||.||||||||||||||.||||||...|||||.
RBAM_036480__ 449 TCGTCAAAACGTCTACCGGTTTTTCTACAGGCGGGGCAACGGCTGAAGAC 498
BSNT_06047___ 499 ATCGCCTTAATGCGCAAAACAGTAGGACCTGATATCGGCGTGAAAGCATC 548
||.||..|.|||.|.||||||||.||||||||.|||||.||.||||||||
RBAM_036480__ 499 ATTGCTCTCATGAGAAAAACAGTCGGACCTGACATCGGGGTCAAAGCATC 548
BSNT_06047___ 549 TGGCGGAATCAGAACGAAAGAAGATGTAGACACAATGGTTGAGGCTGGTG 598
.|||||.||||||||.||||..|||||.||||..|||.|.|..||.||.|
RBAM_036480__ 549 AGGCGGCATCAGAACAAAAGCTGATGTTGACAGCATGATCGCTGCGGGCG 598
BSNT_06047___ 599 CAAGCCGAATTGGCGCCAGCGCAGGCGTTTCTATCGTAAAAGGAGAAAAT 648
|.|||||.||.|||||.||.||.|||||.|||||||| |||
RBAM_036480__ 599 CGAGCCGGATCGGCGCAAGTGCGGGCGTCTCTATCGT-----GAG----- 638
BSNT_06047___ 649 GCATCAGGCGGAGACA------------ACTATTAA 672
.|||||||||| ||||||||
RBAM_036480__ 639 -----CGGCGGAGACAGCGGCAGCAGCGACTATTAA 669
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