Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06045 and RBAM_036470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence dna-align/BSNT_06045___nupC.1.9828.seq
# -bsequence dna-align/RBAM_036470___nupC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06045___nupC-RBAM_036470___nupC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06045___nupC-RBAM_036470___nupC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06045___nupC
# 2: RBAM_036470___nupC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1193
# Identity: 917/1193 (76.9%)
# Similarity: 917/1193 (76.9%)
# Gaps: 22/1193 ( 1.8%)
# Score: 3434.5
#
#
#=======================================
BSNT_06045___ 1 ATGAAGTATTTGATTGGGATTATCGGTTTAATCGTGTTTTTAGGCCTCGC 50
|||||||||.|.||.||.||||||||..|.||.|||||||||||.||.||
RBAM_036470__ 1 ATGAAGTATCTCATCGGAATTATCGGAATCATTGTGTTTTTAGGTCTTGC 50
BSNT_06045___ 51 GTGGATCGCGAGCAGCGGCAAAAAAAGAATTAAGATCCGCCCAATTGTTG 100
.|||.|.||.||||.|||||||||||||||.|..|||||.||.||.|..|
RBAM_036470__ 51 CTGGCTTGCCAGCAACGGCAAAAAAAGAATCAGAATCCGGCCGATCGCCG 100
BSNT_06045___ 101 TTATGCTCATTTTGCAATTTATTCTTGGCTACATTCTCCTCAATACCGGG 150
|.||||||.|..||||..|.|||||.||.||.|||||||||||.|||||.
RBAM_036470__ 101 TCATGCTCGTGCTGCAGCTGATTCTCGGTTATATTCTCCTCAACACCGGT 150
BSNT_06045___ 151 ATAGGGAATTTCCTCGTAGGAGGATTTGCAAAAGGTTTCGGTTACCTGCT 200
||.||||||||.||.||.||.||.|||||||||||.||....|||.||||
RBAM_036470__ 151 ATCGGGAATTTTCTTGTCGGCGGTTTTGCAAAAGGATTTAACTACTTGCT 200
BSNT_06045___ 201 TGAATACGCGGCAGAGGGAATTAACTTTGTGTTTGGC-GGCTTGGTGAAT 249
.|||||.||..||||.||.|||||||||||.||.||| ||||| |||||.
RBAM_036470__ 201 GGAATATGCATCAGAAGGGATTAACTTTGTATTCGGCGGGCTT-GTGAAC 249
BSNT_06045___ 250 GCGGACCAAACGACATTCTTTATGAATGTTCTCTTGCCAATCGTGTTTAT 299
|||.|.||.|||||.|||||.||||..||.||..||||.|||||.|||||
RBAM_036470__ 250 GCGAAACAGACGACGTTCTTCATGAGCGTGCTTCTGCCGATCGTCTTTAT 299
BSNT_06045___ 300 TTCCGCTCTGATCGGGATTCTGCAAAAGTGGAAAGTCCTCCCGTTTATCA 349
.||||||.|.|||||.||||||||..|.|||||.||||||||.||.||||
RBAM_036470__ 300 ATCCGCTTTAATCGGAATTCTGCAGCATTGGAAGGTCCTCCCCTTCATCA 349
BSNT_06045___ 350 TTAGATATATCGGCCTTGCCCTCAGCAAGGTAAACGGTATGGGAAGATTG 399
..|..||||||||.|||||..|.||||||||.|||||.|||||.|.|.|.
RBAM_036470__ 350 CGAAGTATATCGGTCTTGCGTTAAGCAAGGTGAACGGAATGGGGAAAATC 399
BSNT_06045___ 400 GAATCGTATAACGCAGTGGCTTCTGCGATTTTAGGGCAGTCAGAAGTATT 449
|||||.||.|||||.||.||.||.||||||||||||||.||||||||.||
RBAM_036470__ 400 GAATCTTACAACGCTGTCGCATCCGCGATTTTAGGGCAATCAGAAGTCTT 449
BSNT_06045___ 450 TATCTCCTTGAAGAAAGAACTCGGTCTTTTAAATCAGCAGCGCTTGTACA 499
||||...|||||.|||.|.||||||..|.|.|.|.|.||||||||.||.|
RBAM_036470__ 450 TATCAGTTTGAAAAAACAGCTCGGTTATCTTACTGAACAGCGCTTATATA 499
BSNT_06045___ 500 CGCTTTGCGCATCTGCGATGTCAACTGTATCAATGTCGATTGTCGGCGCG 549
|||||||||||||.||.|||||.||.||.|||||||||||.|||||..|.
RBAM_036470__ 500 CGCTTTGCGCATCCGCAATGTCGACGGTTTCAATGTCGATCGTCGGTTCT 549
BSNT_06045___ 550 TATATGACAATGCTGAAACCGGAATATGTTGTAACAGCGCTTGTTTTGAA 599
||.||||..||||||||.||.|||||.||.||.||.||||||||..||||
RBAM_036470__ 550 TACATGATGATGCTGAAGCCTGAATACGTCGTGACGGCGCTTGTGCTGAA 599
BSNT_06045___ 600 CTTATTTGGCGGTTTCATTATCGCTTCTATTATCAATCCGTACGAGGTTG 649
||||||.|||||.||.||.|||||||||||.|||||.||||||...||
RBAM_036470__ 600 CTTATTCGGCGGATTTATCATCGCTTCTATCATCAACCCGTACACCGT-- 647
BSNT_06045___ 650 CA--AAAGAAGAGGATATGCTTCGT-GTTGAGGAAGAAGAAAAACAATCC 696
|| ||||||||||||.|| .|||| |||...|||||||||||.||||||
RBAM_036470__ 648 CAGCAAAGAAGAGGATTTG-ATCGTCGTTCCTGAAGAAGAAAAGCAATCC 696
BSNT_06045___ 697 TTCTTCGAAGTGCTCGGAGAATACATTCTTGACGGTTTCAAAGTAGCGGT 746
||.||.|||||||||||.||.||.||..|.||.||.||||.|||.||.||
RBAM_036470__ 697 TTTTTTGAAGTGCTCGGTGAGTATATAATGGATGGATTCAGAGTCGCCGT 746
BSNT_06045___ 747 TGTCGTCGCTGCGATGCTGATTGGATTTGTCGCGATTATTGCCTTGATCA 796
.|||||.||.|||||||||||.|||||||||||..|.|||||..||.|||
RBAM_036470__ 747 CGTCGTAGCGGCGATGCTGATCGGATTTGTCGCACTCATTGCTCTGGTCA 796
BSNT_06045___ 797 ATGGCATTTTTAATGCAGTATTCGGTATTTCGTTCCAAGGC-ATTCTTGG 845
|.|||.||||.||.||.||.|||||.|||.|.|||| |||| .|.||.||
RBAM_036470__ 797 ACGGCGTTTTCAACGCGGTCTTCGGCATTACATTCC-AGGCGCTGCTCGG 845
BSNT_06045___ 846 ATATGTGTTTGCTCCATTCGCTTTTCTTGTGGGTATCCCATGGAATGAAG 895
||||||.||.||.||.||.||.|||.|....|||||.||.||||||||||
RBAM_036470__ 846 ATATGTCTTCGCGCCGTTTGCGTTTTTAACCGGTATTCCGTGGAATGAAG 895
BSNT_06045___ 896 CTGTTAATGCGGGAAGCATTATGGCAACAAAAATGGTATCGAATGAATTT 945
|.||.|..||.||||||||||||||.||.|||||||||||||||||||||
RBAM_036470__ 896 CGGTGAGCGCCGGAAGCATTATGGCGACGAAAATGGTATCGAATGAATTT 945
BSNT_06045___ 946 GTCGCCATG-----ACGTCGCTTACGCAAAACGGTTTCCATTTCAGCGGC 990
||.||.||| || ||.|.|.|| .||.||||||||||||.|..
RBAM_036470__ 946 GTGGCGATGCAGACAC-TCTCATCCG----GCGATTTCCATTTCAGTGCG 990
BSNT_06045___ 991 CGTACAACA-GCGATCGTATCGGTATTCCTTGTGTCCTTTGCGAACTTCT 1039
|.||| ||| ||..|.|||||.|||||||||||.||.||.|||||.||||
RBAM_036470__ 991 CATAC-ACAGGCAGTGGTATCTGTATTCCTTGTCTCATTCGCGAATTTCT 1039
BSNT_06045___ 1040 CCTCAATCGGAATCATTGCCGGTGCCGTAAAAGGACTGAATGAAAAGCAA 1089
||||.||||||||||||.|||||||.||.|||||.|||.|||||||.|||
RBAM_036470__ 1040 CCTCTATCGGAATCATTACCGGTGCGGTGAAAGGGCTGCATGAAAAACAA 1089
BSNT_06045___ 1090 GGAAATGTCGTCGCTCGTTTCGGCTTGAAATTATTATACGGTGCTACGCT 1139
|||||.||||||||.||.|||||..||||..|..|.|||||.||.|||||
RBAM_036470__ 1090 GGAAACGTCGTCGCGCGGTTCGGGCTGAAGCTGCTGTACGGCGCAACGCT 1139
BSNT_06045___ 1140 TGTCAGCTTTTTATCAGCAGCAATTGTGGGCTTGATTTACTGA 1182
.||||||||..|..||||.||.||.||.||.||||||.|||||
RBAM_036470__ 1140 CGTCAGCTTCCTGACAGCGGCGATCGTCGGATTGATTCACTGA 1182
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